RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 V9GYQ6 96 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 IFRD1O00458 451 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 DFNA5O60443 496 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 CCDC159P0C7I6 412 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 CD22P20273 847 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 TACR1P25103 407 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 P2RY2P41231 377 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 OR4D2P58180 307 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 PWP1Q13610 501 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 TSTA3Q13630 321 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 SMU1Q2TAY7 513 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 DESI1Q6ICB0 168 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 ZNF544Q6NX49 715 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 PAGE2Q7Z2X7 111 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 P2RY8Q86VZ1 359 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 NLRP8Q86W28 1048 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 PROSER1Q86XN7 944 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 RIMKLAQ8IXN7 391 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 YAF2Q8IY57 180 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 CPA6Q8N4T0 437 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 ZNF555Q8NEP9 628 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 CHFRQ96EP1 664 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 APOLD1Q96LR9 279 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 FOPNLQ96NB1 174 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 MTERF1Q99551 399 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 NTN4Q9HB63 628 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 PRSS16Q9NQE7 514 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 FAM118AQ9NWS6 357 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 VAPAQ9P0L0 249 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 PRKAB1Q9Y478 270 aa16.43■□□□□ 0.22
SHKBP1-205ENST00000594973 LRATO95237 230 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 KAT7O95251 611 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 TPD52P55327 224 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 EEFSECP57772 596 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 CNTN1Q12860 1018 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 STEAP3Q658P3 488 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 RASGRP3Q8IV61 690 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 LMNTD1Q8N9Z9 388 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 OR6F1Q8NGZ6 308 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 RORBQ92753 470 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 GTF2H4Q92759 462 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 ZNF566Q969W8 418 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 CLMPQ9H6B4 373 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 SLA2Q9H6Q3 261 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 ZFC3H1O60293 1989 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 UPK1AO00322 258 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 SH3BGRLO75368 114 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 JUPP14923 745 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 IMPA1P29218 277 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 IFNA8P32881 189 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 RPS14P62263 151 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 TMEM236Q5W0B7 351 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 TRMT11Q7Z4G4 463 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 CCDC103Q8IW40 242 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 CLEC4FQ8N1N0 589 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 PLA2G15Q8NCC3 412 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 GLB1L3Q8NCI6 653 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 IL17RDQ8NFM7 739 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 CXorf40AQ8TE69 158 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 OR4K3Q96R72 315 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 OR52E6Q96RD3 313 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 DHRS9Q9BPW9 319 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 EBPLQ9BY08 206 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 ZCCHC2Q9C0B9 1178 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 MMP27Q9H306 513 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 TOR3AQ9H497 397 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 TRPV4Q9HBA0 871 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 OSGIN1Q9UJX0 560 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 ATG2AQ2TAZ0 1938 aa16.42■□□□□ 0.22
SHKBP1-205ENST00000594973 GRXCR2A6NFK2 248 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 SLC1A7O00341 560 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 IL6P05231 212 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 EMX1Q04741 257 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 FCHO2Q0JRZ9 810 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 DOC2AQ14183 400 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 FXNQ16595 210 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 MEP1AQ16819 746 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 ZCCHC8Q6NZY4 707 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 FAM20CQ8IXL6 584 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 PJA1Q8NG27 643 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 PROX1Q92786 737 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 BIRC7Q96CA5 298 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 THUMPD3Q9BV44 507 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 DZANK1Q9NVP4 752 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 ASIC5Q9NY37 505 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 OBP2AQ9NY56 170 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 MAU2Q9Y6X3 613 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 C1QTNF3-AMACRE9PGA6 284 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 NPC1O15118 1278 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 AXIN1O15169 862 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 LILRB5O75023 590 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 FKBP9O95302 570 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 ZNF8P17098 575 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 SDC1P18827 310 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 PRKACBP22694 351 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 ADNP2Q6IQ32 1131 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 DOK6Q6PKX4 331 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 ANKRD46Q86W74 232 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 ZNF547Q8IVP9 402 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms