RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 NSFP46459 744 aaKnown RBP4.61□□□□□ -1.67
LINC00397-202ENST00000606785 CLCN4P51793 760 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 DVL1P1P54792 670 aaPredicted RBP4.61□□□□□ -1.67
LINC00397-202ENST00000606785 SLC26A5P58743 744 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 HERV-K104P61576 105 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 IRX4P78413 519 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 KCNJ10P78508 379 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 CDH18Q13634 790 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 DPYSQ14117 519 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 KARSQ15046 597 aaKnown RBP4.61□□□□□ -1.67
LINC00397-202ENST00000606785 FASTKD1Q53R41 847 aaKnown RBP4.61□□□□□ -1.67
LINC00397-202ENST00000606785 UGT3A1Q6NUS8 523 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 C16orf87Q6PH81 154 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 OLFM4Q6UX06 510 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 OTUD6AQ7L8S5 288 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 COX8CQ7Z4L0 72 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 SPATA2LQ8IUW3 424 aaPredicted RBP4.61□□□□□ -1.67
LINC00397-202ENST00000606785 ZNF444Q8N0Y2 327 aaPredicted RBP4.61□□□□□ -1.67
LINC00397-202ENST00000606785 METTL27Q8N6F8 245 aaPredicted RBP4.61□□□□□ -1.67
LINC00397-202ENST00000606785 GBP7Q8N8V2 638 aaPredicted RBP4.61□□□□□ -1.67
LINC00397-202ENST00000606785 LEMD2Q8NC56 503 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 CHURC1Q8WUH1 139 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 VOPP1Q96AW1 172 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 SPAG8Q99932 426 aaPredicted RBP4.61□□□□□ -1.67
LINC00397-202ENST00000606785 PSD2Q9BQI7 771 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 NTMT1Q9BV86 223 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 DPH5Q9H2P9 285 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 DPEP2Q9H4A9 486 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 TFB2MQ9H5Q4 396 aaKnown RBP4.61□□□□□ -1.67
LINC00397-202ENST00000606785 EVA1AQ9H8M9 152 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 UPF2Q9HAU5 1272 aaKnown RBP4.61□□□□□ -1.67
LINC00397-202ENST00000606785 EXOC1Q9NV70 894 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 SOHLH2Q9NX45 425 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 PSORS1C1Q9UIG5 152 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 NCKAP1Q9Y2A7 1128 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 CFAP65Q6ZU64 1925 aaKnown RBP4.61□□□□□ -1.67
LINC00397-202ENST00000606785 TRIP12Q14669 1992 aaPredicted RBP4.61□□□□□ -1.67
LINC00397-202ENST00000606785 SMCHD1A6NHR9 2005 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 CHUKO15111 745 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 GMNNO75496 209 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 DFFBO76075 338 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 AKR7A3O95154 331 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 PPP1R3DO95685 299 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 ATP1B1P05026 303 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 CHRNGP07510 517 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 IGHV4-38-2P0DP08 117 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 DNAJB1P25685 340 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 RBMS1P29558 406 aaKnown RBP4.6□□□□□ -1.67
LINC00397-202ENST00000606785 ACAA2P42765 397 aaKnown RBP4.6□□□□□ -1.67
LINC00397-202ENST00000606785 TRPC1P48995 793 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 TNFSF10P50591 281 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 MRPS21P82921 87 aaKnown RBP4.6□□□□□ -1.67
LINC00397-202ENST00000606785 MYL7Q01449 175 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 GIT2Q14161 759 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 RBM39Q14498 530 aaKnown RBP4.6□□□□□ -1.67
LINC00397-202ENST00000606785 SQLEQ14534 574 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 STX1AQ16623 288 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 XKR6Q5GH73 641 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 HERC4Q5GLZ8 1057 aaPredicted RBP4.6□□□□□ -1.67
LINC00397-202ENST00000606785 SLC25A53Q5H9E4 307 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 RAET1GQ6H3X3 334 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 G2E3Q7L622 706 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 C16orf82Q7Z2V1 217 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 MTERF4Q7Z6M4 381 aaKnown RBP4.6□□□□□ -1.67
LINC00397-202ENST00000606785 SYVN1Q86TM6 617 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 ZNF383Q8NA42 475 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 RNF149Q8NC42 400 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 ZNF540Q8NDQ6 660 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 SLC24A4Q8NFF2 622 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 OR7A2PQ8NGA2 310 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 SEPT8Q92599 483 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 ESAMQ96AP7 390 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 IGSF21Q96ID5 467 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 ZNF479Q96JC4 524 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 ST6GAL2Q96JF0 529 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 FCRL4Q96PJ5 515 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 ASCL2Q99929 193 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 RAB17Q9H0T7 212 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 ATG10Q9H0Y0 220 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 TRPV6Q9H1D0 765 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 RWDD1Q9H446 243 aaPredicted RBP4.6□□□□□ -1.67
LINC00397-202ENST00000606785 PANK4Q9NVE7 773 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 UTP6Q9NYH9 597 aaKnown RBP4.6□□□□□ -1.67
LINC00397-202ENST00000606785 OR6C2Q9NZP2 312 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 FLRT3Q9NZU0 649 aa4.6□□□□□ -1.67
LINC00397-202ENST00000606785 CGNQ9P2M7 1197 aaKnown RBP4.6□□□□□ -1.67
LINC00397-202ENST00000606785 C19orf25Q9UFG5 118 aaPredicted RBP4.6□□□□□ -1.67
LINC00397-202ENST00000606785 FAF1Q9UNN5 650 aaPredicted RBP4.6□□□□□ -1.67
LINC00397-202ENST00000606785 CCDC162PA2VCL2 907 aa4.59□□□□□ -1.67
LINC00397-202ENST00000606785 ERICH4A6NGS2 130 aa4.59□□□□□ -1.67
LINC00397-202ENST00000606785 PRAC2D3DTV9 90 aa4.59□□□□□ -1.67
LINC00397-202ENST00000606785 FPGTO14772 594 aa4.59□□□□□ -1.67
LINC00397-202ENST00000606785 GLRA3O75311 464 aa4.59□□□□□ -1.67
LINC00397-202ENST00000606785 KRT33AO76009 404 aa4.59□□□□□ -1.67
LINC00397-202ENST00000606785 TPM3P06753 285 aa4.59□□□□□ -1.67
LINC00397-202ENST00000606785 SFTPBP07988 381 aa4.59□□□□□ -1.67
LINC00397-202ENST00000606785 NGFRP08138 427 aa4.59□□□□□ -1.67
LINC00397-202ENST00000606785 FRMD6-AS1P0C7T7 363 aa4.59□□□□□ -1.67
LINC00397-202ENST00000606785 SLC6A12P48065 614 aa4.59□□□□□ -1.67
LINC00397-202ENST00000606785 PITPNBP48739 271 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms