RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 WNT3P56703 355 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 SF3B4Q15427 424 aaKnown RBP eCLIP11.06□□□□□ -0.642e-8■■■■□ 26.4
DDB1-224ENST00000545894 UGT8Q16880 541 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 FBXO43Q4G163 708 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 DESI1Q6ICB0 168 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 SYT12Q8IV01 421 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 NXPE1Q8N323 547 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 TCAIMQ8N3R3 496 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 SYNPOQ8N3V7 929 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 PARP16Q8N5Y8 322 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 PAF1Q8N7H5 531 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 ARL14EPQ8N8R7 260 aaPredicted RBP11.06□□□□□ -0.64
DDB1-224ENST00000545894 GGHQ92820 318 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 CDADC1Q9BWV3 514 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 EBPLQ9BY08 206 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 TM6SF2Q9BZW4 377 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 RUBCNLQ9H714 662 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 FAM120CQ9NX05 1096 aaKnown RBP11.06□□□□□ -0.64
DDB1-224ENST00000545894 SPASTQ9UBP0 616 aa11.06□□□□□ -0.64
DDB1-224ENST00000545894 HAT1O14929 419 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 MED26O95402 600 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 CPSF4O95639 269 aaKnown RBP11.05□□□□□ -0.64
DDB1-224ENST00000545894 IRF1P10914 325 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 COX7A2P14406 83 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 ZNF24P17028 368 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 GTF2E2P29084 291 aaKnown RBP11.05□□□□□ -0.64
DDB1-224ENST00000545894 SPAM1P38567 509 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 KCNJ10P78508 379 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 TFF2Q03403 129 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 SMAD4Q13485 552 aaKnown RBP11.05□□□□□ -0.64
DDB1-224ENST00000545894 ARHGAP15Q53QZ3 475 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 FRG2Q64ET8 278 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 Q6ZPB1 254 aaPredicted RBP11.05□□□□□ -0.64
DDB1-224ENST00000545894 UBE2R2Q712K3 238 aaPredicted RBP11.05□□□□□ -0.64
DDB1-224ENST00000545894 CCDC80Q76M96 950 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 GET4Q7L5D6 327 aaPredicted RBP11.05□□□□□ -0.64
DDB1-224ENST00000545894 ZSWIM9Q86XI8 627 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 SYTL1Q8IYJ3 562 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 OR6K2Q8NGY2 324 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 ZNF675Q8TD23 568 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 CHAC2Q8WUX2 184 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 FGF13Q92913 245 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 FRG2BQ96QU4 278 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 NOTCH4Q99466 2003 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 SPATA9Q9BWV2 254 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 PRDM8Q9NQV8 689 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 FKBP14Q9NWM8 211 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 ADPRHL2Q9NX46 363 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 LOC100506127A0A0U1RQW1 187 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 SERTM1A2A2V5 107 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 PSMD11O00231 422 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 SUV39H1O43463 412 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 ALOX12P18054 663 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 DDX6P26196 483 aaKnown RBP eCLIP11.05□□□□□ -0.643e-13■□□□□ 10.6
DDB1-224ENST00000545894 RRM2P31350 389 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 GRK5P34947 590 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 RCVRNP35243 200 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 HNF1BP35680 557 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 CASP3P42574 277 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 NSG1P42857 185 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 PXNP49023 591 aaPredicted RBP11.05□□□□□ -0.64
DDB1-224ENST00000545894 CDKN3Q16667 212 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 ZXDCQ2QGD7 858 aaPredicted RBP11.05□□□□□ -0.64
DDB1-224ENST00000545894 LEXMQ3ZCV2 418 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 HEATR4Q86WZ0 1026 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 NPAS3Q8IXF0 933 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 CLECL1Q8IZS7 167 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 METTL4Q8N3J2 472 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 OR8J2Q8NGG1 315 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 FCRL1Q96LA6 429 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 NECTIN4Q96NY8 510 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 MYADMQ96S97 322 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 SLC12A9Q9BXP2 914 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 SMG9Q9H0W8 520 aaKnown RBP11.05□□□□□ -0.64
DDB1-224ENST00000545894 TPT1P8Q9HAU6 139 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 AMBNQ9NP70 447 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 KLHL42Q9P2K6 505 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 RAPGEFL1Q9UHV5 662 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 PADI2Q9Y2J8 665 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 PCDHB11Q9Y5F2 797 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 PCDHGA3Q9Y5H0 932 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 PEX16Q9Y5Y5 336 aa11.05□□□□□ -0.64
DDB1-224ENST00000545894 TRAV19A0A0A6YYK7 116 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 K7ERQ8 282 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 TBL1XO60907 577 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 OLFM2O95897 454 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 C8GP07360 202 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 HIST1H2AGP0C0S8 130 aaPredicted RBP11.04□□□□□ -0.64
DDB1-224ENST00000545894 HIST1H2ADP20671 130 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 AOAHP28039 575 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 SLC6A12P48065 614 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 HNMTP50135 292 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 DEFA1P59665 94 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 DEFA3P59666 94 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 ZXDBP98169 803 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 BCL2L1Q07817 233 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 PTCHD3Q3KNS1 767 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 FAM124AQ86V42 546 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 CCDC103Q8IW40 242 aa11.04□□□□□ -0.64
DDB1-224ENST00000545894 CBARPQ8N350 705 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms