RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 GRK3P35626 688 aa13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 SLC26A5P58743 744 aa13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 PDAP1Q13442 181 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 ART3Q13508 389 aa13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 NSDHLQ15738 373 aa13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 HP1BP3Q5SSJ5 553 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 FAM45BPQ6NSW5 357 aa13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 SIAH3Q8IW03 269 aa13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 PALM2Q8IXS6 379 aa13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 KLHDC8AQ8IYD2 350 aa13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 NFAM1Q8NET5 270 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 FAM45AQ8TCE6 357 aa13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 CREB3L4Q8TEY5 395 aa13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 ALKBH8Q96BT7 664 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 TBC1D20Q96BZ9 403 aa13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 CCDC120Q96HB5 630 aa13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 TRIM45Q9H8W5 580 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 CHMP2BQ9UQN3 213 aa13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 POLQO75417 2590 aa13.53□□□□□ -0.24
TNFRSF1A-203ENST00000437813 TCRBV16S1A1N1A0A5B0 115 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 USP27XA6NNY8 438 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 A8MUI8 341 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 CDC7O00311 574 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 SEC31AO94979 1220 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 TBX6O95947 436 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 HIST1H2AGP0C0S8 130 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 ZNF888P0CJ79 500 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 TCP1P17987 556 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 HIST1H2ADP20671 130 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 GRNP28799 593 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 ST13P50502 369 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 OLR1P78380 273 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 CDKL1Q00532 357 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 FASTKD3Q14CZ7 662 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 MEP1AQ16819 746 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 MFSD4BQ5TF39 518 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 ZNF468Q5VIY5 522 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 Q6ZPB1 254 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 QSOX2Q6ZRP7 698 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 SYDE1Q6ZW31 735 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 PDIK1LQ8N165 341 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 KIF2BQ8N4N8 673 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 GPATCH11Q8N954 259 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 GABPB2Q8TAK5 448 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 THAP3Q8WTV1 239 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 SLC5A11Q8WWX8 675 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 ATL1Q8WXF7 558 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 HIST1H2AHQ96KK5 128 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 FRMD6Q96NE9 622 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 LPAR4Q99677 370 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 HIST1H2AJQ99878 128 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 H2AFJQ9BTM1 129 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 PELI2Q9HAT8 420 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 CLK4Q9HAZ1 481 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 KCNK13Q9HB14 408 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 COPG2Q9UBF2 871 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 SEC14L3Q9UDX4 400 aa13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 KLF2Q9Y5W3 355 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-203ENST00000437813 CDK2AP1O14519 115 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 HNRNPRO43390 633 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 GUCA1CO95843 209 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 SLC6A12P48065 614 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 TAS2R39P59534 338 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 BTG2P78543 158 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 CSHL1Q14406 222 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 OR1C1Q15619 314 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 RNFT1Q5M7Z0 435 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 SP5Q6BEB4 398 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 SPINK14Q6IE38 97 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 NXPE4Q6UWF7 544 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 THOC6Q86W42 341 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 CEP97Q8IW35 865 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 ANKRD49Q8WVL7 239 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 MARVELD3Q96A59 401 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 CFAP36Q96G28 342 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 TSNARE1Q96NA8 513 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 TRIM51Q9BSJ1 452 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 KLHL31Q9H511 634 aa13.51□□□□□ -0.25
TNFRSF1A-203ENST00000437813 GABRR3A8MPY1 467 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 ZSCAN12O43309 604 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 SLC19A2O60779 497 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 PRAMEF4O60810 478 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 C1QAP02745 245 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 SERPINA6P08185 405 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 ITGA8P53708 1063 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 OR4D2P58180 307 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 ADORA2A-AS1P86434 159 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 MGAT5Q09328 741 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 ZNF460Q14592 562 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 PRAMEF9Q5VWM5 478 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 NIPAL1Q6NVV3 410 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 SLCO4C1Q6ZQN7 724 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 SLC5A8Q8N695 610 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 APCDD1LQ8NCL9 501 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 SUN3Q8TAQ9 357 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 ADAMTS18Q8TE60 1221 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 GPR137Q96N19 417 aa13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 UTP23Q9BRU9 249 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-203ENST00000437813 TRIM54Q9BYV2 358 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms