RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 MID2Q9UJV3 735 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 ZNF225Q9UK10 706 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 TSC22D4Q9Y3Q8 395 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 SPENQ96T58 3664 aaKnown RBP17.25■□□□□ 0.35
VEGFA-222ENST00000520948 NBASA2RRP1 2371 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 A0A1B0GTL3 188 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 MEN1O00255 615 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 DSCR3O14972 297 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 PRPF4O43172 522 aaKnown RBP eCLIP17.24■□□□□ 0.355e-8■■■□□ 16
VEGFA-222ENST00000520948 SASH3O75995 380 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 SUPT7LO94864 414 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 TBX6O95947 436 aaPredicted RBP17.24■□□□□ 0.35
VEGFA-222ENST00000520948 ITGAXP20702 1163 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 GSTM2P28161 218 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 HNF4AP41235 474 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 NAA20P61599 178 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 CLCQ05315 142 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 KLRB1Q12918 225 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 RBBP5Q15291 538 aaKnown RBP17.24■□□□□ 0.35
VEGFA-222ENST00000520948 CRTC2Q53ET0 693 aaPredicted RBP17.24■□□□□ 0.35
VEGFA-222ENST00000520948 LCN10Q6JVE6 187 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 VN1R5Q7Z5H4 357 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 CAMKVQ8NCB2 501 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 TRPV3Q8NET8 790 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 ARL8AQ96BM9 186 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 CLIP3Q96DZ5 547 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 GBP5Q96PP8 586 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 MACROD1Q9BQ69 325 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 NDC1Q9BTX1 674 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 STMN4Q9H169 189 aaPredicted RBP17.24■□□□□ 0.35
VEGFA-222ENST00000520948 GSTO2Q9H4Y5 243 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 SEMA4BQ9NPR2 832 aaPredicted RBP17.24■□□□□ 0.35
VEGFA-222ENST00000520948 LHX9Q9NQ69 397 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 ACSS2Q9NR19 701 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 PADI1Q9ULC6 663 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 RNF11Q9Y3C5 154 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 FER1L5A0AVI2 2057 aa17.24■□□□□ 0.35
VEGFA-222ENST00000520948 CDC14CA4D256 554 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 CLEC18AA5D8T8 446 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 GOLGA6L10A6NI86 522 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 H0YIV9 168 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 FOXS1O43638 330 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 CLDN9O95484 217 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 CAPN1P07384 714 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 DHRS4L1P0CG22 281 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 SMIM10L1P0DMW3 83 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 ALDH3A1P30838 453 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 NAGLUP54802 743 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 MLLT10P55197 1068 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 FAM53BQ14153 422 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 HIST2H2ACQ16777 129 aaPredicted RBP17.23■□□□□ 0.35
VEGFA-222ENST00000520948 MUM1Q2TAK8 710 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 PAGE2BQ5JRK9 111 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 HIST2H2AA3Q6FI13 130 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 TMEM214Q6NUQ4 689 aaKnown RBP17.23■□□□□ 0.35
VEGFA-222ENST00000520948 CLEC18BQ6UXF7 455 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 TTLL10Q6ZVT0 673 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 C10orf107Q8IVU9 208 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 CCDC63Q8NA47 563 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 KCT2Q8NC54 265 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 CLEC18CQ8NCF0 446 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 TTLQ8NG68 377 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 OR7G3Q8NG95 312 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 PROKR1Q8TCW9 393 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 SMIM10Q96HG1 83 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 PKNOX2Q96KN3 472 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 DPH2Q9BQC3 489 aaPredicted RBP17.23■□□□□ 0.35
VEGFA-222ENST00000520948 SLC6A16Q9GZN6 736 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 AICDAQ9GZX7 198 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 ACTR8Q9H981 624 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 ZNF446Q9NWS9 450 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 IRAK4Q9NWZ3 460 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 POLHQ9Y253 713 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 MAN2B2Q9Y2E5 1009 aa17.23■□□□□ 0.35
VEGFA-222ENST00000520948 MRPS2Q9Y399 296 aaKnown RBP17.23■□□□□ 0.35
VEGFA-222ENST00000520948 TNRC6AQ8NDV7 1962 aaKnown RBP17.22■□□□□ 0.35
VEGFA-222ENST00000520948 A0A1B0GX78 115 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 MKRN2OSH3BPM6 223 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 TM9SF1O15321 606 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 TRIM13O60858 407 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 CLEC3AO75596 197 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 STATHP02808 62 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 KLK3P07288 261 aaPredicted RBP17.22■□□□□ 0.35
VEGFA-222ENST00000520948 SERPINA6P08185 405 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 CCNYL3P0C7X3 344 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 GP1BBP13224 206 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 TSPAN8P19075 237 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 CCNG1P51959 295 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 SLC18A1P54219 525 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 MAGOHP61326 146 aaKnown RBP17.22■□□□□ 0.35
VEGFA-222ENST00000520948 GGTA1PQ4G0N0 100 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 LIPMQ5VYY2 423 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 ADNP2Q6IQ32 1131 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 MED27Q6P2C8 311 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 FAM199XQ6PEV8 388 aaPredicted RBP17.22■□□□□ 0.35
VEGFA-222ENST00000520948 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.22■□□□□ 0.351e-6■■■■■ 40.2
VEGFA-222ENST00000520948 DTWD1Q8N5C7 304 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 OR4F6Q8NGB9 312 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 OR6Y1Q8NGX8 325 aa17.22■□□□□ 0.35
VEGFA-222ENST00000520948 WDR20Q8TBZ3 569 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms