RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 ERVK-19Q9WJR5 959 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 KCNK6Q9Y257 313 aa4.77□□□□□ -1.65
SSR3-208ENST00000496050 RNF123Q5XPI4 1314 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 A0A087WZ39 114 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 SLC9B1P1A6NJY1 282 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 ERVV-2B6SEH9 535 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 TCP10L2B9ZVM9 353 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 SYT7O43581 403 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 HSF2BPO75031 334 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 BCAS2O75934 225 aaPredicted RBP4.76□□□□□ -1.65
SSR3-208ENST00000496050 MMP10P09238 476 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 PATE4P0C8F1 98 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 GNB3P16520 340 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 HLA-FP30511 346 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 STIP1P31948 543 aaKnown RBP4.76□□□□□ -1.65
SSR3-208ENST00000496050 HUNKP57058 714 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 SNRPD1P62314 119 aaKnown RBP4.76□□□□□ -1.65
SSR3-208ENST00000496050 CSNK2BP67870 215 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 CEACAM7Q14002 265 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 HNRNPDQ14103 355 aaKnown RBP4.76□□□□□ -1.65
SSR3-208ENST00000496050 TAB1Q15750 504 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 SGSM1Q2NKQ1 1148 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 ATP1A1-AS1Q5TC04 95 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 MEX3BQ6ZN04 569 aaKnown RBP4.76□□□□□ -1.65
SSR3-208ENST00000496050 C17orf107Q6ZR85 190 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 MIER3Q7Z3K6 550 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 CUZD1Q86UP6 607 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 ZC3H3Q8IXZ2 948 aaKnown RBP4.76□□□□□ -1.65
SSR3-208ENST00000496050 FBXW8Q8N3Y1 598 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 TEX26Q8N6G2 289 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 NEK11Q8NG66 645 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 RNASE8Q8TDE3 154 aaKnown RBP4.76□□□□□ -1.65
SSR3-208ENST00000496050 HAS2Q92819 552 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 AZIN2Q96A70 460 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 GMPPAQ96IJ6 420 aaPredicted RBP4.76□□□□□ -1.65
SSR3-208ENST00000496050 DUX3Q96PT4 197 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 PRAM1Q96QH2 718 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 RUFY1Q96T51 708 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 SPXQ9BT56 116 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 FSD1Q9BTV5 496 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 WWTR1Q9GZV5 400 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 MARCH7Q9H992 704 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 PRMT8Q9NR22 394 aaPredicted RBP4.76□□□□□ -1.65
SSR3-208ENST00000496050 RNF186Q9NXI6 227 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 DBF4Q9UBU7 674 aaPredicted RBP4.76□□□□□ -1.65
SSR3-208ENST00000496050 TSPAN16Q9UKR8 245 aa4.76□□□□□ -1.65
SSR3-208ENST00000496050 TRBV2A0A0J9YWF9 115 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 GTPBP10A4D1E9 387 aaKnown RBP4.75□□□□□ -1.65
SSR3-208ENST00000496050 PSMD3O43242 534 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 AMBPP02760 352 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 SKILP12757 684 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 ZNF18P17022 549 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 TYMPP19971 482 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 CYP3A5P20815 502 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 XGP55808 180 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 YBEYP58557 167 aaPredicted RBP4.75□□□□□ -1.65
SSR3-208ENST00000496050 IRX4P78413 519 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 GABPAQ06546 454 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 TRA2AQ13595 282 aaKnown RBP eCLIP4.75□□□□□ -1.65
SSR3-208ENST00000496050 FAM106AQ4KMX7 169 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 ZNF776Q68DI1 518 aaPredicted RBP4.75□□□□□ -1.65
SSR3-208ENST00000496050 SNRNP48Q6IEG0 339 aaKnown RBP4.75□□□□□ -1.65
SSR3-208ENST00000496050 CNSTQ6PJW8 725 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 B3GLCTQ6Y288 498 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 ELMOD1Q8N336 334 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 DCLK2Q8N568 766 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 SIDT2Q8NBJ9 832 aaKnown RBP4.75□□□□□ -1.65
SSR3-208ENST00000496050 FAM76AQ8TAV0 307 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 SPATA18Q8TC71 538 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 SMAP2Q8WU79 429 aaPredicted RBP4.75□□□□□ -1.65
SSR3-208ENST00000496050 CHURC1Q8WUH1 139 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 ZNF501Q96CX3 271 aaPredicted RBP4.75□□□□□ -1.65
SSR3-208ENST00000496050 BPIFA2Q96DR5 249 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 LURAP1Q96LR2 239 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 PCDHB18PQ96TA0 734 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 CCM2Q9BSQ5 444 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 TEX13AQ9BXU3 409 aaPredicted RBP4.75□□□□□ -1.65
SSR3-208ENST00000496050 TMEM245Q9H330 911 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 FETUBQ9UGM5 382 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 TEKT2Q9UIF3 430 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 ODF2LQ9ULJ1 636 aa4.75□□□□□ -1.65
SSR3-208ENST00000496050 STRAPQ9Y3F4 350 aaKnown RBP4.75□□□□□ -1.65
SSR3-208ENST00000496050 hCG_38984A0A1B0GV85 526 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 SLC15A5A6NIM6 579 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 ZNF195O14628 629 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 MLNRO43193 412 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 GMNNO75496 209 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 EPOP01588 193 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 SP1P08047 785 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 TSFMP43897 325 aaKnown RBP4.74□□□□□ -1.65
SSR3-208ENST00000496050 GNB1P62873 340 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 GALK2Q01415 458 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 WASHC5Q12768 1159 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 CNTN1Q12860 1018 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 GIT2Q14161 759 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 WLSQ5T9L3 541 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 PLPP4Q5VZY2 271 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 FIP1L1Q6UN15 594 aaKnown RBP4.74□□□□□ -1.65
SSR3-208ENST00000496050 CYP4V2Q6ZWL3 525 aaPredicted RBP4.74□□□□□ -1.65
SSR3-208ENST00000496050 OR13C5Q8NGS8 318 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms