RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SLC2A14Q8TDB8 520 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 DUSP19Q8WTR2 217 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 SLC20A1Q8WUM9 679 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 SEMA4DQ92854 862 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 ARHGEF2Q92974 986 aaKnown RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 CD101Q93033 1021 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 ABTB1Q969K4 478 aaPredicted RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 FBXO32Q969P5 355 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 SLC35C1Q96A29 364 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 JAKMIP2Q96AA8 810 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 RHBDF1Q96CC6 855 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 ORAI1Q96D31 301 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 ARHGEF26Q96DR7 871 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 RRNAD1Q96FB5 475 aaKnown RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 MTERF1Q99551 399 aaKnown RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 PKP4Q99569 1192 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 TSG101Q99816 390 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 P2RY13Q9BPV8 354 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 DUSP16Q9BY84 665 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 EVA1AQ9H8M9 152 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 SEBOXQ9HB31 216 aaPredicted RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 CISHQ9NSE2 258 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 CLIC5Q9NZA1 410 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 HMGXB4Q9UGU5 601 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 ARMCX3Q9UH62 379 aaPredicted RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 MAN1B1Q9UKM7 699 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 ACSL5Q9ULC5 683 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 KIAA1257Q9ULG3 409 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 NDRG2Q9UN36 371 aaKnown RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 SCML2Q9UQR0 700 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 CPQQ9Y646 472 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 MAU2Q9Y6X3 613 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 R4GN57 208 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 ASCC3Q8N3C0 2202 aaKnown RBP3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 SPTBN2O15020 2390 aa3.49□□□□□ -1.85
CKS1BP3-201ENST00000600888 KNL1Q8NG31 2342 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 C1orf226A1L170 272 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 TRIM49BA6NDI0 452 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 K7EQS6 105 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 XPO1O14980 1071 aaKnown RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 SPINT2O43291 252 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 COCHO43405 550 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 BUB3O43684 328 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 LDB3O75112 727 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 JRKO75564 520 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 RNASEH2AO75792 299 aaKnown RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 FGFR1OPO95684 399 aaKnown RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 RETP07949 1114 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 F7P08709 466 aaPredicted RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 PAEPP09466 180 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 MBL2P11226 248 aaPredicted RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 VDRP11473 427 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 CCDC130P13994 396 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 MCM3P25205 808 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 CORO1AP31146 461 aaKnown RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 ATP5C1P36542 298 aaKnown RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 OPRD1P41143 372 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 FASLGP48023 281 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 RPL34P49207 117 aaKnown RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 FMO5P49326 533 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZNF132P52740 706 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 MAP3K7CLP57077 242 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 GCNT1Q02742 428 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 CETN1Q12798 172 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 CUL2Q13617 745 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 DECR1Q16698 335 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZNF718Q3SXZ3 478 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZNF672Q499Z4 452 aaPredicted RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 NCEH1Q6PIU2 408 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 BRAT1Q6PJG6 821 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 GFRALQ6UXV0 394 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 SCARA5Q6ZMJ2 495 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 Q6ZS52 159 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 RSRC2Q7L4I2 434 aaKnown RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 MAATS1Q7Z4T9 603 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 PXKQ7Z7A4 578 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 SCD5Q86SK9 330 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 NR2C2APQ86WQ0 139 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 TMEM219Q86XT9 240 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 ARHGAP12Q8IWW6 846 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 ODF3L1Q8IXM7 274 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 RNF113BQ8IZP6 322 aaKnown RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 C1orf87Q8N0U7 546 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 ARHGAP18Q8N392 663 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 RFLNBQ8N5W9 214 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 PPHLN1Q8NEY8 458 aaKnown RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 SGCDQ92629 289 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 FAM81BQ96LP2 452 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 MED10Q9BTT4 135 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 LINC00597Q9H2U6 94 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 LRRC4Q9HBW1 653 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 TRPC7Q9HCX4 862 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 SPHK2Q9NRA0 654 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 FAM49BQ9NUQ9 324 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 CHMP5Q9NZZ3 219 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 CHORDC1Q9UHD1 332 aaPredicted RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 KCNG2Q9UJ96 466 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 PADI1Q9ULC6 663 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZNF510Q9Y2H8 683 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms