RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 FESP07332 822 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 ETS2P15036 469 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 RPS3P23396 243 aaKnown RBP eCLIP11.69□□□□□ -0.541e-9■□□□□ 10.1
PCF11-201ENST00000298281 CDK3Q00526 305 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 FAM174BQ3ZCQ3 159 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 SPIN4Q56A73 249 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 LPCAT4Q643R3 524 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 CYP2U1Q7Z449 544 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 PCED1BQ96HM7 432 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 POLR2J3Q9H1A7 115 aaKnown RBP11.69□□□□□ -0.54
PCF11-201ENST00000298281 PREX1Q8TCU6 1659 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 TGM6O95932 706 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 C6P13671 934 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 PRPH2P23942 346 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 CCND3P30281 292 aaPredicted RBP11.69□□□□□ -0.54
PCF11-201ENST00000298281 ERVK-8P63133 956 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 CRB2Q5IJ48 1285 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 TNFAIP8L2Q6P589 184 aaPredicted RBP11.69□□□□□ -0.54
PCF11-201ENST00000298281 LINGO4Q6UY18 593 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 ZNF367Q7RTV3 350 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 BPIFB1Q8TDL5 484 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 LENG8Q96PV6 779 aaPredicted RBP11.69□□□□□ -0.54
PCF11-201ENST00000298281 CXorf21Q9HAI6 301 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 COQ9O75208 318 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 GJB1P08034 283 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 CSNK2A2P19784 350 aaPredicted RBP11.68□□□□□ -0.54
PCF11-201ENST00000298281 HADHBP55084 474 aaKnown RBP11.68□□□□□ -0.54
PCF11-201ENST00000298281 TAS2R39P59534 338 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 CLEC6AQ6EIG7 209 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 C6orf120Q7Z4R8 191 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 C1orf127Q8N9H9 656 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 RGMAQ96B86 450 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 KATNBL1Q9H079 304 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 PRELID1Q9Y255 219 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 ENTPD6O75354 484 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 GRIA2P42262 883 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 CX3CR1P49238 355 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 CLCNKBP51801 687 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 ECT2LQ008S8 904 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 GHRHRQ02643 423 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 GDF6Q6KF10 455 aaPredicted RBP11.68□□□□□ -0.54
PCF11-201ENST00000298281 TMEM214Q6NUQ4 689 aaKnown RBP11.68□□□□□ -0.54
PCF11-201ENST00000298281 RFWD3Q6PCD5 774 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 CAMKVQ8NCB2 501 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 P2RX2Q9UBL9 471 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 PCDHGC4Q9Y5F7 938 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 CPQQ9Y646 472 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 C11orf98E9PRG8 122 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 SLC1A7O00341 560 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 ARHGEF15O94989 841 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 OR4F21O95013 312 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 DAOAP59103 153 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 DECR1Q16698 335 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 LIN52Q52LA3 116 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 EGFLAMQ63HQ2 1017 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 KIAA0895LQ68EN5 471 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 LILRB2Q8N423 598 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 NR4A3Q92570 626 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 RRNAD1Q96FB5 475 aaKnown RBP11.68□□□□□ -0.54
PCF11-201ENST00000298281 MAGEE1Q9HCI5 957 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 COL5A2P05997 1499 aaPredicted RBP11.68□□□□□ -0.54
PCF11-201ENST00000298281 MATN2O00339 956 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 INPPL1O15357 1258 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 TREHO43280 583 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 LGR5O75473 907 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 DIRAS3O95661 229 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 GKN2Q86XP6 184 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 FAM86B1Q8N7N1 296 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 HDAC2Q92769 488 aaKnown RBP11.68□□□□□ -0.54
PCF11-201ENST00000298281 SH3YL1Q96HL8 342 aaPredicted RBP11.68□□□□□ -0.54
PCF11-201ENST00000298281 PWWP2AQ96N64 755 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 CARS2Q9HA77 564 aaKnown RBP11.68□□□□□ -0.54
PCF11-201ENST00000298281 ATRNO75882 1429 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 WNT9AO14904 365 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 HTR1AP08908 422 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 AMY2BP19961 511 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 AKR1C2P52895 323 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 PSMA6P60900 246 aaKnown RBP11.68□□□□□ -0.54
PCF11-201ENST00000298281 SCAPQ12770 1279 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 WSCD2Q2TBF2 565 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 RAET1LQ5VY80 246 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 KIF18BQ86Y91 864 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 PHC2Q8IXK0 858 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 OR2T27Q8NH04 317 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 ABRACLQ9P1F3 81 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 SCP2D1Q9UJQ7 156 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 FTCDNL1E5RQL4 147 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 H7C2Y5 167 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 CREBL2O60519 120 aaPredicted RBP11.68□□□□□ -0.54
PCF11-201ENST00000298281 JUPP14923 745 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 SEC23BQ15437 767 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 ZNF718Q3SXZ3 478 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 FBXO43Q4G163 708 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 TTLL10Q6ZVT0 673 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 RSPRY1Q96DX4 576 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 SLC25A44Q96H78 314 aaPredicted RBP11.68□□□□□ -0.54
PCF11-201ENST00000298281 YTHDF1Q9BYJ9 559 aaKnown RBP11.68□□□□□ -0.54
PCF11-201ENST00000298281 MYNNQ9NPC7 610 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 CYP8B1Q9UNU6 501 aa11.68□□□□□ -0.54
PCF11-201ENST00000298281 ST14Q9Y5Y6 855 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms