RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 RGL4Q8IZJ4 473 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 MEIOBQ8N635 442 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 NAT8LQ8N9F0 302 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ABHD11Q8NFV4 315 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 SLC13A3Q8WWT9 602 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ASB17Q8WXJ9 295 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CMKLR1Q99788 373 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 TBL1XR1Q9BZK7 514 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 KATNBL1Q9H079 304 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CST11Q9H112 138 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ZBTB26Q9HCK0 441 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF391Q9UJN7 358 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 TBC1D3DA0A087WVF3 549 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TBC1D3IA0A087WXS9 549 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TBC1D3EA0A087X179 549 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TBC1D3KA0A087X1G2 549 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TBC1D3FA6NER0 549 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TBC1D3LB9A6J9 549 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 PLIN3O60664 434 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 INHAP05111 366 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 PROS1P07225 676 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TBC1D3HP0C7X1 549 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 IL7RP16871 459 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 IGFBP5P24593 272 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 MSX1P28360 303 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CD52P31358 61 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CRATP43155 626 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 HNRNPFP52597 415 aaKnown RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 USP46P62068 366 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 PLP2Q04941 152 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 LIPEQ05469 1076 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 PCBP2Q15366 365 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 IQCCQ4KMZ1 466 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TBC1D3GQ6DHY5 549 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TBC1D3CQ6IPX1 549 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 LYSMD3Q7Z3D4 306 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 PIGWQ7Z7B1 504 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 IQCHQ86VS3 1027 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CNTN4Q8IWV2 1026 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TBC1D3Q8IZP1 549 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 KLHL36Q8N4N3 616 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 WDSUB1Q8N9V3 476 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SLC5A11Q8WWX8 675 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 JPH3Q8WXH2 748 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SLC35G5Q96KT7 338 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SLC4A9Q96Q91 983 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 AARSD1Q9BTE6 412 aaKnown RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CFHR5Q9BXR6 569 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SEMA4AQ9H3S1 761 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 PTGFRNQ9P2B2 879 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 EML5Q05BV3 1969 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CCRL2O00421 344 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 FAAHO00519 579 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SOX15O60248 233 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 PPARDQ03181 441 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 FGD3Q5JSP0 725 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 C1orf53Q5VUE5 145 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 OGFOD2Q6N063 350 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 PTCHD4Q6ZW05 846 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ILDR1Q86SU0 546 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 FAM46DQ8NEK8 389 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ELP5Q8TE02 316 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TESCQ96BS2 214 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 L3HYPDHQ96EM0 354 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 UNKQ9C0B0 810 aaKnown RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 C12orf4Q9NQ89 552 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 KLK14Q9P0G3 267 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 INSL5Q9Y5Q6 135 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 A0A1W2PPH5 198 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 DPPA5A6NC42 116 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF726A6NNF4 738 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 KCNK1O00180 336 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TNFRSF10CO14798 259 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ZBTB39O15060 712 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 GSC2O15499 205 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CLEC3AO75596 197 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 DDNO94850 711 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 UGT1A1P22309 533 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 FMO4P31512 558 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SSBP1Q04837 148 aaKnown RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CBLBQ13191 982 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ADAM15Q13444 863 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CAMK1Q14012 370 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CA9Q16790 459 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 MYLK3Q32MK0 819 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF829Q3KNS6 432 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 PIK3R6Q5UE93 754 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 KCTD11Q693B1 232 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 DNAJC14Q6Y2X3 702 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SHFQ7M4L6 423 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TMEM135Q86UB9 458 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 IFNEQ86WN2 208 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 LIX1Q8N485 282 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 BANPQ8N9N5 519 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 OR56A3Q8NH54 315 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 BIRC8Q96P09 236 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 OR2M4Q96R27 311 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 JAM3Q9BX67 310 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 GLIS2Q9BZE0 524 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms