RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 FAM53BQ14153 422 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 TMEM35AQ53FP2 167 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 SPDYAQ5MJ70 313 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 DEPDC1Q5TB30 811 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 ATG14Q6ZNE5 492 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 CACNA2D3Q8IZS8 1091 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 DSELQ8IZU8 1212 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 IL22RA1Q8N6P7 574 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 SRFBP1Q8NEF9 429 aaKnown RBP14.21□□□□□ -0.13
NUP54-213ENST00000513352 OR2L5Q8NG80 312 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 TWIST2Q8WVJ9 160 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.21□□□□□ -0.13
NUP54-213ENST00000513352 CKAP2Q8WWK9 683 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 RGMAQ96B86 450 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 GBP5Q96PP8 586 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 SORT1Q99523 831 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 C20orf27Q9GZN8 174 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 AICDAQ9GZX7 198 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 BRF2Q9HAW0 419 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 ZNF304Q9HCX3 659 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 NMRK1Q9NWW6 199 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 HCN3Q9P1Z3 774 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 IFT80Q9P2H3 777 aaPredicted RBP14.21□□□□□ -0.13
NUP54-213ENST00000513352 MARCOQ9UEW3 520 aaPredicted RBP14.21□□□□□ -0.13
NUP54-213ENST00000513352 PADI1Q9ULC6 663 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 NAALAD2Q9Y3Q0 740 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 PTGDR2Q9Y5Y4 395 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 SLC22A7Q9Y694 548 aa14.21□□□□□ -0.13
NUP54-213ENST00000513352 C4orf51C9J302 202 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 RTCAO00442 366 aaKnown RBP14.2□□□□□ -0.14
NUP54-213ENST00000513352 KLF11O14901 512 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 FOXS1O43638 330 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 RDH16O75452 317 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 ETHE1O95571 254 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 LINC00032P0C843 101 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 PIM1P11309 404 aaPredicted RBP14.2□□□□□ -0.14
NUP54-213ENST00000513352 HSD3B1P14060 373 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 HSD3B2P26439 372 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 RORAP35398 523 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 GCGRP47871 477 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 RPL14P50914 215 aaKnown RBP14.2□□□□□ -0.14
NUP54-213ENST00000513352 HMGCS1Q01581 520 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 PDCD2Q16342 344 aaPredicted RBP14.2□□□□□ -0.14
NUP54-213ENST00000513352 AP5B1Q2VPB7 878 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 NKAIN1Q4KMZ8 207 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 MLIPQ5VWP3 458 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 PRMT9Q6P2P2 845 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 FAM199XQ6PEV8 388 aaPredicted RBP14.2□□□□□ -0.14
NUP54-213ENST00000513352 TIPARPQ7Z3E1 657 aaKnown RBP14.2□□□□□ -0.14
NUP54-213ENST00000513352 KIRREL3Q8IZU9 778 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 ARHGEF39Q8N4T4 335 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 GBP7Q8N8V2 638 aaPredicted RBP14.2□□□□□ -0.14
NUP54-213ENST00000513352 GATA6Q92908 595 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 MVB12AQ96EY5 273 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 PPP1R36Q96LQ0 422 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 MAGEB18Q96M61 343 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 LRFN5Q96NI6 719 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 KCNC2Q96PR1 638 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 SORBS1Q9BX66 1292 aaKnown RBP14.2□□□□□ -0.14
NUP54-213ENST00000513352 ACPTQ9BZG2 426 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 CHST8Q9H2A9 424 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 LHX9Q9NQ69 397 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 ENAMQ9NRM1 1142 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 PNPOQ9NVS9 261 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.2□□□□□ -0.14
NUP54-213ENST00000513352 AKAP13Q12802 2813 aa14.2□□□□□ -0.14
NUP54-213ENST00000513352 SLC28A1O00337 649 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 PLPP1O14494 284 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 PIP5K1BO14986 540 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 B3GALT2O43825 422 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 GALR3O60755 368 aaPredicted RBP14.19□□□□□ -0.14
NUP54-213ENST00000513352 SNNO75324 88 aaPredicted RBP14.19□□□□□ -0.14
NUP54-213ENST00000513352 NSA2O95478 260 aaKnown RBP14.19□□□□□ -0.14
NUP54-213ENST00000513352 TBX6O95947 436 aaPredicted RBP14.19□□□□□ -0.14
NUP54-213ENST00000513352 FGF4P08620 206 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 LIPCP11150 499 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 CERS1P27544 350 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 OLR1P78380 273 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 MAT1AQ00266 395 aaKnown RBP14.19□□□□□ -0.14
NUP54-213ENST00000513352 OCRLQ01968 901 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 GUCY1A3Q02108 690 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 ZNF33BQ06732 778 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 CUL3Q13618 768 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 MAP7Q14244 749 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 NR6A1Q15406 480 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 TGIF1Q15583 401 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 ADPRMQ3LIE5 342 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 LCN10Q6JVE6 187 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 NIPAL1Q6NVV3 410 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 ABHD17CQ6PCB6 329 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 FAM47EQ6ZV65 393 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 PDSS2Q86YH6 399 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 CRLF3Q8IUI8 442 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 CT55Q8WUE5 264 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 FGF11Q92914 225 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 DPH2Q9BQC3 489 aaPredicted RBP14.19□□□□□ -0.14
NUP54-213ENST00000513352 TBCDQ9BTW9 1192 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 MRPL1Q9BYD6 325 aaKnown RBP14.19□□□□□ -0.14
NUP54-213ENST00000513352 ROGDIQ9GZN7 287 aa14.19□□□□□ -0.14
NUP54-213ENST00000513352 AKIRIN1Q9H9L7 192 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms