RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 C8orf48Q96LL4 319 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 HHIPQ96QV1 700 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 PANX1Q96RD7 426 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 GTPBP2Q9BX10 602 aaKnown RBP17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 ABCG8Q9H221 673 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 NUP50Q9UKX7 468 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 HSPB11Q9Y547 144 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 TET1Q8NFU7 2136 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 SUV39H1O43463 412 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 PDYNP01213 254 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 CXCL10P02778 98 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 CYP17A1P05093 508 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 ANXA8P13928 327 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 GPC1P35052 558 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 CRYBB2P43320 205 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 KIR3DL1P43629 444 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 GDPGP1Q6ZNW5 385 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 ZNF621Q6ZSS3 439 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 SYNPOQ8N3V7 929 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 FBXL6Q8N531 539 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 ESX1Q8N693 406 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 OR4C15Q8NGM1 316 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 TRAF4Q9BUZ4 470 aaPredicted RBP17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 PDFQ9HBH1 243 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 MAPRE3Q9UPY8 281 aa17.01■□□□□ 0.31
CDKN1B-201ENST00000228872 OR5K3A6NET4 321 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 FABP12A6NFH5 140 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 TMEM229AB2RXF0 380 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 B4GALT3O60512 393 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 ACADMP11310 421 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 CSTF2P33240 577 aaKnown RBP eCLIP17■□□□□ 0.31
CDKN1B-201ENST00000228872 VEZF1Q14119 521 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17■□□□□ 0.31
CDKN1B-201ENST00000228872 TMC8Q8IU68 726 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 THEM5Q8N1Q8 247 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 LPCAT1Q8NF37 534 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 OR4M2Q8NGB6 313 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 SLC29A3Q9BZD2 475 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 NDUFAF4Q9P032 175 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 SEC14L4Q9UDX3 406 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 DOCK4Q8N1I0 1966 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 SMLR1H3BR10 107 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 SCAMP3O14828 347 aaKnown RBP17■□□□□ 0.31
CDKN1B-201ENST00000228872 PDE9AO76083 593 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 PRLP01236 227 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 TYMPP19971 482 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 RGRP47804 291 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 CPSF6Q16630 551 aaKnown RBP eCLIP17■□□□□ 0.31
CDKN1B-201ENST00000228872 TJAP1Q5JTD0 557 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 PLET1Q6UQ28 207 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 ZNF280BQ86YH2 543 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 LGI4Q8N135 537 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 OR52J3Q8NH60 311 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 MGME1Q9BQP7 344 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 FAM126AQ9BYI3 521 aaPredicted RBP17■□□□□ 0.31
CDKN1B-201ENST00000228872 EIF3KQ9UBQ5 218 aaKnown RBP17■□□□□ 0.31
CDKN1B-201ENST00000228872 SLC23A1Q9UHI7 598 aa17■□□□□ 0.31
CDKN1B-201ENST00000228872 SH3D21A4FU49 640 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 MAGEB17A8MXT2 336 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 ADAMDEC1O15204 470 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 SCO1O75880 301 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 CCNB2O95067 398 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 NUDT7P0C024 238 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 POU3F3P20264 500 aaPredicted RBP16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 AQP1P29972 269 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 OR1E1P30953 314 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 ABRQ12979 859 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 GLCCI1Q86VQ1 547 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 FAM9CQ8IZT9 166 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 SPPL2AQ8TCT8 520 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 DIRAS2Q96HU8 199 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 ING3Q9NXR8 418 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 PCDHB8Q9UN66 801 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 LSM2Q9Y333 95 aaKnown RBP16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 PCDHB7Q9Y5E2 793 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 ALDH9A1P49189 494 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 ATN1P54259 1190 aaPredicted RBP16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 RHAGQ02094 409 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 MXD1Q05195 221 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 MTAPQ13126 283 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 TCTN1Q2MV58 587 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 PYDC2Q56P42 97 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 FBXO46Q6PJ61 603 aaPredicted RBP16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 CRIPAKQ8N1N5 446 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 LRRC20Q8TCA0 184 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 CCDC120Q96HB5 630 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 RPRD1AQ96P16 312 aaPredicted RBP16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 DOHHQ9BU89 302 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 GLTPQ9NZD2 209 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 STUB1Q9UNE7 303 aa16.99■□□□□ 0.31
CDKN1B-201ENST00000228872 ARHGEF15O94989 841 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 TSPAN19P0C672 248 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 CKMT1AP12532 417 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 EPB42P16452 691 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 PSMA1P25786 263 aaKnown RBP16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 ITGB7P26010 798 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 MAP2K3P46734 347 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 MAPK12P53778 367 aa16.98■□□□□ 0.31
CDKN1B-201ENST00000228872 YBEYP58557 167 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms