RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 FAM136AQ96C01 138 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 SEC16BQ96JE7 1060 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 NAPGQ99747 312 aaPredicted RBP16.23■□□□□ 0.19
RETREG3-210ENST00000590541 PLSCR2Q9NRY7 297 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 LANCL2Q9NS86 450 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 ABCF3Q9NUQ8 709 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 ZNF358Q9NW07 568 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 DNAJB12Q9NXW2 375 aaKnown RBP16.23■□□□□ 0.19
RETREG3-210ENST00000590541 GALPQ9UBC7 116 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 ST6GALNAC2Q9UJ37 374 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 H7BY64 318 aa16.22■□□□□ 0.19
RETREG3-210ENST00000590541 GFYI3L273 518 aa16.22■□□□□ 0.19
RETREG3-210ENST00000590541 CDC40O60508 579 aaKnown RBP eCLIP16.22■□□□□ 0.19
RETREG3-210ENST00000590541 RDH16O75452 317 aa16.22■□□□□ 0.19
RETREG3-210ENST00000590541 CDC123O75794 336 aaPredicted RBP16.22■□□□□ 0.19
RETREG3-210ENST00000590541 TRHRP34981 398 aaPredicted RBP16.22■□□□□ 0.19
RETREG3-210ENST00000590541 NR0B1P51843 470 aaKnown RBP16.22■□□□□ 0.19
RETREG3-210ENST00000590541 NUP107P57740 925 aa16.22■□□□□ 0.19
RETREG3-210ENST00000590541 ZNF549Q6P9A3 640 aa16.22■□□□□ 0.19
RETREG3-210ENST00000590541 CREG2Q8IUH2 290 aa16.22■□□□□ 0.19
RETREG3-210ENST00000590541 SULF2Q8IWU5 870 aa16.22■□□□□ 0.19
RETREG3-210ENST00000590541 LRRC56Q8IYG6 542 aaPredicted RBP16.22■□□□□ 0.19
RETREG3-210ENST00000590541 C2CD4AQ8NCU7 369 aaPredicted RBP16.22■□□□□ 0.19
RETREG3-210ENST00000590541 C16orf52Q8NHV5 167 aa16.22■□□□□ 0.19
RETREG3-210ENST00000590541 CCDC138Q96M89 665 aa16.22■□□□□ 0.19
RETREG3-210ENST00000590541 PRAP1Q96NZ9 151 aa16.22■□□□□ 0.19
RETREG3-210ENST00000590541 GPR21Q99679 349 aa16.22■□□□□ 0.19
RETREG3-210ENST00000590541 AARSD1Q9BTE6 412 aaKnown RBP16.22■□□□□ 0.19
RETREG3-210ENST00000590541 RBCK1Q9BYM8 510 aa16.22■□□□□ 0.19
RETREG3-210ENST00000590541 SLC24A3Q9HC58 644 aa16.22■□□□□ 0.19
RETREG3-210ENST00000590541 MED16Q9Y2X0 877 aa16.22■□□□□ 0.19
RETREG3-210ENST00000590541 MAGEB17A8MXT2 336 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 CTAG2O75638 210 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 HAUS5O94927 633 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 FOSL1P15407 271 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 IVDP26440 423 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 RGS4P49798 205 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 OR4D2P58180 307 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 MLF1P58340 268 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 DR1Q01658 176 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 DHX9Q08211 1270 aaKnown RBP16.21■□□□□ 0.19
RETREG3-210ENST00000590541 PMPCAQ10713 525 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 CNTN4Q8IWV2 1026 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 CLYBLQ8N0X4 340 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 CD200R1Q8TD46 325 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 TMEM125Q96AQ2 219 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 PEX11GQ96HA9 241 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 IARS2Q9NSE4 1012 aaKnown RBP16.21■□□□□ 0.19
RETREG3-210ENST00000590541 TAS2R13Q9NYV9 303 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 CORO1CQ9ULV4 474 aaPredicted RBP16.21■□□□□ 0.19
RETREG3-210ENST00000590541 KLF13Q9Y2Y9 288 aaPredicted RBP16.21■□□□□ 0.19
RETREG3-210ENST00000590541 L3MBTL1Q9Y468 752 aa16.21■□□□□ 0.19
RETREG3-210ENST00000590541 SCN3AQ9NY46 2000 aa16.21■□□□□ 0.18
RETREG3-210ENST00000590541 MAP1AP78559 2803 aaPredicted RBP16.2■□□□□ 0.18
RETREG3-210ENST00000590541 KCNE1BA0A087WTH5 132 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 USP27XA6NNY8 438 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 PRMT3O60678 531 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 HRH2P25021 359 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 HLCSP50747 726 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 ARHGAP11AQ6P4F7 1023 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 CYHR1Q6ZMK1 362 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 PALM2Q8IXS6 379 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 KCT2Q8NC54 265 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 OR52N2Q8NGI0 321 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 GIMAP7Q8NHV1 300 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 ZCCHC10Q8TBK6 192 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 TM4SF19Q96DZ7 209 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 CAPZA3Q96KX2 299 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 OR1F2PQ96R84 312 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 SLC30A3Q99726 388 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 ANKHQ9HCJ1 492 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 TMEM184CQ9NVA4 438 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 TRMT6Q9UJA5 497 aaKnown RBP16.2■□□□□ 0.18
RETREG3-210ENST00000590541 ABCA4P78363 2273 aa16.2■□□□□ 0.18
RETREG3-210ENST00000590541 VPS13CQ709C8 3753 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 KLRC4-KLRK1H3BQV0 150 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 PEX1O43933 1283 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 PDE9AO76083 593 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 C8GP07360 202 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 DLX5P56178 289 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 ARL4CP56559 192 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 RPS15AP62244 130 aaKnown RBP16.19■□□□□ 0.18
RETREG3-210ENST00000590541 ADAM8P78325 824 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 MPP1Q00013 466 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 SP140Q13342 867 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 CUL1Q13616 776 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 FRG1Q14331 258 aaKnown RBP16.19■□□□□ 0.18
RETREG3-210ENST00000590541 BBS9Q3SYG4 887 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 KLHL7Q8IXQ5 586 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 ZFP62Q8NB50 900 aaPredicted RBP16.19■□□□□ 0.18
RETREG3-210ENST00000590541 OR5T3Q8NGG3 340 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 CERS2Q96G23 380 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 POLDIP3Q9BY77 421 aaKnown RBP16.19■□□□□ 0.18
RETREG3-210ENST00000590541 NAALAD2Q9Y3Q0 740 aa16.19■□□□□ 0.18
RETREG3-210ENST00000590541 PHF3Q92576 2039 aaKnown RBP16.19■□□□□ 0.18
RETREG3-210ENST00000590541 ZNF860A6NHJ4 632 aa16.18■□□□□ 0.18
RETREG3-210ENST00000590541 SLC16A5O15375 505 aa16.18■□□□□ 0.18
RETREG3-210ENST00000590541 PROM1O43490 865 aa16.18■□□□□ 0.18
RETREG3-210ENST00000590541 SYF2O95926 243 aaKnown RBP16.18■□□□□ 0.18
RETREG3-210ENST00000590541 IL10P22301 178 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms