RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 CCT5P48643 541 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 OLR1P78380 273 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 DDX39BQ13838 428 aaKnown RBP12.88□□□□□ -0.35
FDPS-219ENST00000495308 RBBP7Q16576 425 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 TBR1Q16650 682 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 DEFB134Q4QY38 66 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 VWA2Q5GFL6 755 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 ZNF678Q5SXM1 525 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 METTL2BQ6P1Q9 378 aaKnown RBP12.88□□□□□ -0.35
FDPS-219ENST00000495308 LAS2Q8IYD9 372 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 IQCKQ8N0W5 287 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 AFAP1L2Q8N4X5 818 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 CCDC63Q8NA47 563 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 TTLQ8NG68 377 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 OR5T3Q8NGG3 340 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 OR2Y1Q8NGV0 311 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 STT3BQ8TCJ2 826 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 ADAMTS17Q8TE56 1095 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 UTP15Q8TED0 518 aaKnown RBP12.88□□□□□ -0.35
FDPS-219ENST00000495308 ZNF483Q8TF39 744 aaPredicted RBP12.88□□□□□ -0.35
FDPS-219ENST00000495308 EXTL1Q92935 676 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 ATP6V1E2Q96A05 226 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 APOPT1Q96IL0 206 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 SPSB2Q99619 263 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 PITHD1Q9GZP4 211 aaPredicted RBP12.88□□□□□ -0.35
FDPS-219ENST00000495308 SLC26A1Q9H2B4 701 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 TRPC4Q9UBN4 977 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 ZNF282Q9UDV7 671 aaPredicted RBP12.88□□□□□ -0.35
FDPS-219ENST00000495308 GRID1Q9ULK0 1009 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 RNF11Q9Y3C5 154 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 SLC22A7Q9Y694 548 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 CACNA1GO43497 2377 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 MED13Q9UHV7 2174 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 FAM208BQ5VWN6 2430 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 A0A1B0GTL3 188 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 VSTM2BA6NLU5 285 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 H0YIG0 161 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 PPP6CO00743 305 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 GALR3O60755 368 aaPredicted RBP12.87□□□□□ -0.35
FDPS-219ENST00000495308 DNAJB6O75190 326 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 SH3BGRLO75368 114 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 CLEC3AO75596 197 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 SUPT7LO94864 414 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 ALBP02768 609 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 ZGLP1P0C6A0 271 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 MYL2P10916 166 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 CREB1P16220 341 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 CCNG1P51959 295 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 CDH13P55290 713 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 HERVK_113P63132 956 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 OCA2Q04671 838 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 KLC1Q07866 573 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 PCDH1Q08174 1060 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 TRAF3Q13114 568 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 HERC3Q15034 1050 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 CPSF6Q16630 551 aaKnown RBP eCLIP12.87□□□□□ -0.35
FDPS-219ENST00000495308 CCDC153Q494R4 210 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 CRTC2Q53ET0 693 aaPredicted RBP12.87□□□□□ -0.35
FDPS-219ENST00000495308 UNC50Q53HI1 259 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 BEND6Q5SZJ8 279 aaPredicted RBP12.87□□□□□ -0.35
FDPS-219ENST00000495308 CEP85LQ5SZL2 805 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 LIPJQ5W064 366 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 MED27Q6P2C8 311 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 ABHD13Q7L211 337 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 BANPQ8N9N5 519 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 OR7G3Q8NG95 312 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 ZNF473Q8WTR7 871 aaKnown RBP12.87□□□□□ -0.35
FDPS-219ENST00000495308 TTC9Q92623 222 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 MIEF2Q96C03 454 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 C1QTNF3Q9BXJ4 246 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 ERVK-6Q9BXR3 956 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 FAM117AQ9C073 453 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 RHBGQ9H310 441 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 CENPHQ9H3R5 247 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 WDR54Q9H977 334 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 MKS1Q9NXB0 559 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 MAP4K5Q9Y4K4 846 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 CFAP46Q8IYW2 2715 aa12.87□□□□□ -0.35
FDPS-219ENST00000495308 ATRXP46100 2492 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 IGLV3-12A0A075B6K2 115 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 LRIT2A6NDA9 550 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 URADA6NGE7 173 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 RGS16O15492 202 aaPredicted RBP12.86□□□□□ -0.35
FDPS-219ENST00000495308 ERI3O43414 337 aaKnown RBP12.86□□□□□ -0.35
FDPS-219ENST00000495308 UGDHO60701 494 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 JRKO75564 520 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 CLDN9O95484 217 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 CD63P08962 238 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 SMIM10L1P0DMW3 83 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 GSTM2P28161 218 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 PLA2G16P53816 162 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 PRKAA2P54646 552 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 STXBP1P61764 594 aaKnown RBP12.86□□□□□ -0.35
FDPS-219ENST00000495308 RHDQ02161 417 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 CLCQ05315 142 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 LINC00303Q3SY05 128 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 CPZQ66K79 652 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 BORAQ6PGQ7 559 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 ZYG11AQ6WRX3 759 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 LAPTM4BQ86VI4 370 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms