RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 H0YIG0 161 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 SIX3O95343 332 aaPredicted RBP10.46□□□□□ -0.73
DDB1-222ENST00000543627 ONECUT2O95948 504 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 PYGBP11216 843 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 ACPPP15309 386 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 KRT15P19012 456 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 GCAP28676 217 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 EEF1DP29692 281 aaKnown RBP10.46□□□□□ -0.73
DDB1-222ENST00000543627 PLA2G16P53816 162 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 ALDH18A1P54886 795 aaKnown RBP10.46□□□□□ -0.73
DDB1-222ENST00000543627 VSNL1P62760 191 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 ACTN3Q08043 901 aaPredicted RBP10.46□□□□□ -0.73
DDB1-222ENST00000543627 TSNAXIP1Q2TAA8 658 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 TUBB8Q3ZCM7 444 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 TECRLQ5HYJ1 363 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 CDKL4Q5MAI5 379 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 DCAF10Q5QP82 559 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 ADNP2Q6IQ32 1131 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 ADGRD1Q6QNK2 874 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 KIRREL2Q6UWL6 708 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 PDSS2Q86YH6 399 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 GALNT16Q8N428 558 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 RHEBL1Q8TAI7 183 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 NT5CQ8TCD5 201 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 UTP15Q8TED0 518 aaKnown RBP10.46□□□□□ -0.73
DDB1-222ENST00000543627 MTFMTQ96DP5 389 aaKnown RBP10.46□□□□□ -0.73
DDB1-222ENST00000543627 GPR78Q96P69 363 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 NUDT9Q9BW91 350 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 TRIM4Q9C037 500 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 ACTR8Q9H981 624 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 C14orf105Q9NVL8 296 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 GPR83Q9NYM4 423 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 LUZP4Q9P127 313 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 MAP10Q9P2G4 905 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 PSMC3IPQ9P2W1 217 aaPredicted RBP10.46□□□□□ -0.73
DDB1-222ENST00000543627 XPR1Q9UBH6 696 aa10.46□□□□□ -0.73
DDB1-222ENST00000543627 NSG1A0A0A6YYJ2 146 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 IGHV3-20A0A0C4DH32 117 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 PSMD12O00232 456 aaPredicted RBP10.45□□□□□ -0.74
DDB1-222ENST00000543627 SAP18O00422 153 aaKnown RBP10.45□□□□□ -0.74
DDB1-222ENST00000543627 SOCS6O14544 535 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 ERI3O43414 337 aaKnown RBP10.45□□□□□ -0.74
DDB1-222ENST00000543627 CHST10O43529 356 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 PRAMEF4O60810 478 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 BMP10O95393 424 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 TGFB1P01137 390 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 PDGFAP04085 211 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 SERPINA6P08185 405 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 C8orf89P0DMQ9 161 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 MTHFD2P13995 350 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 PIK3CGP48736 1102 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 STXBP1P61764 594 aaKnown RBP10.45□□□□□ -0.74
DDB1-222ENST00000543627 SKP1P63208 163 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 IFFO1Q0D2I5 559 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 LAPTM5Q13571 262 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 GTF2H2Q13888 395 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 SETDB1Q15047 1291 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 PRAMEF9Q5VWM5 478 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 GTF2H2CQ6P1K8 395 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 MED27Q6P2C8 311 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 GOLGA7Q7Z5G4 137 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 ZC3H7AQ8IWR0 971 aaKnown RBP10.45□□□□□ -0.74
DDB1-222ENST00000543627 KLHDC8AQ8IYD2 350 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 CYP4X1Q8N118 509 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 ARHGEF39Q8N4T4 335 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 AMER2Q8N7J2 671 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 TTLQ8NG68 377 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 PPP4R1Q8TF05 950 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 ZBTB9Q96C00 473 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 MTBPQ96DY7 904 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 THOC3Q96J01 351 aaKnown RBP10.45□□□□□ -0.74
DDB1-222ENST00000543627 CDK15Q96Q40 435 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 F2RL3Q96RI0 385 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 EFCAB11Q9BUY7 163 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 TXLNGYQ9BZA5 131 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 NOL11Q9H8H0 719 aaKnown RBP10.45□□□□□ -0.74
DDB1-222ENST00000543627 IPPKQ9H8X2 491 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 COPS7BQ9H9Q2 264 aaPredicted RBP10.45□□□□□ -0.74
DDB1-222ENST00000543627 ENAMQ9NRM1 1142 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 TUBD1Q9UJT1 453 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 ZNF490Q9ULM2 529 aaPredicted RBP10.45□□□□□ -0.74
DDB1-222ENST00000543627 TNPO3Q9Y5L0 923 aaKnown RBP10.45□□□□□ -0.74
DDB1-222ENST00000543627 SLC22A7Q9Y694 548 aa10.45□□□□□ -0.74
DDB1-222ENST00000543627 BOD1L1Q8NFC6 3051 aa10.44□□□□□ -0.74
DDB1-222ENST00000543627 A0A1W2PPM1 405 aa10.44□□□□□ -0.74
DDB1-222ENST00000543627 A8MUA0 341 aa10.44□□□□□ -0.74
DDB1-222ENST00000543627 FAM227AF5H4B4 570 aa10.44□□□□□ -0.74
DDB1-222ENST00000543627 GALR3O60755 368 aaPredicted RBP10.44□□□□□ -0.74
DDB1-222ENST00000543627 COL6A2P12110 1019 aa10.44□□□□□ -0.74
DDB1-222ENST00000543627 TSPAN8P19075 237 aa10.44□□□□□ -0.74
DDB1-222ENST00000543627 EPORP19235 508 aa10.44□□□□□ -0.74
DDB1-222ENST00000543627 CD22P20273 847 aa10.44□□□□□ -0.74
DDB1-222ENST00000543627 TAC1P20366 129 aa10.44□□□□□ -0.74
DDB1-222ENST00000543627 HNRNPH1P31943 449 aaKnown RBP10.44□□□□□ -0.74
DDB1-222ENST00000543627 AIMP2Q13155 320 aaKnown RBP10.44□□□□□ -0.74
DDB1-222ENST00000543627 CPSF6Q16630 551 aaKnown RBP eCLIP10.44□□□□□ -0.74
DDB1-222ENST00000543627 ERCC6LQ2NKX8 1250 aa10.44□□□□□ -0.74
DDB1-222ENST00000543627 TTC19Q6DKK2 380 aaPredicted RBP10.44□□□□□ -0.74
DDB1-222ENST00000543627 TCTN3Q6NUS6 607 aa10.44□□□□□ -0.74
DDB1-222ENST00000543627 TRIM40Q6P9F5 258 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms