RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 CCDC146Q8IYE0 955 aa13.58□□□□□ -0.24
CASC19-247ENST00000641642 ZCRB1Q8TBF4 217 aaKnown RBP13.58□□□□□ -0.24
CASC19-247ENST00000641642 PHACTR3Q96KR7 559 aa13.58□□□□□ -0.24
CASC19-247ENST00000641642 USP35Q9P2H5 1018 aa13.58□□□□□ -0.24
CASC19-247ENST00000641642 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
CASC19-247ENST00000641642 PKD1L3Q7Z443 1732 aa13.58□□□□□ -0.24
CASC19-247ENST00000641642 MEGF6O75095 1541 aa13.58□□□□□ -0.24
CASC19-247ENST00000641642 WNK3Q9BYP7 1800 aa13.57□□□□□ -0.24
CASC19-247ENST00000641642 EXOC5O00471 708 aa13.57□□□□□ -0.24
CASC19-247ENST00000641642 PBX2P40425 430 aa13.57□□□□□ -0.24
CASC19-247ENST00000641642 AKAP4Q5JQC9 854 aa13.57□□□□□ -0.24
CASC19-247ENST00000641642 IFNL2Q8IZJ0 200 aa13.57□□□□□ -0.24
CASC19-247ENST00000641642 PCDH11XQ9BZA7 1347 aa13.57□□□□□ -0.24
CASC19-247ENST00000641642 PCDH11YQ9BZA8 1340 aa13.57□□□□□ -0.24
CASC19-247ENST00000641642 MTHFSDQ2M296 383 aaKnown RBP13.56□□□□□ -0.24
CASC19-247ENST00000641642 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
CASC19-247ENST00000641642 POTEEQ6S8J3 1075 aa13.56□□□□□ -0.24
CASC19-247ENST00000641642 GLI3P10071 1580 aa13.55□□□□□ -0.24
CASC19-247ENST00000641642 GNAT3A8MTJ3 354 aa13.55□□□□□ -0.24
CASC19-247ENST00000641642 RIPK4P57078 832 aa13.55□□□□□ -0.24
CASC19-247ENST00000641642 FOXK1P85037 733 aa13.55□□□□□ -0.24
CASC19-247ENST00000641642 CALD1Q05682 793 aaKnown RBP13.55□□□□□ -0.24
CASC19-247ENST00000641642 DDB1Q16531 1140 aa13.55□□□□□ -0.24
CASC19-247ENST00000641642 RTF1Q92541 710 aaKnown RBP13.55□□□□□ -0.24
CASC19-247ENST00000641642 TNS2Q63HR2 1409 aa13.55□□□□□ -0.24
CASC19-247ENST00000641642 HNRNPUQ00839 825 aaKnown RBP eCLIP13.54□□□□□ -0.24
CASC19-247ENST00000641642 NKX1-1Q15270 411 aaPredicted RBP13.54□□□□□ -0.24
CASC19-247ENST00000641642 ZNF530Q6P9A1 599 aaPredicted RBP13.54□□□□□ -0.24
CASC19-247ENST00000641642 PTCD2Q8WV60 388 aaKnown RBP13.54□□□□□ -0.24
CASC19-247ENST00000641642 ZBED9Q6R2W3 1325 aa13.54□□□□□ -0.24
CASC19-247ENST00000641642 THSD7AQ9UPZ6 1657 aa13.53□□□□□ -0.24
CASC19-247ENST00000641642 PHKG2P15735 406 aa13.53□□□□□ -0.24
CASC19-247ENST00000641642 RXRBP28702 533 aa13.53□□□□□ -0.24
CASC19-247ENST00000641642 PDE3BQ13370 1112 aa13.53□□□□□ -0.24
CASC19-247ENST00000641642 FAM98CQ17RN3 349 aaKnown RBP13.53□□□□□ -0.24
CASC19-247ENST00000641642 ANKRD13DQ6ZTN6 518 aa13.53□□□□□ -0.24
CASC19-247ENST00000641642 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
CASC19-247ENST00000641642 DCAF5Q96JK2 942 aa13.53□□□□□ -0.24
CASC19-247ENST00000641642 MAP3K5Q99683 1374 aa13.53□□□□□ -0.24
CASC19-247ENST00000641642 DLG5Q8TDM6 1919 aa13.52□□□□□ -0.24
CASC19-247ENST00000641642 WWC1Q8IX03 1113 aa13.52□□□□□ -0.25
CASC19-247ENST00000641642 GPHNQ9NQX3 736 aaPredicted RBP13.52□□□□□ -0.25
CASC19-247ENST00000641642 RGS17Q9UGC6 210 aaPredicted RBP13.52□□□□□ -0.25
CASC19-247ENST00000641642 BCL9O00512 1426 aa13.51□□□□□ -0.25
CASC19-247ENST00000641642 IL16Q14005 1332 aa13.51□□□□□ -0.25
CASC19-247ENST00000641642 CYP27B1O15528 508 aa13.51□□□□□ -0.25
CASC19-247ENST00000641642 BABAM1Q9NWV8 329 aa13.51□□□□□ -0.25
CASC19-247ENST00000641642 CEMIPQ8WUJ3 1361 aa13.5□□□□□ -0.25
CASC19-247ENST00000641642 ZNF521Q96K83 1311 aa13.5□□□□□ -0.25
CASC19-247ENST00000641642 NEUROD2Q15784 382 aa13.5□□□□□ -0.25
CASC19-247ENST00000641642 SHANK3Q9BYB0 1731 aa13.5□□□□□ -0.25
CASC19-247ENST00000641642 ADAMTS7Q9UKP4 1686 aa13.5□□□□□ -0.25
CASC19-247ENST00000641642 LRRC37A3O60309 1634 aa13.5□□□□□ -0.25
CASC19-247ENST00000641642 ERVV-2B6SEH9 535 aa13.49□□□□□ -0.25
CASC19-247ENST00000641642 SEPT12Q8IYM1 358 aa13.49□□□□□ -0.25
CASC19-247ENST00000641642 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
CASC19-247ENST00000641642 RNMTO43148 476 aaKnown RBP13.48□□□□□ -0.25
CASC19-247ENST00000641642 DDX54Q8TDD1 881 aaKnown RBP13.48□□□□□ -0.25
CASC19-247ENST00000641642 SCN11AQ9UI33 1791 aa13.48□□□□□ -0.25
CASC19-247ENST00000641642 A0A0G2JS52 829 aa13.47□□□□□ -0.25
CASC19-247ENST00000641642 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
CASC19-247ENST00000641642 MYT1Q01538 1121 aa13.47□□□□□ -0.25
CASC19-247ENST00000641642 POTEAQ6S8J7 498 aa13.47□□□□□ -0.25
CASC19-247ENST00000641642 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
CASC19-247ENST00000641642 IL17REQ8NFR9 667 aa13.47□□□□□ -0.25
CASC19-247ENST00000641642 E9PSI1 815 aa13.46□□□□□ -0.25
CASC19-247ENST00000641642 GNAI1P63096 354 aa13.46□□□□□ -0.25
CASC19-247ENST00000641642 TEFQ10587 303 aa13.46□□□□□ -0.25
CASC19-247ENST00000641642 MARCH10Q8NA82 808 aaPredicted RBP13.46□□□□□ -0.25
CASC19-247ENST00000641642 CFAP44Q96MT7 982 aa13.46□□□□□ -0.25
CASC19-247ENST00000641642 IFT57Q9NWB7 429 aa13.46□□□□□ -0.25
CASC19-247ENST00000641642 VIRMAQ69YN4 1812 aaKnown RBP13.46□□□□□ -0.26
CASC19-247ENST00000641642 MRC1P22897 1456 aa13.45□□□□□ -0.26
CASC19-247ENST00000641642 DSG2Q14126 1118 aa13.45□□□□□ -0.26
CASC19-247ENST00000641642 TAF7Q15545 349 aaPredicted RBP13.45□□□□□ -0.26
CASC19-247ENST00000641642 MPRIPQ6WCQ1 1025 aa13.45□□□□□ -0.26
CASC19-247ENST00000641642 KRT27Q7Z3Y8 459 aa13.45□□□□□ -0.26
CASC19-247ENST00000641642 MYH16Q9H6N6 1097 aa13.45□□□□□ -0.26
CASC19-247ENST00000641642 ZNF853P0CG23 659 aa13.44□□□□□ -0.26
CASC19-247ENST00000641642 FAM196AQ6ZSG2 479 aa13.44□□□□□ -0.26
CASC19-247ENST00000641642 MCM10Q7L590 875 aa13.44□□□□□ -0.26
CASC19-247ENST00000641642 SLC52A2Q9HAB3 445 aa13.44□□□□□ -0.26
CASC19-247ENST00000641642 LGR6Q9HBX8 967 aa13.44□□□□□ -0.26
CASC19-247ENST00000641642 SALL2Q9Y467 1007 aaPredicted RBP13.44□□□□□ -0.26
CASC19-247ENST00000641642 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
CASC19-247ENST00000641642 CHL1O00533 1208 aa13.43□□□□□ -0.26
CASC19-247ENST00000641642 CABP4P57796 275 aa13.43□□□□□ -0.26
CASC19-247ENST00000641642 YTHDC1Q96MU7 727 aaKnown RBP13.43□□□□□ -0.26
CASC19-247ENST00000641642 SLFN5Q08AF3 891 aa13.42□□□□□ -0.26
CASC19-247ENST00000641642 DCTN1Q14203 1278 aa13.42□□□□□ -0.26
CASC19-247ENST00000641642 TRMT2AQ8IZ69 625 aaKnown RBP13.42□□□□□ -0.26
CASC19-247ENST00000641642 KAT6BQ8WYB5 2073 aa13.42□□□□□ -0.26
CASC19-247ENST00000641642 SIPA1L3O60292 1781 aaPredicted RBP13.41□□□□□ -0.26
CASC19-247ENST00000641642 CHMP4AQ9BY43 222 aa13.41□□□□□ -0.26
CASC19-247ENST00000641642 TMOD3Q9NYL9 352 aa13.41□□□□□ -0.26
CASC19-247ENST00000641642 BRWD3Q6RI45 1802 aa13.41□□□□□ -0.26
CASC19-247ENST00000641642 SOS1Q07889 1333 aaPredicted RBP13.4□□□□□ -0.26
CASC19-247ENST00000641642 RGS12O14924 1447 aa13.4□□□□□ -0.26
CASC19-247ENST00000641642 BTBD11A6QL63 1104 aa13.4□□□□□ -0.26
CASC19-247ENST00000641642 ARHGAP33O14559 1287 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms