RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 PER3P56645 1201 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 OR4D2P58180 307 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 SLC26A5P58743 744 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 STXBP1P61764 594 aaKnown RBP16.67■□□□□ 0.26
HDDC3-201ENST00000330334 ZKSCAN8Q15776 578 aaPredicted RBP16.67■□□□□ 0.26
HDDC3-201ENST00000330334 SULT1C3Q6IMI6 304 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 ZNF572Q7Z3I7 529 aaPredicted RBP16.67■□□□□ 0.26
HDDC3-201ENST00000330334 CTAGE6Q86UF2 777 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 GPSM1Q86YR5 675 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 KRT78Q8N1N4 520 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 SLC5A8Q8N695 610 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 AMER2Q8N7J2 671 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 ELP5Q8TE02 316 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 TSLPQ969D9 159 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 RAB17Q9H0T7 212 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 OSGIN2Q9Y236 505 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 CPAMD8Q8IZJ3 1885 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 IGKV3D-11A0A0A0MRZ8 115 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 LRIT2A6NDA9 550 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 LRRTM2O43300 516 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 B4GALT2O60909 372 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 F10P00742 488 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 CCDC166P0CW27 439 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 HPDP32754 393 aaPredicted RBP16.66■□□□□ 0.26
HDDC3-201ENST00000330334 TAS2R50P59544 299 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 GPX6P59796 221 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 RAB8AP61006 207 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 OLR1P78380 273 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 TUBA3CQ13748 450 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.66■□□□□ 0.26
HDDC3-201ENST00000330334 GRTP1Q5TC63 336 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 TUBA3EQ6PEY2 450 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 CAPN12Q6ZSI9 719 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 CRLF3Q8IUI8 442 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 BEST3Q8N1M1 668 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 RELTQ969Z4 430 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 GAL3ST3Q96A11 431 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 WDR34Q96EX3 536 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 PTCHD1Q96NR3 888 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 NPAS2Q99743 824 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 NPLQ9BXD5 320 aaPredicted RBP16.66■□□□□ 0.26
HDDC3-201ENST00000330334 RBCK1Q9BYM8 510 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 KLHL31Q9H511 634 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 CAB39LQ9H9S4 337 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 PRDM9Q9NQV7 894 aa16.66■□□□□ 0.26
HDDC3-201ENST00000330334 TCRBV16S1A1N1A0A5B0 115 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 PSMD12O00232 456 aaPredicted RBP16.65■□□□□ 0.26
HDDC3-201ENST00000330334 TAPBPO15533 448 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 CLEC3AO75596 197 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 CLDN1O95832 211 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 B3GALT4O96024 378 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 CD1DP15813 335 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 SPRP35270 261 aaPredicted RBP16.65■□□□□ 0.26
HDDC3-201ENST00000330334 CD96P40200 585 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 HNF4AP41235 474 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 PLTPP55058 493 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 RAB10P61026 200 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 ADPRMQ3LIE5 342 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 ZNF766Q5HY98 468 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 ZGRF1Q86YA3 2104 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 ARMC10Q8N2F6 343 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 HORMAD2Q8N7B1 307 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 PDPRQ8NCN5 879 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 MDS2Q8NDY4 140 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 KIAA1191Q96A73 305 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 UTP23Q9BRU9 249 aaKnown RBP16.65■□□□□ 0.26
HDDC3-201ENST00000330334 AICDAQ9GZX7 198 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 DNAJC11Q9NVH1 559 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 PTBP2Q9UKA9 531 aaKnown RBP16.65■□□□□ 0.26
HDDC3-201ENST00000330334 MMACHCQ9Y4U1 282 aa16.65■□□□□ 0.26
HDDC3-201ENST00000330334 ITPR2Q14571 2701 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 CELSR2Q9HCU4 2923 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 A1L4Q6 167 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 PHGDHO43175 533 aaKnown RBP16.64■□□□□ 0.25
HDDC3-201ENST00000330334 STK16O75716 305 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 BTG2P78543 158 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 C2orf54Q08AI8 447 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 NAB1Q13506 487 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 SLBPQ14493 270 aaKnown RBP eCLIP16.64■□□□□ 0.25
HDDC3-201ENST00000330334 C18orf21Q32NC0 220 aaPredicted RBP16.64■□□□□ 0.25
HDDC3-201ENST00000330334 TOR1AIP1Q5JTV8 583 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 FCRLBQ6BAA4 426 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.64■□□□□ 0.25
HDDC3-201ENST00000330334 CA13Q8N1Q1 262 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 SPATA6LQ8N4H0 392 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 ARMC2Q8NEN0 867 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 FBXO25Q8TCJ0 367 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 MS4A6EQ96DS6 147 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 SCMH1Q96GD3 660 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 FAR2Q96K12 515 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 TMEM79Q9BSE2 394 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 TRIM45Q9H8W5 580 aaPredicted RBP16.64■□□□□ 0.25
HDDC3-201ENST00000330334 CRYBG3Q68DQ2 2970 aa16.64■□□□□ 0.25
HDDC3-201ENST00000330334 DIDO1Q9BTC0 2240 aaKnown RBP16.64■□□□□ 0.25
HDDC3-201ENST00000330334 A0A088AWK7 358 aa16.63■□□□□ 0.25
HDDC3-201ENST00000330334 SYNDIG1LA6NDD5 238 aa16.63■□□□□ 0.25
HDDC3-201ENST00000330334 ANKDD1BA6NHY2 528 aa16.63■□□□□ 0.25
HDDC3-201ENST00000330334 NCF1BA6NI72 391 aaPredicted RBP16.63■□□□□ 0.25
HDDC3-201ENST00000330334 SAGE2PA6NJ88 616 aa16.63■□□□□ 0.25
HDDC3-201ENST00000330334 NCF1CA8MVU1 366 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms