RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 PCSK2P16519 638 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 POLR2IP36954 125 aaKnown RBP8.15□□□□□ -1.1
PTPRK-206ENST00000368215 MC1RQ01726 317 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 KRR1Q13601 381 aaKnown RBP8.15□□□□□ -1.1
PTPRK-206ENST00000368215 KCNC3Q14003 757 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 SLC9A5Q14940 896 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 ERN2Q76MJ5 926 aaKnown RBP8.15□□□□□ -1.1
PTPRK-206ENST00000368215 LILRA3Q8N6C8 439 aaPredicted RBP8.15□□□□□ -1.1
PTPRK-206ENST00000368215 UBASH3BQ8TF42 649 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 FAR1Q8WVX9 515 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 GEMIN6Q8WXD5 167 aaKnown RBP8.15□□□□□ -1.1
PTPRK-206ENST00000368215 TADA1Q96BN2 335 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 PDLIM5Q96HC4 596 aaKnown RBP8.15□□□□□ -1.1
PTPRK-206ENST00000368215 FBXL12Q9NXK8 326 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 MSRAQ9UJ68 235 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 SSR3Q9UNL2 185 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 PCDHGB5Q9Y5G0 923 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 CROCCQ5TZA2 2017 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 MYO10Q9HD67 2058 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 ARNTLO00327 626 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 TAPBPO15533 448 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 NDUFS4O43181 175 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 TBX1O43435 398 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 MT-ND2P03891 347 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 AOAHP28039 575 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 CMPK1P30085 196 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 HOXC8P31273 242 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 GRIA2P42262 883 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 AVPR1BP47901 424 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 RPP38P78345 283 aaKnown RBP8.15□□□□□ -1.1
PTPRK-206ENST00000368215 OLR1P78380 273 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 RAPSNQ13702 412 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 RUNDC3AQ59EK9 446 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 CLEC12AQ5QGZ9 265 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 DCUN1D3Q8IWE4 304 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 NEIL2Q969S2 332 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 RGMAQ96B86 450 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 KCNS3Q9BQ31 491 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 CNPPD1Q9BV87 410 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 HDHD2Q9H0R4 259 aa8.15□□□□□ -1.1
PTPRK-206ENST00000368215 IGLON5A6NGN9 336 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 TFECO14948 347 aaPredicted RBP8.15□□□□□ -1.11
PTPRK-206ENST00000368215 SUOXP51687 545 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 RPS3AP61247 264 aaKnown RBP8.15□□□□□ -1.11
PTPRK-206ENST00000368215 MRPL28Q13084 256 aaKnown RBP8.15□□□□□ -1.11
PTPRK-206ENST00000368215 MTAPQ13126 283 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 LASP1Q14847 261 aaKnown RBP8.15□□□□□ -1.11
PTPRK-206ENST00000368215 TRIQKQ629K1 86 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF57Q68EA5 555 aaPredicted RBP8.15□□□□□ -1.11
PTPRK-206ENST00000368215 LHX8Q68G74 356 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 ENPP7Q6UWV6 458 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 COMMD6Q7Z4G1 85 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 NAGSQ8N159 534 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 ASB11Q8WXH4 323 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 HERVK_113Q902F9 699 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 HPS1Q92902 700 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF583Q96ND8 569 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 MARCH7Q9H992 704 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 UTS2RQ9UKP6 389 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 GSTK1Q9Y2Q3 226 aa8.15□□□□□ -1.11
PTPRK-206ENST00000368215 A0A1W2PP55 124 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 LOC110117498-PIK3R3F6TDL0 507 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 TMCC2O75069 709 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 INMTO95050 263 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 BMP7P18075 431 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 NT5EP21589 574 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 MAGEA10P43363 369 aaPredicted RBP8.14□□□□□ -1.11
PTPRK-206ENST00000368215 CCT3P49368 545 aaKnown RBP8.14□□□□□ -1.11
PTPRK-206ENST00000368215 SLC7A9P82251 487 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 COLEC12Q5KU26 742 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 FOXB2Q5VYV0 432 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 CPXM2Q8N436 756 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 OR4E2Q8NGC2 313 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 OR52L1Q8NGH7 329 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 ALPK1Q96QP1 1244 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 GPATCH1Q9BRR8 931 aaKnown RBP8.14□□□□□ -1.11
PTPRK-206ENST00000368215 SORBS1Q9BX66 1292 aaKnown RBP8.14□□□□□ -1.11
PTPRK-206ENST00000368215 DCSTAMPQ9H295 470 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 ADAP2Q9NPF8 381 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 TAS2R9Q9NYW1 312 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 SLC1A7O00341 560 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 SCAMP2O15127 329 aaKnown RBP8.14□□□□□ -1.11
PTPRK-206ENST00000368215 C7P10643 843 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 TIMP2P16035 220 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 CD9P21926 228 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 RYKP34925 604 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 ERVFC1P60507 584 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 SLC36A3Q495N2 470 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 IQCCQ4KMZ1 466 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 MPP7Q5T2T1 576 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 TMEM236Q5W0B7 351 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF438Q7Z4V0 828 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 CARM1Q86X55 608 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 FAM86B1Q8N7N1 296 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 OR2A12Q8NGT7 310 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 SLC38A4Q969I6 547 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 OTUB2Q96DC9 234 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 PCBD2Q9H0N5 130 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 SRMSQ9H3Y6 488 aa8.14□□□□□ -1.11
PTPRK-206ENST00000368215 RDH14Q9HBH5 336 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms