RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 FAM53BQ14153 422 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 BECN1Q14457 450 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 EXOC3L2Q2M3D2 409 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 KLHL22Q53GT1 634 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 AGAP6Q5VW22 663 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 TAF3Q5VWG9 929 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 ASPHD2Q6ICH7 369 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 LEG1Q6P5S2 330 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 SUSD1Q6UWL2 747 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 KRBA2Q6ZNG9 492 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 RCOR2Q8IZ40 523 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 ARHGEF39Q8N4T4 335 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 GOLM1Q8NBJ4 401 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 APCDD1LQ8NCL9 501 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 NFAM1Q8NET5 270 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-206ENST00000471968 OR6P1Q8NGX9 317 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 ASZ1Q8WWH4 475 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 WFDC12Q8WWY7 111 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 SYN2Q92777 582 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-206ENST00000471968 WNT2BQ93097 391 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 DCUN1D1Q96GG9 259 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 PAGE5Q96GU1 130 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 FOXN4Q96NZ1 517 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 USP28Q96RU2 1077 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 RASL10BQ96S79 203 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 RBM22Q9NW64 420 aaKnown RBP eCLIP5.94□□□□□ -1.461e-6■■■□□ 15.8
HDAC3-206ENST00000471968 SYBUQ9NX95 663 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 QPCTLQ9NXS2 382 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 SAMD15Q9P1V8 674 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 RUVBL2Q9Y230 463 aaKnown RBP5.94□□□□□ -1.46
HDAC3-206ENST00000471968 SPO11Q9Y5K1 396 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.94□□□□□ -1.46
HDAC3-206ENST00000471968 PRR14LQ5THK1 2151 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 NCKAP5O14513 1909 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 LRRD1A4D1F6 860 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 SGK494L7N484 410 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 NDUFS8O00217 210 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 WWP2O00308 870 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 VPS26AO75436 327 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 KNG1P01042 644 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 HLA-DQB2P05538 268 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 MMP2P08253 660 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 KRT3P12035 628 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 OMGP23515 440 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 ZNF165P49910 485 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 EFNA4P52798 201 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 CDH15P55291 814 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 C21orf58P58505 322 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 SIRPAP78324 504 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 SRYQ05066 204 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 NAA25Q14CX7 972 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 C8orf34Q49A92 452 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 ZNF658BQ4V348 819 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-206ENST00000471968 PRAMEF20Q5VT98 475 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 FOXD4L5Q5VV16 416 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-206ENST00000471968 NAA35Q5VZE5 725 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 CLEC17AQ6ZS10 378 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 ATG4DQ86TL0 474 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-206ENST00000471968 BPIFB2Q8N4F0 458 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 ZNF610Q8N9Z0 462 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 MCOLN3Q8TDD5 553 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 FOXD4L4Q8WXT5 416 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-206ENST00000471968 PEX11GQ96HA9 241 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 TBX15Q96SF7 602 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 CITED1Q99966 193 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 TACO1Q9BSH4 297 aaKnown RBP5.93□□□□□ -1.46
HDAC3-206ENST00000471968 TRIM2Q9C040 744 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 BPESC1Q9GZL8 116 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 ETNK2Q9NVF9 386 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 SMOXQ9NWM0 555 aa5.93□□□□□ -1.46
HDAC3-206ENST00000471968 ZNF223Q9UK11 482 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-206ENST00000471968 PLXNB1O43157 2135 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 H0Y3Z8 333 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 P2RX6O15547 441 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 BUD23O43709 281 aaKnown RBP5.92□□□□□ -1.46
HDAC3-206ENST00000471968 STK10O94804 968 aaKnown RBP5.92□□□□□ -1.46
HDAC3-206ENST00000471968 NSA2O95478 260 aaKnown RBP5.92□□□□□ -1.46
HDAC3-206ENST00000471968 ACSL3O95573 720 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 IL1RNP18510 177 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 ACADLP28330 430 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 HMGCLP35914 325 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 FKBP3Q00688 224 aaKnown RBP5.92□□□□□ -1.46
HDAC3-206ENST00000471968 PLOD1Q02809 727 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-206ENST00000471968 PTP4A2Q12974 167 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 BRD3Q15059 726 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 STK38Q15208 465 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 CYP1B1Q16678 543 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 NDUFA9Q16795 377 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 NCMAPQ5T1S8 102 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 ZDHHC20Q5W0Z9 365 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 C11orf71Q6IPW1 123 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 TMCO3Q6UWJ1 677 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 PCGF5Q86SE9 256 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 GLCCI1Q86VQ1 547 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 GRAMD2AQ8IUY3 354 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 B3GNT7Q8NFL0 401 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 OR2L3Q8NG85 312 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 ZNF398Q8TD17 642 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 DTX3LQ8TDB6 740 aa5.92□□□□□ -1.46
HDAC3-206ENST00000471968 SGCDQ92629 289 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 1202.8 ms