RNA–Protein interactions for RNA: YKL165C

MCD4, Transcript of Protein involved in GPI anchor synthesis, yeast

Gene MCD4, Length 2,760 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCD4	YKL165C	IML2	P47031	731 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	YJR098C	P47139	656 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	MSN5	P52918	1224 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	PCL10	P53124	433 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	MNP1	P53163	194 aa	Predicted RBP	4.17	□□□□□ -1.74
MCD4	YKL165C	EFM5	P53200	248 aa	Known RBP	4.17	□□□□□ -1.74
MCD4	YKL165C	SDA1	P53313	767 aa	Known RBP	4.17	□□□□□ -1.74
MCD4	YKL165C	PEX29	Q03370	554 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	TAF8	Q03750	510 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	ESC2	Q06340	456 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	YOR352W	Q08816	343 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	PGA3	Q12746	312 aa	Known RBP	4.17	□□□□□ -1.74
MCD4	YKL165C	SMC6	Q12749	1114 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	SEC3	P33332	1336 aa	Known RBP	4.17	□□□□□ -1.74
MCD4	YKL165C	ITR1	P30605	584 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	TRZ1	P36159	838 aa	Predicted RBP	4.17	□□□□□ -1.74
MCD4	YKL165C	VRP1	P37370	817 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	RSP5	P39940	809 aa	Known RBP	4.17	□□□□□ -1.74
MCD4	YKL165C	YIR014W	P40570	242 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	SAP155	P43612	1002 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	ARH1	P48360	493 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	TOS4	Q06266	489 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	MCP2	Q06567	569 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	PHO4	P07270	312 aa	Known RBP	4.16	□□□□□ -1.74
MCD4	YKL165C	BUD14	P27637	709 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	HSP78	P33416	811 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	YKL069W	P36088	180 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	CCL1	P37366	393 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	KTR4	P38131	464 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	KIC1	P38692	1080 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	CHZ1	P40019	153 aa	Predicted RBP	4.16	□□□□□ -1.74
MCD4	YKL165C	GPP2	P40106	250 aa	Known RBP	4.16	□□□□□ -1.74
MCD4	YKL165C	NPY1	P53164	384 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	ARA2	Q04212	335 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	SMF3	Q12078	473 aa	Predicted RBP	4.16	□□□□□ -1.74
MCD4	YKL165C	LCB1	P25045	558 aa	Known RBP	4.16	□□□□□ -1.74
MCD4	YKL165C	CHS3	P29465	1165 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	TFC4	P33339	1025 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	DED81	P38707	554 aa	Known RBP	4.16	□□□□□ -1.74
MCD4	YKL165C	YHL041W	P38730	149 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	RIM4	P38741	713 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	ISM1	P48526	1002 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	RNR4	P49723	345 aa	Known RBP	4.16	□□□□□ -1.74
MCD4	YKL165C	NUP84	P52891	726 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	PTA1	Q01329	785 aa	Predicted RBP	4.16	□□□□□ -1.74
MCD4	YKL165C	RSM28	Q03430	361 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	RRP6	Q12149	733 aa	Known RBP	4.16	□□□□□ -1.74
MCD4	YKL165C	SCM3	Q12334	223 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	ADF1	Q2V2Q1	113 aa		4.16	□□□□□ -1.74
MCD4	YKL165C	RPC53	P25441	422 aa		4.15	□□□□□ -1.74
MCD4	YKL165C	NAM7	P30771	971 aa	Known RBP	4.15	□□□□□ -1.74
MCD4	YKL165C	DPH5	P32469	300 aa	Predicted RBP	4.15	□□□□□ -1.74
MCD4	YKL165C	MNR2	P35724	969 aa		4.15	□□□□□ -1.74
MCD4	YKL165C	TMN3	P40071	706 aa		4.15	□□□□□ -1.74
MCD4	YKL165C	AIP1	P46680	615 aa	Known RBP	4.15	□□□□□ -1.74
MCD4	YKL165C	HST1	P53685	503 aa		4.15	□□□□□ -1.74
MCD4	YKL165C	CIA1	Q05583	330 aa		4.15	□□□□□ -1.74
MCD4	YKL165C	ADY3	Q07732	790 aa		4.15	□□□□□ -1.74
MCD4	YKL165C	TAF3	Q12297	353 aa		4.15	□□□□□ -1.74
MCD4	YKL165C	YRM1	Q12340	786 aa		4.15	□□□□□ -1.74
MCD4	YKL165C	CFT1	Q06632	1357 aa	Known RBP	4.15	□□□□□ -1.75
MCD4	YKL165C	JIP3	O13555	125 aa		4.15	□□□□□ -1.75
MCD4	YKL165C	VMA2	P16140	517 aa	Known RBP	4.15	□□□□□ -1.75
MCD4	YKL165C	HSP104	P31539	908 aa	Known RBP	4.15	□□□□□ -1.75
MCD4	YKL165C	ORC2	P32833	620 aa		4.15	□□□□□ -1.75
MCD4	YKL165C	CSE4	P36012	229 aa		4.15	□□□□□ -1.75
MCD4	YKL165C	ECM4	P36156	370 aa		4.15	□□□□□ -1.75
MCD4	YKL165C	MAK5	P38112	773 aa	Predicted RBP	4.15	□□□□□ -1.75
MCD4	YKL165C	ALD5	P40047	520 aa	Known RBP	4.15	□□□□□ -1.75
MCD4	YKL165C	JEM1	P40358	645 aa		4.15	□□□□□ -1.75
MCD4	YKL165C	NAS2	P40555	220 aa		4.15	□□□□□ -1.75
MCD4	YKL165C	INA22	P40576	216 aa		4.15	□□□□□ -1.75
MCD4	YKL165C	TYW3	P53177	273 aa		4.15	□□□□□ -1.75
MCD4	YKL165C	YGR273C	P53329	174 aa		4.15	□□□□□ -1.75
MCD4	YKL165C	ALO1	P54783	526 aa	Known RBP	4.15	□□□□□ -1.75
MCD4	YKL165C	PSR2	Q07949	397 aa		4.15	□□□□□ -1.75
MCD4	YKL165C	FLC1	Q08967	793 aa		4.15	□□□□□ -1.75
MCD4	YKL165C	SSK22	P25390	1331 aa	Predicted RBP	4.15	□□□□□ -1.75
MCD4	YKL165C	SWI6	P09959	803 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	MET8	P15807	274 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	CLN2	P20438	545 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	RRP43	P25359	394 aa	Predicted RBP	4.14	□□□□□ -1.75
MCD4	YKL165C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
MCD4	YKL165C	MIA40	P36046	403 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	UBX7	P38349	436 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	XDJ1	P39102	459 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	SPF1	P39986	1215 aa	Known RBP	4.14	□□□□□ -1.75
MCD4	YKL165C	FTR1	P40088	404 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	ERR3	P42222	437 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	MAL11	P53048	616 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	PEX14	P53112	341 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	SSL2	Q00578	843 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	ADE13	Q05911	482 aa	Known RBP	4.14	□□□□□ -1.75
MCD4	YKL165C	NDL1	Q06568	189 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	KEL3	Q08979	651 aa	Predicted RBP	4.14	□□□□□ -1.75
MCD4	YKL165C	PRP9	P19736	530 aa	Known RBP	4.14	□□□□□ -1.75
MCD4	YKL165C	SAN1	P22470	610 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	KCC4	P25389	1037 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	ELM1	P32801	640 aa		4.14	□□□□□ -1.75
MCD4	YKL165C	RPT1	P33299	467 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms