RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 RB1P06400 928 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 CTSEP14091 401 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 ACSL1P33121 698 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 RBBP4Q09028 425 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 TMIGD1Q6UXZ0 262 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 NDNFQ8TB73 568 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 SLC22A17Q8WUG5 538 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 AUTS2Q8WXX7 1259 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 UBXN10Q96LJ8 280 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 TBX5Q99593 518 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 KLHL31Q9H511 634 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 TIGARQ9NQ88 270 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 COLEC10Q9Y6Z7 277 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 CPSF4LA6NMK7 179 aaKnown RBP16.81■□□□□ 0.28
PTPRU-202ENST00000373779 FAM47E-STBD1D6RA91 191 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 RLN1P04808 185 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 ZNF865P0CJ78 1059 aaPredicted RBP16.81■□□□□ 0.28
PTPRU-202ENST00000373779 GMFBP60983 142 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 ZNF155Q12901 538 aaPredicted RBP16.81■□□□□ 0.28
PTPRU-202ENST00000373779 C11orf91Q3C1V1 193 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 EIPR1Q53HC9 387 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 HS3ST5Q8IZT8 346 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 METTL25Q8N6Q8 603 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 C12orf66Q96MD2 445 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 TMED9Q9BVK6 235 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 SMURF1Q9HCE7 757 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 TAC3Q9UHF0 121 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 ACTL7AQ9Y615 435 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 GTPBP1O00178 669 aaKnown RBP16.81■□□□□ 0.28
PTPRU-202ENST00000373779 STC2O76061 302 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 GATMP50440 423 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 HSF2Q03933 536 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 CYP4V2Q6ZWL3 525 aaPredicted RBP16.81■□□□□ 0.28
PTPRU-202ENST00000373779 C3orf58Q8NDZ4 430 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 BOCQ9BWV1 1114 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 TSSK6Q9BXA6 273 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 C14orf119Q9NWQ9 140 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 LOC285095A0A1B0GVY8 99 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 SMIM18P0DKX4 95 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 HSD3B1P14060 373 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 HSD3B2P26439 372 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 CCND3P30281 292 aaPredicted RBP16.81■□□□□ 0.28
PTPRU-202ENST00000373779 TIA1P31483 386 aaKnown RBP eCLIP16.81■□□□□ 0.283e-7■□□□□ 8.7
PTPRU-202ENST00000373779 TGFBR2P37173 567 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 TMEM53Q6P2H8 277 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 PIWIL3Q7Z3Z3 882 aaKnown RBP16.81■□□□□ 0.28
PTPRU-202ENST00000373779 MRPL10Q7Z7H8 261 aaKnown RBP16.81■□□□□ 0.28
PTPRU-202ENST00000373779 GALNT10Q86SR1 603 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 TTLQ8NG68 377 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 CYB5D2Q8WUJ1 264 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 C17orf50Q8WW18 174 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 ZFP3Q96NJ6 502 aa16.81■□□□□ 0.28
PTPRU-202ENST00000373779 A0A1W2PQ72 361 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 FAM170BA6NMN3 283 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 CA12O43570 354 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 CPNE3O75131 537 aaKnown RBP16.8■□□□□ 0.28
PTPRU-202ENST00000373779 DCKP27707 260 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 DCDC1P59894 354 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 ARPC4P59998 168 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 PITPNAQ00169 270 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 CADM2Q8N3J6 435 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 WDR48Q8TAF3 677 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 MGLLQ99685 303 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 LAMB2P55268 1798 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 KIAA0513O60268 411 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 SLC35G6P0C7Q6 338 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 GJA1P17302 382 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 MPIP34949 423 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 CD99L2Q8TCZ2 262 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 ING5Q8WYH8 240 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 INPP5KQ9BT40 448 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 CXCL16Q9H2A7 254 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 IGFLR1Q9H665 355 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 GORASP2Q9H8Y8 452 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 MRPS30Q9NP92 439 aaKnown RBP16.8■□□□□ 0.28
PTPRU-202ENST00000373779 INTS6Q9UL03 887 aaKnown RBP16.8■□□□□ 0.28
PTPRU-202ENST00000373779 HLA-DPB1P04440 258 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 HNRNPA0Q13151 305 aaKnown RBP16.8■□□□□ 0.28
PTPRU-202ENST00000373779 FADDQ13158 208 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 ASB18Q6ZVZ8 466 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 JAZF1Q86VZ6 243 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 PELI3Q8N2H9 469 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 HEBP1Q9NRV9 189 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 DCAF13Q9NV06 445 aaKnown RBP16.8■□□□□ 0.28
PTPRU-202ENST00000373779 OLAHQ9NV23 265 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 TNFRSF10DQ9UBN6 386 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 PCDHGA8Q9Y5G5 932 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 TBC1D3DA0A087WVF3 549 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 TBC1D3IA0A087WXS9 549 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 TBC1D3EA0A087X179 549 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 TBC1D3KA0A087X1G2 549 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 ZNF840PA6NDX5 716 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 TBC1D3FA6NER0 549 aaPredicted RBP16.8■□□□□ 0.28
PTPRU-202ENST00000373779 TBC1D3LB9A6J9 549 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 ARHGEF15O94989 841 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 TBC1D3HP0C7X1 549 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 UQCRC2P22695 453 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 MAGEA8P43361 318 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 ZNF140P52738 457 aaPredicted RBP16.8■□□□□ 0.28
PTPRU-202ENST00000373779 TBC1D3GQ6DHY5 549 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms