RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 EVI2BP34910 448 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 NFATC2Q13469 925 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 RAB6CQ53S08 254 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 BEND4Q6ZU67 534 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 TICAM1Q8IUC6 712 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 MCEMP1Q8IX19 187 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 GNPDA2Q8TDQ7 276 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 PEX13Q92968 403 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 SECISBP2Q96T21 854 aaKnown RBP11.64□□□□□ -0.55
UBR4-205ENST00000417040 TSNAXQ99598 290 aaKnown RBP11.64□□□□□ -0.55
UBR4-205ENST00000417040 CCM2Q9BSQ5 444 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 RAB6CQ9H0N0 254 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 OR2S2Q9NQN1 319 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 C14orf166Q9Y224 244 aaKnown RBP11.64□□□□□ -0.55
UBR4-205ENST00000417040 H0YJX3 145 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 CAPN5O15484 640 aaPredicted RBP11.64□□□□□ -0.55
UBR4-205ENST00000417040 PI15O43692 258 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 KELP23276 732 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 CDKN2DP55273 166 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 RAB8AP61006 207 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 GK3PQ14409 553 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 DLK2Q6UY11 383 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 ASRGL1Q7L266 308 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 OSTM1Q86WC4 334 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 NRSN1Q8IZ57 195 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 OR5T2Q8NGG2 359 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 FRS2Q8WU20 508 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 ATG5Q9H1Y0 275 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 SARDHQ9UL12 918 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 HCN4Q9Y3Q4 1203 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 H0YAE9 185 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 DENRO43583 198 aaKnown RBP11.64□□□□□ -0.55
UBR4-205ENST00000417040 BEST1O76090 585 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 H2AFB2P0C5Z0 115 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 OR12D1P0DN82 309 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 BMP8BP34820 402 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 OPRL1P41146 370 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 FAM180BQ6P0A1 224 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 USP50Q70EL3 339 aaPredicted RBP11.64□□□□□ -0.55
UBR4-205ENST00000417040 BMP8AQ7Z5Y6 402 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 OR6Q1Q8NGQ2 317 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 CMTM7Q96FZ5 175 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 FZD8Q9H461 694 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 MEAF6Q9HAF1 191 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 A0A0D9SEW6 157 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 PABPC4LP0CB38 370 aaKnown RBP11.63□□□□□ -0.55
UBR4-205ENST00000417040 ABRAXAS2Q15018 415 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 HYAL4Q2M3T9 481 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 HSD17B12Q53GQ0 312 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 KRBOX4Q5JUW0 171 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 CEACAM19Q7Z692 300 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 ZNF384Q8TF68 577 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 FBXL18Q96ME1 805 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 HDHD5Q9BXW7 423 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 EIF5A2Q9GZV4 153 aaKnown RBP11.63□□□□□ -0.55
UBR4-205ENST00000417040 SUV39H2Q9H5I1 410 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 ABCD2Q9UBJ2 740 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 PCDH17O14917 1159 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 GDPD4Q6W3E5 623 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 COMTD1Q86VU5 262 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 SLC35F5Q8WV83 523 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 CAMK1GQ96NX5 476 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 CD180Q99467 661 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 PEAK1Q9H792 1746 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 GSTT2P0CG29 244 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 CSNK2A2P19784 350 aaPredicted RBP11.63□□□□□ -0.55
UBR4-205ENST00000417040 NAA10P41227 235 aaPredicted RBP11.63□□□□□ -0.55
UBR4-205ENST00000417040 LASP1Q14847 261 aaKnown RBP11.63□□□□□ -0.55
UBR4-205ENST00000417040 SLC36A3Q495N2 470 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 GXYLT1Q4G148 440 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 ANKHQ9HCJ1 492 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 POT1Q9NUX5 634 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 EMC3Q9P0I2 261 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 LAMP5Q9UJQ1 280 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 SLIT3O75094 1523 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 A0A1W2PRU2 124 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 BPNT1O95861 308 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 PENKP01210 267 aaPredicted RBP11.63□□□□□ -0.55
UBR4-205ENST00000417040 DNAJB13P59910 316 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 RPS26P62854 115 aaKnown RBP11.63□□□□□ -0.55
UBR4-205ENST00000417040 SLC10A2Q12908 348 aaPredicted RBP11.63□□□□□ -0.55
UBR4-205ENST00000417040 NFATC3Q12968 1075 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 PDGFRLQ15198 375 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 KLBQ86Z14 1044 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 WDR20Q8TBZ3 569 aa11.63□□□□□ -0.55
UBR4-205ENST00000417040 TRUB1Q8WWH5 349 aaKnown RBP11.63□□□□□ -0.55
UBR4-205ENST00000417040 C7orf50Q9BRJ6 194 aaKnown RBP11.63□□□□□ -0.55
UBR4-205ENST00000417040 RANBP3Q9H6Z4 567 aaPredicted RBP11.63□□□□□ -0.55
UBR4-205ENST00000417040 IGKV6D-41A0A0C4DH26 115 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 SSTR4P31391 388 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 ABHD18Q0P651 414 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 ST3GAL3Q11203 375 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 PAFAH1B3Q15102 231 aaKnown RBP11.62□□□□□ -0.55
UBR4-205ENST00000417040 AMZ1Q400G9 498 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 OTOP2Q7RTS6 562 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 GATSQ8NAP1 163 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 KIAA1191Q96A73 305 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 SCRN2Q96FV2 425 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 SEZ6LQ9BYH1 1024 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 NEUROD4Q9HD90 331 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms