RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 PTGFRNQ9P2B2 879 aa12.4□□□□□ -0.42
HNRNPC-205ENST00000553300 DMGDHQ9UI17 866 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-205ENST00000553300 USP9XQ93008 2570 aaPredicted RBP12.4□□□□□ -0.42
HNRNPC-205ENST00000553300 DOPEY2Q9Y3R5 2298 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 LRIT2A6NDA9 550 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 ZNF860A6NHJ4 632 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 TCP11X1B4DZS4 312 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 PSMD12O00232 456 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 SEC24DO94855 1032 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 C2P06681 752 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 RNH1P13489 461 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 CASP2P42575 452 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 EFNA3P52797 238 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 RAB8AP61006 207 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 ARG2P78540 354 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 RHAGQ02094 409 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 ACTN3Q08043 901 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 TGM3Q08188 693 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 ACAP2Q15057 778 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 C18orf21Q32NC0 220 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 XKR6Q5GH73 641 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 MROH9Q5TGP6 573 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 ABHD17BQ5VST6 288 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 KLC3Q6P597 504 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 QSOX2Q6ZRP7 698 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 LANCL3Q6ZV70 420 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 CEP112Q8N8E3 955 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 SNX31Q8N9S9 440 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 NOA1Q8NC60 698 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 ARMC2Q8NEN0 867 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 OR5T3Q8NGG3 340 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 M1APQ8TC57 530 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 IFT81Q8WYA0 676 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 UBE2E3Q969T4 207 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 FMO2Q99518 471 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 BARD1Q99728 777 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 KLHL31Q9H511 634 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 IGSF5Q9NSI5 407 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 ASF1BQ9NVP2 202 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 NINJ2Q9NZG7 142 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 IKBKGQ9Y6K9 419 aa12.39□□□□□ -0.43
HNRNPC-205ENST00000553300 TRAV17A0A0B4J275 112 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 SYNDIG1LA6NDD5 238 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 CDK2AP1O14519 115 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 CCNT2O60583 730 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 PRMT3O60678 531 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 KLHL2O95198 593 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 ITGAMP11215 1152 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 GNLYP22749 145 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 TYK2P29597 1187 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 SERPINB1P30740 379 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 HNF4AP41235 474 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 KCNC1P48547 511 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 TNFSF10P50591 281 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 IRF8Q02556 426 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 PCDH1Q08174 1060 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 DOC2AQ14183 400 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 E2F2Q14209 437 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 RCN2Q14257 317 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 UAP1Q16222 522 aaPredicted RBP12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 BTBD16Q32M84 506 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 ADPRMQ3LIE5 342 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 PRR30Q53SZ7 412 aaPredicted RBP12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 TOR1AIP1Q5JTV8 583 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 FHL5Q5TD97 284 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 H3F3CQ6NXT2 135 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 TRIM40Q6P9F5 258 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 TAOK1Q7L7X3 1001 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 SIRT6Q8N6T7 355 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 SRFBP1Q8NEF9 429 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 ADAMTS18Q8TE60 1221 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 UBTD2Q8WUN7 234 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 CCT6BQ92526 530 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 NXNL1Q96CM4 212 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 MS4A6EQ96DS6 147 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 TRIM44Q96DX7 344 aaPredicted RBP12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 CNDP1Q96KN2 507 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 ZNF354BQ96LW1 612 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 ATOH8Q96SQ7 321 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 REXO4Q9GZR2 422 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 RHBGQ9H310 441 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 MMP25Q9NPA2 562 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 SNX15Q9NRS6 342 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 STMN3Q9NZ72 180 aa12.38□□□□□ -0.43
HNRNPC-205ENST00000553300 A0A096LPK6 155 aa12.37□□□□□ -0.43
HNRNPC-205ENST00000553300 SUPT3HB4E1H0 165 aa12.37□□□□□ -0.43
HNRNPC-205ENST00000553300 K7EPI3 171 aa12.37□□□□□ -0.43
HNRNPC-205ENST00000553300 ERI3O43414 337 aaKnown RBP12.37□□□□□ -0.43
HNRNPC-205ENST00000553300 SUPT3HO75486 399 aa12.37□□□□□ -0.43
HNRNPC-205ENST00000553300 CDC123O75794 336 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-205ENST00000553300 KRT38O76015 456 aa12.37□□□□□ -0.43
HNRNPC-205ENST00000553300 CBX6O95503 412 aa12.37□□□□□ -0.43
HNRNPC-205ENST00000553300 INHBAP08476 426 aa12.37□□□□□ -0.43
HNRNPC-205ENST00000553300 CNTFP26441 200 aa12.37□□□□□ -0.43
HNRNPC-205ENST00000553300 SERPINB8P50452 374 aa12.37□□□□□ -0.43
HNRNPC-205ENST00000553300 SERPINB9P50453 376 aa12.37□□□□□ -0.43
HNRNPC-205ENST00000553300 OR4D2P58180 307 aa12.37□□□□□ -0.43
HNRNPC-205ENST00000553300 DLG1Q12959 904 aa12.37□□□□□ -0.43
HNRNPC-205ENST00000553300 CHIT1Q13231 466 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms