RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PTRH1Q86Y79 214 aaKnown RBP13.18□□□□□ -0.3
TPM1-215ENST00000558868 AQP12AQ8IXF9 295 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 HIPK4Q8NE63 616 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 OR7A2PQ8NGA2 310 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 WDR48Q8TAF3 677 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.18□□□□□ -0.3
TPM1-215ENST00000558868 CREB3L4Q8TEY5 395 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 JPH3Q8WXH2 748 aaPredicted RBP13.18□□□□□ -0.3
TPM1-215ENST00000558868 GFM2Q969S9 779 aaKnown RBP13.18□□□□□ -0.3
TPM1-215ENST00000558868 COL26A1Q96A83 441 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 PPCDCQ96CD2 204 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 F2RL3Q96RI0 385 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 ECSITQ9BQ95 431 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 EFHD1Q9BUP0 239 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 REXO4Q9GZR2 422 aaKnown RBP13.18□□□□□ -0.3
TPM1-215ENST00000558868 PAIP1Q9H074 479 aaKnown RBP13.18□□□□□ -0.3
TPM1-215ENST00000558868 UCK1Q9HA47 277 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 ACTR10Q9NZ32 417 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 SLAMF8Q9P0V8 285 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 ACTR3BQ9P1U1 418 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 SNX13Q9Y5W8 968 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 ZFHX4Q86UP3 3567 aa13.18□□□□□ -0.3
TPM1-215ENST00000558868 FANCMQ8IYD8 2048 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 GSAPA4D1B5 854 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 GABRR3A8MPY1 467 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 EVPLLA8MZ36 301 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 PLPP1O14494 284 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 HAT1O14929 419 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 LCMT2O60294 686 aaKnown RBP13.17□□□□□ -0.3
TPM1-215ENST00000558868 DFNA5O60443 496 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 TBX19O60806 448 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 GPR37L1O60883 481 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 GUCY1B2O75343 617 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 BAG2O95816 211 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 SERPIND1P05546 499 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 C8BP07358 591 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 UGT2B7P16662 529 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 PPIBP23284 216 aaKnown RBP13.17□□□□□ -0.3
TPM1-215ENST00000558868 MAOBP27338 520 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 MSX2P35548 267 aaPredicted RBP13.17□□□□□ -0.3
TPM1-215ENST00000558868 BSGP35613 385 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 BCL6P41182 706 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 GRIA3P42263 894 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 TSFMP43897 325 aaKnown RBP13.17□□□□□ -0.3
TPM1-215ENST00000558868 AFF3P51826 1226 aaKnown RBP13.17□□□□□ -0.3
TPM1-215ENST00000558868 MAPK12P53778 367 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 TAS2R50P59544 299 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 STXBP1P61764 594 aaKnown RBP13.17□□□□□ -0.3
TPM1-215ENST00000558868 PHC1P78364 1004 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 HHEXQ03014 270 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 CYP4F3Q08477 520 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 C1orf61Q13536 156 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 PDE7AQ13946 482 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 HEPACAMQ14CZ8 416 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 IRAK1BP1Q5VVH5 260 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 FAM71E1Q6IPT2 247 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 WDR5BQ86VZ2 330 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 OOSP2Q86WS3 158 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 NAGSQ8N159 534 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 FBXL6Q8N531 539 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 FAM156AQ8NDB6 213 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 LMX1AQ8TE12 382 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 NUDT8Q8WV74 236 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 PYDC1Q8WXC3 89 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 POP5Q969H6 163 aaKnown RBP13.17□□□□□ -0.3
TPM1-215ENST00000558868 DUS3LQ96G46 650 aaKnown RBP13.17□□□□□ -0.3
TPM1-215ENST00000558868 CCDC115Q96NT0 180 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 OR2A14Q96R47 310 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 PANX1Q96RD7 426 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 PHOX2BQ99453 314 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 THUMPD3Q9BV44 507 aaKnown RBP13.17□□□□□ -0.3
TPM1-215ENST00000558868 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.17□□□□□ -0.3
TPM1-215ENST00000558868 PCDHAC1Q9H158 963 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 VCX3BQ9H321 246 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 SERHLQ9NQF3 203 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 C6orf203Q9P0P8 240 aaPredicted RBP13.17□□□□□ -0.3
TPM1-215ENST00000558868 SH3BP4Q9P0V3 963 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 DLGAP2Q9P1A6 1054 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 MAGEL2Q9UJ55 1249 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 PCDHGB4Q9UN71 923 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 PCDHB3Q9Y5E6 796 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 PCDHGA4Q9Y5G9 962 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 KLK4Q9Y5K2 254 aa13.17□□□□□ -0.3
TPM1-215ENST00000558868 TRBV5-3A0A0A0MS03 114 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 TCRBV3S1A0A5B6 114 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 LRIT2A6NDA9 550 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 B4DGG1 531 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 RNASET2O00584 256 aaKnown RBP13.16□□□□□ -0.3
TPM1-215ENST00000558868 NVLO15381 856 aaKnown RBP13.16□□□□□ -0.3
TPM1-215ENST00000558868 BCAT2O15382 392 aaPredicted RBP13.16□□□□□ -0.3
TPM1-215ENST00000558868 ANXA6P08133 673 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 CELA2BP08218 269 aaPredicted RBP13.16□□□□□ -0.3
TPM1-215ENST00000558868 FURINP09958 794 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 ZCCHC18P0CG32 403 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 LAMP1P11279 417 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 POLR2CP19387 275 aaPredicted RBP13.16□□□□□ -0.3
TPM1-215ENST00000558868 BCKDHBP21953 392 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 TPP2P29144 1249 aaPredicted RBP13.16□□□□□ -0.3
TPM1-215ENST00000558868 VHLP40337 213 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms