RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C DUR3P33413 735 aa6.11□□□□□ -1.43
SCM3YDL139C JIP5Q06214 492 aaPredicted RBP6.11□□□□□ -1.43
SCM3YDL139C SLP1Q12232 587 aa6.11□□□□□ -1.43
SCM3YDL139C PGA3Q12746 312 aaKnown RBP6.11□□□□□ -1.43
SCM3YDL139C AI3P03877 415 aa6.1□□□□□ -1.43
SCM3YDL139C HXK1P04806 485 aaKnown RBP6.1□□□□□ -1.43
SCM3YDL139C NOT3P06102 836 aaKnown RBP6.1□□□□□ -1.43
SCM3YDL139C CDC16P09798 840 aa6.1□□□□□ -1.43
SCM3YDL139C PCT1P13259 424 aa6.1□□□□□ -1.43
SCM3YDL139C SER1P33330 395 aaKnown RBP6.1□□□□□ -1.43
SCM3YDL139C TFA2P36145 328 aa6.1□□□□□ -1.43
SCM3YDL139C FPR3P38911 411 aaKnown RBP6.1□□□□□ -1.43
SCM3YDL139C YNL193WP53870 558 aa6.1□□□□□ -1.43
SCM3YDL139C ALD3P54114 506 aa6.1□□□□□ -1.43
SCM3YDL139C DAL4Q04895 635 aa6.1□□□□□ -1.43
SCM3YDL139C RAD50P12753 1312 aa6.09□□□□□ -1.43
SCM3YDL139C CYC8P14922 966 aa6.09□□□□□ -1.43
SCM3YDL139C SAC7P17121 654 aa6.09□□□□□ -1.43
SCM3YDL139C GRX1P25373 110 aaKnown RBP6.09□□□□□ -1.43
SCM3YDL139C PRP40P33203 583 aaKnown RBP6.09□□□□□ -1.43
SCM3YDL139C ECM21P38167 1117 aaKnown RBP6.09□□□□□ -1.43
SCM3YDL139C YIR014WP40570 242 aa6.09□□□□□ -1.43
SCM3YDL139C NPA3P47122 385 aa6.09□□□□□ -1.43
SCM3YDL139C BIO5P53744 561 aaKnown RBP6.09□□□□□ -1.43
SCM3YDL139C DNM1P54861 757 aa6.09□□□□□ -1.43
SCM3YDL139C YCS4Q06156 1176 aa6.09□□□□□ -1.43
SCM3YDL139C PEP7P32609 515 aa6.08□□□□□ -1.44
SCM3YDL139C UGA4P32837 571 aa6.08□□□□□ -1.44
SCM3YDL139C MON1P53129 644 aa6.08□□□□□ -1.44
SCM3YDL139C SSP2Q08646 371 aa6.08□□□□□ -1.44
SCM3YDL139C FLO1P32768 1537 aa6.08□□□□□ -1.44
SCM3YDL139C FUS1P11710 512 aa6.07□□□□□ -1.44
SCM3YDL139C SEC18P18759 758 aaKnown RBP6.07□□□□□ -1.44
SCM3YDL139C SFA1P32771 386 aa6.07□□□□□ -1.44
SCM3YDL139C AAP1P37898 856 aaKnown RBP6.07□□□□□ -1.44
SCM3YDL139C PAN5P38787 379 aa6.07□□□□□ -1.44
SCM3YDL139C MSH6Q03834 1242 aa6.07□□□□□ -1.44
SCM3YDL139C LAM4P38800 1345 aa6.06□□□□□ -1.44
SCM3YDL139C MCM5P29496 775 aaKnown RBP6.06□□□□□ -1.44
SCM3YDL139C ECM2P38241 364 aaKnown RBP6.06□□□□□ -1.44
SCM3YDL139C SPL2P38839 148 aa6.06□□□□□ -1.44
SCM3YDL139C YGL242CP53066 181 aa6.06□□□□□ -1.44
SCM3YDL139C NUT1P53114 1132 aa6.06□□□□□ -1.44
SCM3YDL139C PKH1Q03407 766 aa6.06□□□□□ -1.44
SCM3YDL139C ESF1Q06344 628 aaKnown RBP6.06□□□□□ -1.44
SCM3YDL139C MAG2Q06436 670 aaKnown RBP6.06□□□□□ -1.44
SCM3YDL139C SOG2Q08817 791 aa6.06□□□□□ -1.44
SCM3YDL139C RIM20Q12033 661 aa6.06□□□□□ -1.44
SCM3YDL139C TOS1P38288 455 aa6.05□□□□□ -1.44
SCM3YDL139C YMR147WP40218 223 aaKnown RBP6.05□□□□□ -1.44
SCM3YDL139C NEO1P40527 1151 aa6.05□□□□□ -1.44
SCM3YDL139C YJR124CP47159 448 aa6.05□□□□□ -1.44
SCM3YDL139C ARI1P53111 347 aaKnown RBP6.05□□□□□ -1.44
SCM3YDL139C GUP1P53154 560 aa6.05□□□□□ -1.44
SCM3YDL139C NRD1P53617 575 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
SCM3YDL139C TY1A-NL1Q12391 440 aaKnown RBP6.05□□□□□ -1.44
SCM3YDL139C PDR18P53756 1333 aa6.04□□□□□ -1.44
SCM3YDL139C MBR1P23493 339 aa6.04□□□□□ -1.44
SCM3YDL139C RSC6P25632 483 aa6.04□□□□□ -1.44
SCM3YDL139C DSE4P53753 1117 aa6.04□□□□□ -1.44
SCM3YDL139C HDA1P53973 706 aa6.04□□□□□ -1.44
SCM3YDL139C YPL109CQ02981 657 aa6.04□□□□□ -1.44
SCM3YDL139C PRE9P23638 258 aaKnown RBP6.03□□□□□ -1.44
SCM3YDL139C RPT3P33298 428 aaKnown RBP6.03□□□□□ -1.44
SCM3YDL139C RIM11P38615 370 aa6.03□□□□□ -1.44
SCM3YDL139C YIR042CP40586 236 aa6.03□□□□□ -1.44
SCM3YDL139C YNR065CP53751 1116 aa6.03□□□□□ -1.44
SCM3YDL139C ULP1Q02724 621 aa6.03□□□□□ -1.44
SCM3YDL139C CMR1Q12510 522 aaKnown RBP6.03□□□□□ -1.44
SCM3YDL139C FLO11P08640 1367 aa6.03□□□□□ -1.44
SCM3YDL139C ADR1P07248 1323 aa6.02□□□□□ -1.45
SCM3YDL139C CHO2P05374 869 aaKnown RBP6.02□□□□□ -1.45
SCM3YDL139C MRPS18P42847 217 aa6.02□□□□□ -1.45
SCM3YDL139C YGL081WP53156 320 aa6.02□□□□□ -1.45
SCM3YDL139C RPT4P53549 437 aaKnown RBP6.02□□□□□ -1.45
SCM3YDL139C VPS16Q03308 798 aa6.02□□□□□ -1.45
SCM3YDL139C VPS20Q04272 221 aa6.02□□□□□ -1.45
SCM3YDL139C THI3Q07471 609 aa6.02□□□□□ -1.45
SCM3YDL139C GLO4Q12320 285 aa6.02□□□□□ -1.45
SCM3YDL139C MGM1P32266 881 aa6.01□□□□□ -1.45
SCM3YDL139C COQ2P32378 372 aa6.01□□□□□ -1.45
SCM3YDL139C PGM1P33401 570 aaKnown RBP6.01□□□□□ -1.45
SCM3YDL139C PET112P33893 541 aa6.01□□□□□ -1.45
SCM3YDL139C GRX7P38068 203 aa6.01□□□□□ -1.45
SCM3YDL139C RVS167P39743 482 aaKnown RBP6.01□□□□□ -1.45
SCM3YDL139C ADI1Q03677 179 aa6.01□□□□□ -1.45
SCM3YDL139C PMT7Q06644 662 aa6.01□□□□□ -1.45
SCM3YDL139C MCD1Q12158 566 aa6.01□□□□□ -1.45
SCM3YDL139C SAC3P46674 1301 aa6□□□□□ -1.45
SCM3YDL139C VAS1P07806 1104 aaKnown RBP6□□□□□ -1.45
SCM3YDL139C NPR1P22211 790 aa6□□□□□ -1.45
SCM3YDL139C NAM7P30771 971 aaKnown RBP6□□□□□ -1.45
SCM3YDL139C SMY1P32364 656 aaKnown RBP6□□□□□ -1.45
SCM3YDL139C AKR1P39010 764 aa6□□□□□ -1.45
SCM3YDL139C PIC2P40035 300 aa6□□□□□ -1.45
SCM3YDL139C MAD1P40957 749 aa6□□□□□ -1.45
SCM3YDL139C LEM3P42838 414 aa6□□□□□ -1.45
SCM3YDL139C EAF6P47128 113 aa6□□□□□ -1.45
SCM3YDL139C YAF9P53930 226 aa6□□□□□ -1.45
SCM3YDL139C ALD6P54115 500 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 160.7 ms