RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W HXT17P53631 564 aa4.48□□□□□ -1.69
DDR48YMR173W HXT15P54854 567 aa4.48□□□□□ -1.69
DDR48YMR173W ATE1P16639 503 aa4.47□□□□□ -1.69
DDR48YMR173W ASF1P32447 279 aa4.47□□□□□ -1.69
DDR48YMR173W RMD1Q03441 430 aa4.47□□□□□ -1.69
DDR48YMR173W PPM2Q08282 695 aa4.47□□□□□ -1.69
DDR48YMR173W ACE2P21192 770 aa4.46□□□□□ -1.7
DDR48YMR173W BAS1P22035 811 aa4.46□□□□□ -1.7
DDR48YMR173W SYP1P25623 870 aaKnown RBP4.46□□□□□ -1.7
DDR48YMR173W PEP7P32609 515 aa4.46□□□□□ -1.7
DDR48YMR173W RPS26AP39938 119 aaKnown RBP4.46□□□□□ -1.7
DDR48YMR173W RPS26BP39939 119 aaKnown RBP4.46□□□□□ -1.7
DDR48YMR173W SEC8P32855 1065 aa4.45□□□□□ -1.7
DDR48YMR173W OAR1P35731 278 aa4.45□□□□□ -1.7
DDR48YMR173W MOH1P38191 138 aa4.45□□□□□ -1.7
DDR48YMR173W MND2P40577 368 aa4.45□□□□□ -1.7
DDR48YMR173W CNN1P43618 361 aa4.45□□□□□ -1.7
DDR48YMR173W MRL1Q06815 381 aa4.45□□□□□ -1.7
DDR48YMR173W TPO1Q07824 586 aa4.45□□□□□ -1.7
DDR48YMR173W ESF1Q06344 628 aaKnown RBP4.44□□□□□ -1.7
DDR48YMR173W ADY3Q07732 790 aa4.44□□□□□ -1.7
DDR48YMR173W HIS5P07172 385 aa4.43□□□□□ -1.7
DDR48YMR173W DBP5P20449 482 aaKnown RBP4.43□□□□□ -1.7
DDR48YMR173W UGA2P38067 497 aa4.43□□□□□ -1.7
DDR48YMR173W MXR1P40029 184 aa4.43□□□□□ -1.7
DDR48YMR173W FYV10P40492 516 aa4.43□□□□□ -1.7
DDR48YMR173W MPH1P40562 993 aa4.43□□□□□ -1.7
DDR48YMR173W IOC3P43596 787 aa4.43□□□□□ -1.7
DDR48YMR173W MET12P46151 657 aa4.43□□□□□ -1.7
DDR48YMR173W EXG2P52911 562 aa4.43□□□□□ -1.7
DDR48YMR173W BI4P03879 638 aa4.42□□□□□ -1.7
DDR48YMR173W HRR25P29295 494 aaKnown RBP4.42□□□□□ -1.7
DDR48YMR173W MCM2P29469 868 aa4.42□□□□□ -1.7
DDR48YMR173W POA1P38218 177 aa4.42□□□□□ -1.7
DDR48YMR173W RRT14P40470 206 aa4.42□□□□□ -1.7
DDR48YMR173W HFM1P51979 1187 aa4.42□□□□□ -1.7
DDR48YMR173W AIM39Q08223 395 aa4.42□□□□□ -1.7
DDR48YMR173W GCR1P07261 785 aa4.41□□□□□ -1.7
DDR48YMR173W PFK1P16861 987 aaKnown RBP4.41□□□□□ -1.7
DDR48YMR173W CHA4P43634 648 aa4.41□□□□□ -1.7
DDR48YMR173W RTT10Q08924 1013 aa4.41□□□□□ -1.7
DDR48YMR173W ZRG8P40021 1076 aa4.4□□□□□ -1.71
DDR48YMR173W UBA2P52488 636 aa4.4□□□□□ -1.71
DDR48YMR173W SPR28Q04921 423 aa4.4□□□□□ -1.71
DDR48YMR173W ACM1Q08981 209 aa4.4□□□□□ -1.71
DDR48YMR173W RPL11AP0C0W9 174 aaKnown RBP4.39□□□□□ -1.71
DDR48YMR173W DBP2P24783 546 aaKnown RBP4.39□□□□□ -1.71
DDR48YMR173W RAD27P26793 382 aa4.39□□□□□ -1.71
DDR48YMR173W TMA46Q12000 345 aaKnown RBP4.39□□□□□ -1.71
DDR48YMR173W RPL11BQ3E757 174 aaPredicted RBP4.39□□□□□ -1.71
DDR48YMR173W DUT1P33317 147 aa4.38□□□□□ -1.71
DDR48YMR173W SLA2P33338 968 aa4.38□□□□□ -1.71
DDR48YMR173W XYL2Q07993 356 aa4.38□□□□□ -1.71
DDR48YMR173W KCS1Q12494 1050 aa4.38□□□□□ -1.71
DDR48YMR173W ENA1P13587 1091 aa4.37□□□□□ -1.71
DDR48YMR173W RER2P35196 286 aa4.37□□□□□ -1.71
DDR48YMR173W MNR2P35724 969 aa4.37□□□□□ -1.71
DDR48YMR173W MCM7P38132 845 aa4.37□□□□□ -1.71
DDR48YMR173W GEM1P39722 662 aa4.37□□□□□ -1.71
DDR48YMR173W ENA2Q01896 1091 aa4.37□□□□□ -1.71
DDR48YMR173W GNT1Q12096 491 aa4.37□□□□□ -1.71
DDR48YMR173W ENA5Q12691 1091 aa4.37□□□□□ -1.71
DDR48YMR173W MET10P39692 1035 aa4.36□□□□□ -1.71
DDR48YMR173W MTC3P53077 123 aa4.36□□□□□ -1.71
DDR48YMR173W TIF35Q04067 274 aaKnown RBP4.36□□□□□ -1.71
DDR48YMR173W LAS17Q12446 633 aa4.36□□□□□ -1.71
DDR48YMR173W CDC34P14682 295 aa4.35□□□□□ -1.71
DDR48YMR173W THS1P04801 734 aaKnown RBP4.34□□□□□ -1.71
DDR48YMR173W RPP2AP05319 106 aaKnown RBP4.34□□□□□ -1.71
DDR48YMR173W LYP1P32487 611 aa4.34□□□□□ -1.71
DDR48YMR173W PNT1P38969 423 aa4.34□□□□□ -1.71
DDR48YMR173W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
DDR48YMR173W OYE2Q03558 400 aaKnown RBP4.34□□□□□ -1.71
DDR48YMR173W YAP1801P38856 637 aa4.33□□□□□ -1.72
DDR48YMR173W ATF1P40353 525 aa4.33□□□□□ -1.72
DDR48YMR173W BUL1P48524 976 aa4.33□□□□□ -1.72
DDR48YMR173W EEB1Q02891 456 aa4.33□□□□□ -1.72
DDR48YMR173W ENB1Q08299 606 aa4.33□□□□□ -1.72
DDR48YMR173W TRP2P00899 507 aaKnown RBP4.32□□□□□ -1.72
DDR48YMR173W EFT1P32324 842 aaKnown RBP4.32□□□□□ -1.72
DDR48YMR173W PET112P33893 541 aa4.32□□□□□ -1.72
DDR48YMR173W QRI1P43123 477 aaKnown RBP4.32□□□□□ -1.72
DDR48YMR173W YGR012WP53206 393 aa4.32□□□□□ -1.72
DDR48YMR173W TMN2Q04562 672 aa4.32□□□□□ -1.72
DDR48YMR173W SPP382Q06411 708 aaPredicted RBP4.32□□□□□ -1.72
DDR48YMR173W CDA1Q06702 301 aa4.32□□□□□ -1.72
DDR48YMR173W YLR040CQ07988 224 aa4.32□□□□□ -1.72
DDR48YMR173W YOL073CQ08232 322 aa4.32□□□□□ -1.72
DDR48YMR173W NPC2Q12408 173 aa4.32□□□□□ -1.72
DDR48YMR173W RKM4Q12504 494 aa4.32□□□□□ -1.72
DDR48YMR173W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
DDR48YMR173W BDF2Q07442 638 aa4.31□□□□□ -1.72
DDR48YMR173W OSW2Q12202 724 aa4.31□□□□□ -1.72
DDR48YMR173W SPE1P08432 466 aa4.3□□□□□ -1.72
DDR48YMR173W NAP1P25293 417 aaKnown RBP4.3□□□□□ -1.72
DDR48YMR173W NCS6P53088 359 aa4.3□□□□□ -1.72
DDR48YMR173W YGR053CP53234 283 aa4.3□□□□□ -1.72
DDR48YMR173W SVF1Q05515 481 aa4.3□□□□□ -1.72
DDR48YMR173W KAR4P25583 335 aa4.29□□□□□ -1.72
DDR48YMR173W SUL1P38359 859 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms