RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 CTRCQ99895 268 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 FBXL12Q9NXK8 326 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 B4GALT6Q9UBX8 382 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 TRBC2A0A5B9 178 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 FRS3O43559 492 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 TSPAN6O43657 245 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 CDK1P06493 297 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 PSKH1P11801 424 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 SRCP12931 536 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 CALHM3Q86XJ0 350 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 TTTY10Q9BZA0 68 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 RPRD1BQ9NQG5 326 aaKnown RBP16.07■□□□□ 0.16
SIPA1-201ENST00000394224 MIEF1Q9NQG6 463 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 TRIOO75962 3097 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 TRBV5-3A0A0A0MS03 114 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 SEPT4O43236 478 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 NSG1P42857 185 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 UGT2B15P54855 530 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 RAB15P59190 212 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 RETSATQ6NUM9 610 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 SLC46A3Q7Z3Q1 461 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 TRMT11Q7Z4G4 463 aaKnown RBP16.07■□□□□ 0.16
SIPA1-201ENST00000394224 TBC1D17Q9HA65 648 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 BEX1Q9HBH7 125 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 TEKT2Q9UIF3 430 aa16.07■□□□□ 0.16
SIPA1-201ENST00000394224 TRBV4-1A0A0J9YWV2 114 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 PRAMEF25A6NGN4 478 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 C5orf58C9J3I9 102 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 HAT1O14929 419 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 S100A1P23297 94 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 CTSCP53634 463 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 WNT3P56703 355 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 MTFR2Q6P444 385 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 CBLL1Q75N03 491 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 PEX13Q92968 403 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 UROC1Q96N76 676 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 DOHHQ9BU89 302 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 IRF2BPLQ9H1B7 796 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 SNX11Q9Y5W9 270 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 CACNA1IQ9P0X4 2223 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 ARID1AO14497 2285 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 PRPS2P11908 318 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 PEPDP12955 493 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 SERPINA4P29622 427 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 TARDBPQ13148 414 aaKnown RBP eCLIP16.06■□□□□ 0.16
SIPA1-201ENST00000394224 PIN1Q13526 163 aaPredicted RBP16.06■□□□□ 0.16
SIPA1-201ENST00000394224 NPAS3Q8IXF0 933 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 TIGD4Q8IY51 512 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 XAGE5Q8WWM1 108 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 USP7Q93009 1102 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 YME1L1Q96TA2 773 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 WFDC6Q9BQY6 131 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 SYT17Q9BSW7 474 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 NTMT1Q9BV86 223 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 ANKRA2Q9H9E1 313 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 SH2B3Q9UQQ2 575 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 GABRR2P28476 465 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 ATP6V1E1P36543 226 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 CDC42P60953 191 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 LMAN2Q12907 356 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 KEAP1Q14145 624 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 FXNQ16595 210 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 USP30Q70CQ3 517 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 DNAJB7Q7Z6W7 309 aaPredicted RBP16.06■□□□□ 0.16
SIPA1-201ENST00000394224 TRAPPC5Q8IUR0 188 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 GATAD2BQ8WXI9 593 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 NEIL2Q969S2 332 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 TMEM159Q96B96 161 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 ITPKCQ96DU7 683 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 TBX5Q99593 518 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 C2orf49Q9BVC5 232 aaPredicted RBP16.06■□□□□ 0.16
SIPA1-201ENST00000394224 QRSL1Q9H0R6 528 aaKnown RBP16.06■□□□□ 0.16
SIPA1-201ENST00000394224 KCNK12Q9HB15 430 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 MARCH5Q9NX47 278 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 TRPS1Q9UHF7 1281 aa16.06■□□□□ 0.16
SIPA1-201ENST00000394224 SPIN1Q9Y657 262 aaPredicted RBP16.06■□□□□ 0.16
SIPA1-201ENST00000394224 CYP2A7P20853 494 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 MAPK1P28482 360 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 INPP1P49441 399 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 C5orf22Q49AR2 442 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 ZC3H12BQ5HYM0 836 aaKnown RBP16.05■□□□□ 0.16
SIPA1-201ENST00000394224 AGTRAPQ6RW13 159 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 LHFPL3Q86UP9 236 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 MMAAQ8IVH4 418 aaKnown RBP16.05■□□□□ 0.16
SIPA1-201ENST00000394224 EXOSC8Q96B26 276 aaKnown RBP16.05■□□□□ 0.16
SIPA1-201ENST00000394224 PCDHB11Q9Y5F2 797 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 NEDD8-MDP1E9PL57 170 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 PLOD3O60568 738 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 CCNB2O95067 398 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 IGLV3-27P01718 113 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 CYP17A1P05093 508 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 GGT2P36268 569 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 PTSQ03393 145 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 SPATS1Q496A3 300 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 ASB18Q6ZVZ8 466 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 CFAP206Q8IYR0 622 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 C7orf34Q96L11 122 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 RIOK2Q9BVS4 552 aaKnown RBP16.05■□□□□ 0.16
SIPA1-201ENST00000394224 ATG2BQ96BY7 2078 aa16.05■□□□□ 0.16
SIPA1-201ENST00000394224 DOCK4Q8N1I0 1966 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms