RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 WSCD2Q2TBF2 565 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 SLC36A3Q495N2 470 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 KIAA0319Q5VV43 1072 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 KANK2Q63ZY3 851 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 LINGO2Q7L985 606 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 ASPNQ9BXN1 380 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 RBCK1Q9BYM8 510 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 CDH7Q9ULB5 785 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 CRYBG1Q9Y4K1 1723 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 GMFBP60983 142 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 EXOC3L2Q2M3D2 409 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 LIPKQ5VXJ0 399 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 ADNP2Q6IQ32 1131 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 NCEH1Q6PIU2 408 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 CELF5Q8N6W0 485 aaKnown RBP16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 MDGA1Q8NFP4 955 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 MYLIPQ8WY64 445 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 CRELD1Q96HD1 420 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 WACQ9BTA9 647 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 PAK1IP1Q9NWT1 392 aaPredicted RBP16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 MED31Q9Y3C7 131 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 LATO43561 262 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 AKAP8O43823 692 aaKnown RBP16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 SLC6A4P31645 630 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 ODF4Q2M2E3 257 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 ZNF805Q5CZA5 627 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 SLC25A24Q6NUK1 477 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.5■□□□□ 0.235e-10■■■□□ 19.1
SLC1A4-201ENST00000234256 LARP4Q71RC2 724 aaKnown RBP eCLIP16.5■□□□□ 0.236e-8■■■□□ 15.8
SLC1A4-201ENST00000234256 ZNF551Q7Z340 670 aaPredicted RBP16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 KLHL36Q8N4N3 616 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 TTLQ8NG68 377 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 C1orf216Q8TAB5 229 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 ZNF675Q8TD23 568 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 NETO1Q8TDF5 533 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 ZSWIM3Q96MP5 696 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 DOHHQ9BU89 302 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 CPNE3O75131 537 aaKnown RBP16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 KRT33AO76009 404 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 DBIP07108 87 aaKnown RBP16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 GIMD1P0DJR0 217 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 CCL5P13501 91 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 MATN1P21941 496 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 GPX3P22352 226 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 FBXO43Q4G163 708 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 HACD2Q6Y1H2 254 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 LHFPL3Q86UP9 236 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 MGLLQ99685 303 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 RMI1Q9H9A7 625 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 TCF7L1Q9HCS4 588 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 UBR2Q8IWV8 1755 aa16.5■□□□□ 0.23
SLC1A4-201ENST00000234256 UNCXA6NJT0 531 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 PSMD9O00233 223 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 SLC1A7O00341 560 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 GFOD2Q3B7J2 385 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 ALKBH2Q6NS38 261 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 TMEM125Q96AQ2 219 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 RDH12Q96NR8 316 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 KCNK12Q9HB15 430 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 CREBZFQ9NS37 354 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 AKAP7Q9P0M2 348 aaPredicted RBP16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 JUPP14923 745 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 SLC9A3P48764 834 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 BMXP51813 675 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 ST3GAL3Q11203 375 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 C10orf62Q5T681 223 aaPredicted RBP16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 IRAK1BP1Q5VVH5 260 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 LIPJQ5W064 366 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 DNAJA3Q96EY1 480 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 MCHR1Q99705 422 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 SLC30A2Q9BRI3 323 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 ANKHQ9HCJ1 492 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 CKLFQ9UBR5 152 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 EDDM13A0A1B0GTR0 161 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 ECDO95905 644 aaPredicted RBP16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 SRPRAP08240 638 aaKnown RBP16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 FSHRP23945 695 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 FAUP35544 74 aaKnown RBP16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 OR52E8Q6IFG1 317 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 ZNF613Q6PF04 617 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 CRTC1Q6UUV9 634 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 SNX29P2Q8IUI4 249 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 OR51G2Q8NGK0 314 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 MGME1Q9BQP7 344 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 WDR83Q9BRX9 315 aaKnown RBP16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 LINC00597Q9H2U6 94 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 TREX1Q9NSU2 369 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 GPRC5BQ9NZH0 403 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 PCDHB11Q9Y5F2 797 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 TIAM2Q8IVF5 1701 aa16.49■□□□□ 0.23
SLC1A4-201ENST00000234256 ANXA2P2A6NMY6 339 aa16.48■□□□□ 0.23
SLC1A4-201ENST00000234256 B4DGG1 531 aa16.48■□□□□ 0.23
SLC1A4-201ENST00000234256 MID1O15344 667 aa16.48■□□□□ 0.23
SLC1A4-201ENST00000234256 ANXA2P07355 339 aaKnown RBP16.48■□□□□ 0.23
SLC1A4-201ENST00000234256 FGF4P08620 206 aa16.48■□□□□ 0.23
SLC1A4-201ENST00000234256 IGFBP6P24592 240 aaPredicted RBP16.48■□□□□ 0.23
SLC1A4-201ENST00000234256 HSD17B2P37059 387 aa16.48■□□□□ 0.23
SLC1A4-201ENST00000234256 DCTP40126 519 aa16.48■□□□□ 0.23
SLC1A4-201ENST00000234256 SPINT3P49223 89 aa16.48■□□□□ 0.23
SLC1A4-201ENST00000234256 TMBIM6P55061 237 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms