RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 KCNQ1P51787 676 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 PTGR1Q14914 329 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 SSX6Q7RTT6 188 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 PIWIL3Q7Z3Z3 882 aaKnown RBP11.65□□□□□ -0.54
UBR4-205ENST00000417040 C7orf43Q8WVR3 580 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 DDX1Q92499 740 aaKnown RBP11.65□□□□□ -0.54
UBR4-205ENST00000417040 RGMAQ96B86 450 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 ADAMTS10Q9H324 1103 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 TMEM131LA2VDJ0 1609 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 PROM1O43490 865 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 RFPL2O75678 378 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 HMGN1P05114 100 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 PORP16435 677 aaPredicted RBP11.65□□□□□ -0.54
UBR4-205ENST00000417040 GJA1P17302 382 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 CAP1Q01518 475 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 AUTS2Q8WXX7 1259 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 MSLNLQ96KJ4 702 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 DERL2Q9GZP9 239 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 OR10A4Q9H209 315 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 TMEM88BA6NKF7 163 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 LRRN3E7EW58 273 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 M0R2N6 131 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 PRNPP04156 253 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 CELP19835 753 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 CD47Q08722 323 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 CHRDL2Q6WN34 429 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 ZNF367Q7RTV3 350 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 GALNT7Q86SF2 657 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 NPAS3Q8IXF0 933 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 CPA6Q8N4T0 437 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 NEIL3Q8TAT5 605 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 SLC6A7Q99884 636 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 CD244Q9BZW8 370 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 LRRN3Q9H3W5 708 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 WDR6Q9NNW5 1121 aaKnown RBP11.65□□□□□ -0.54
UBR4-205ENST00000417040 FUOMA2VDF0 154 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 FAM189A1O60320 539 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 GTF2F2P13984 249 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 ACVR1BP36896 505 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 PTCHD3Q3KNS1 767 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 PAMR1Q6UXH9 720 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 LRRC70Q7Z2Q7 622 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 NUDT13Q86X67 352 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 METTL21AQ8WXB1 218 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 SHISA4Q96DD7 197 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 HSPA12BQ96MM6 686 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 HCN3Q9P1Z3 774 aa11.65□□□□□ -0.54
UBR4-205ENST00000417040 FAM72CH0Y354 149 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 SFTPBP07988 381 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 PNLIPRP1P54315 467 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 ZXDBP98169 803 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 CARD16Q5EG05 197 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 FAM72AQ5TYM5 149 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 TXNDC8Q6A555 127 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 FAM72DQ6L9T8 149 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 WASH2PQ6VEQ5 465 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 SLC24A5Q71RS6 500 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 AMZ2Q86W34 360 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 FAM72BQ86X60 149 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 FBXO22Q8NEZ5 403 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 SLC16A10Q8TF71 515 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 NELL2Q99435 816 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 P2RY13Q9BPV8 354 aa11.65□□□□□ -0.55
UBR4-205ENST00000417040 TNFRSF10BO14763 440 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 SLC19A2O60779 497 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 LDOC1O95751 146 aaPredicted RBP11.64□□□□□ -0.55
UBR4-205ENST00000417040 HCKP08631 526 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 MAP2K3P46734 347 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 PREPP48147 710 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 OR4D2P58180 307 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 EMX2Q04743 252 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 ENPP2Q13822 863 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 GINS1Q14691 196 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 RHEBQ15382 184 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 PLEKHG7Q6ZR37 379 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 RBM12BQ8IXT5 1001 aaKnown RBP11.64□□□□□ -0.55
UBR4-205ENST00000417040 ZDHHC1Q8WTX9 485 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 TRIB2Q92519 343 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 BIRC8Q96P09 236 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 CCM2LQ9NUG4 571 aaPredicted RBP11.64□□□□□ -0.55
UBR4-205ENST00000417040 COPS7AQ9UBW8 275 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 OR6C74A6NCV1 312 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 NRP1O14786 923 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 IFNA21P01568 189 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 ITGA5P08648 1049 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 TNFRSF1BP20333 461 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 GSTM3P21266 225 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 NR0B1P51843 470 aaKnown RBP11.64□□□□□ -0.55
UBR4-205ENST00000417040 SEC23BQ15437 767 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 VMACQ2NL98 169 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 TMEM44Q2T9K0 475 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 SFRP4Q6FHJ7 346 aaPredicted RBP11.64□□□□□ -0.55
UBR4-205ENST00000417040 C1orf94Q6P1W5 598 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 DEDD2Q8WXF8 326 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 CCDC86Q9H6F5 360 aaKnown RBP11.64□□□□□ -0.55
UBR4-205ENST00000417040 ZNF696Q9H7X3 374 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 TEX13DA0A0J9YY54 714 aaPredicted RBP11.64□□□□□ -0.55
UBR4-205ENST00000417040 DISC1C4P0D8 188 aa11.64□□□□□ -0.55
UBR4-205ENST00000417040 SRPRAP08240 638 aaKnown RBP11.64□□□□□ -0.55
UBR4-205ENST00000417040 HTR1AP08908 422 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms