RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ZNF544Q6NX49 715 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 ZNF367Q7RTV3 350 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 LMNTD1Q8N9Z9 388 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 C11orf65Q8NCR3 313 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 SOCS4Q8WXH5 440 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 ASB15Q8WXK1 588 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 MED8Q96G25 268 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 OPALINQ96PE5 141 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 IL4I1Q96RQ9 567 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 MMP28Q9H239 520 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 CLEC2DQ9UHP7 191 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 PRAMEF33A0A0G2JMD5 474 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 CAPN5O15484 640 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 PRAMEF10O60809 474 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 ANXA4P09525 319 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 HBA1P69905 142 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 SMAD3P84022 425 aaKnown RBP11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 ZNF79Q15937 498 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 FAM180BQ6P0A1 224 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 BCDIN3DQ7Z5W3 292 aaKnown RBP11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 DENND6BQ8NEG7 585 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 CIDECQ96AQ7 238 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 C11orf24Q96F05 449 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 DOCK6Q96HP0 2047 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 OR2B2Q9GZK3 357 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 HHATLQ9HCP6 504 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 C11orf16Q9NQ32 467 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 SPATA6Q9NWH7 488 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 TAS2R9Q9NYW1 312 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 V9GYH0 126 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 CCRL2O00421 344 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 C8GP07360 202 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 ANXA8P13928 327 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 CNR2P34972 360 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 CTSOP43234 321 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 MRPS15P82914 257 aaKnown RBP11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 MC1RQ01726 317 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 IFI44LQ53G44 452 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 SLX4IPQ5VYV7 408 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 C19orf48Q6RUI8 117 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 KLHL17Q6TDP4 642 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 ZNF517Q6ZMY9 492 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 C17orf50Q8WW18 174 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 PIK3R3Q92569 461 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 ASIC4Q96FT7 647 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 CASD1Q96PB1 797 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 TAPBPLQ9BX59 468 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 ASPNQ9BXN1 380 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 BEX2Q9BXY8 128 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 TIGARQ9NQ88 270 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 CCDC177Q9NQR7 707 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 TRPM5Q9NZQ8 1165 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 RUVBL1Q9Y265 456 aaKnown RBP11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 CFL2Q9Y281 166 aa11.26□□□□□ -0.61
PDZRN3-203ENST00000462146 PNMA8CA0A1B0GUJ8 204 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 SNX4O95219 450 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 GASTP01350 101 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 SCARB2Q14108 478 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 CCSAPQ6IQ19 270 aaPredicted RBP11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 OTOP2Q7RTS6 562 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 THOC6Q86W42 341 aaKnown RBP11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 DEPDC4Q8N2C3 294 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 LILRA3Q8N6C8 439 aaPredicted RBP11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 C2orf69Q8N8R5 385 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 DCAF4L2Q8NA75 395 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 AQP11Q8NBQ7 271 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 ADAMTS19Q8TE59 1207 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 OR4K3Q96R72 315 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 SGK2Q9HBY8 427 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 ACER3Q9NUN7 267 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 GNG14A0A1W2PPG7 69 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 SAP18O00422 153 aaKnown RBP11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 SEPT4O43236 478 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 PRMT3O60678 531 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 SLITRK5O94991 958 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 C6orf47O95873 294 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 OR56A5P0C7T3 313 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 CHMP24386 653 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 HNMTP50135 292 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 OLR1P78380 273 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 MXD1Q05195 221 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 STARD3Q14849 445 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 EIF4HQ15056 248 aaKnown RBP11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 TBRG1Q3YBR2 411 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 ZFP69Q49AA0 526 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 MFSD14CQ5VZR4 134 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 PAQR6Q6TCH4 344 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 PTCHD4Q6ZW05 846 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 COQ8BQ96D53 544 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 CRELD1Q96HD1 420 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 SNTG1Q9NSN8 517 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 BTNL2Q9UIR0 455 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 MAP4K5Q9Y4K4 846 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 SMIM30A4D0T7 59 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 FAM172BPA6NC97 362 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 OR2AG2A6NM03 316 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 GFYI3L273 518 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 ENTPD6O75354 484 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 TNFRSF21O75509 655 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms