RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 DGKGP49619 791 aa8.95□□□□□ -0.98
AP3S1-209ENST00000640413 CD163Q86VB7 1156 aa8.95□□□□□ -0.98
AP3S1-209ENST00000640413 SIRT1Q96EB6 747 aa8.95□□□□□ -0.98
AP3S1-209ENST00000640413 NIFKQ9BYG3 293 aaKnown RBP8.95□□□□□ -0.98
AP3S1-209ENST00000640413 SERTAD1Q9UHV2 236 aa8.95□□□□□ -0.98
AP3S1-209ENST00000640413 KLF15Q9UIH9 416 aa8.95□□□□□ -0.98
AP3S1-209ENST00000640413 A0A1W2PNR3 127 aa8.94□□□□□ -0.98
AP3S1-209ENST00000640413 MAPTP10636 758 aaKnown RBP8.94□□□□□ -0.98
AP3S1-209ENST00000640413 CD33P20138 364 aa8.94□□□□□ -0.98
AP3S1-209ENST00000640413 SMTNP53814 917 aa8.94□□□□□ -0.98
AP3S1-209ENST00000640413 CHSY3Q70JA7 882 aa8.94□□□□□ -0.98
AP3S1-209ENST00000640413 NLRP8Q86W28 1048 aa8.94□□□□□ -0.98
AP3S1-209ENST00000640413 PIK3R2O00459 728 aa8.93□□□□□ -0.98
AP3S1-209ENST00000640413 CHRNA4P43681 627 aa8.93□□□□□ -0.98
AP3S1-209ENST00000640413 TNP2Q05952 138 aa8.93□□□□□ -0.98
AP3S1-209ENST00000640413 ARSJQ5FYB0 599 aaPredicted RBP8.93□□□□□ -0.98
AP3S1-209ENST00000640413 Q8N3U1 123 aa8.93□□□□□ -0.98
AP3S1-209ENST00000640413 C1orf216Q8TAB5 229 aa8.93□□□□□ -0.98
AP3S1-209ENST00000640413 PRM3Q9NNZ6 103 aa8.93□□□□□ -0.98
AP3S1-209ENST00000640413 KHNYNO15037 678 aaKnown RBP8.92□□□□□ -0.98
AP3S1-209ENST00000640413 USP3Q9Y6I4 520 aa8.92□□□□□ -0.98
AP3S1-209ENST00000640413 ADH6P28332 368 aa8.91□□□□□ -0.98
AP3S1-209ENST00000640413 FCHSD1Q86WN1 690 aa8.91□□□□□ -0.98
AP3S1-209ENST00000640413 PLPP7Q8NBV4 271 aa8.91□□□□□ -0.98
AP3S1-209ENST00000640413 TMEM229AB2RXF0 380 aa8.9□□□□□ -0.98
AP3S1-209ENST00000640413 PCBP4P57723 403 aaKnown RBP8.9□□□□□ -0.98
AP3S1-209ENST00000640413 ZNF295-AS1Q8N0V1 137 aa8.9□□□□□ -0.98
AP3S1-209ENST00000640413 GDPD2Q9HCC8 539 aa8.9□□□□□ -0.98
AP3S1-209ENST00000640413 NOP53Q9NZM5 478 aaKnown RBP8.9□□□□□ -0.98
AP3S1-209ENST00000640413 ABL2P42684 1182 aa8.89□□□□□ -0.99
AP3S1-209ENST00000640413 NBPF1Q3BBV0 1214 aa8.89□□□□□ -0.99
AP3S1-209ENST00000640413 MAP7D1Q3KQU3 841 aa8.89□□□□□ -0.99
AP3S1-209ENST00000640413 FAM182BQ5T319 152 aa8.89□□□□□ -0.99
AP3S1-209ENST00000640413 ZIC5Q96T25 663 aa8.89□□□□□ -0.99
AP3S1-209ENST00000640413 PARP3Q9Y6F1 533 aa8.89□□□□□ -0.99
AP3S1-209ENST00000640413 CDK2AP1O14519 115 aa8.88□□□□□ -0.99
AP3S1-209ENST00000640413 DOC2BQ14184 412 aa8.88□□□□□ -0.99
AP3S1-209ENST00000640413 CABP1Q9NZU7 370 aa8.88□□□□□ -0.99
AP3S1-209ENST00000640413 IQSEC3Q9UPP2 1182 aaPredicted RBP8.88□□□□□ -0.99
AP3S1-209ENST00000640413 A6NJY4 79 aa8.87□□□□□ -0.99
AP3S1-209ENST00000640413 TATP17735 454 aaPredicted RBP8.87□□□□□ -0.99
AP3S1-209ENST00000640413 ITGB7P26010 798 aa8.87□□□□□ -0.99
AP3S1-209ENST00000640413 MTFR1Q15390 333 aa8.87□□□□□ -0.99
AP3S1-209ENST00000640413 TRIM11Q96F44 468 aa8.87□□□□□ -0.99
AP3S1-209ENST00000640413 SLC4A9Q96Q91 983 aa8.87□□□□□ -0.99
AP3S1-209ENST00000640413 STRN4Q9NRL3 753 aa8.87□□□□□ -0.99
AP3S1-209ENST00000640413 PRR12Q9ULL5 1215 aa8.87□□□□□ -0.99
AP3S1-209ENST00000640413 GJA3Q9Y6H8 435 aa8.87□□□□□ -0.99
AP3S1-209ENST00000640413 PLVAPQ9BX97 442 aa8.86□□□□□ -0.99
AP3S1-209ENST00000640413 SEMA6BQ9H3T3 888 aa8.86□□□□□ -0.99
AP3S1-209ENST00000640413 AVENQ9NQS1 362 aaPredicted RBP8.86□□□□□ -0.99
AP3S1-209ENST00000640413 FAM157BP0CG42 384 aa8.85□□□□□ -0.99
AP3S1-209ENST00000640413 SEMA3FQ13275 785 aa8.85□□□□□ -0.99
AP3S1-209ENST00000640413 ZNF468Q5VIY5 522 aaPredicted RBP8.85□□□□□ -0.99
AP3S1-209ENST00000640413 BICDL1Q6ZP65 573 aa8.85□□□□□ -0.99
AP3S1-209ENST00000640413 ZDHHC3Q9NYG2 299 aa8.85□□□□□ -0.99
AP3S1-209ENST00000640413 PCDHGA11Q9Y5H2 935 aa8.85□□□□□ -0.99
AP3S1-209ENST00000640413 PIK3CDO00329 1044 aa8.84□□□□□ -0.99
AP3S1-209ENST00000640413 TXLNAP40222 546 aa8.84□□□□□ -0.99
AP3S1-209ENST00000640413 MARK1Q9P0L2 795 aa8.84□□□□□ -0.99
AP3S1-209ENST00000640413 WASHC4Q2M389 1173 aa8.83□□□□□ -1
AP3S1-209ENST00000640413 EFSO43281 561 aa8.81□□□□□ -1
AP3S1-209ENST00000640413 GATA4P43694 442 aa8.81□□□□□ -1
AP3S1-209ENST00000640413 SAMD5Q5TGI4 173 aa8.81□□□□□ -1
AP3S1-209ENST00000640413 ZDHHC1Q8WTX9 485 aa8.81□□□□□ -1
AP3S1-209ENST00000640413 SPATA31C1P0DKV0 1188 aa8.8□□□□□ -1
AP3S1-209ENST00000640413 LRRC69Q6ZNQ3 347 aa8.8□□□□□ -1
AP3S1-209ENST00000640413 SYT9Q86SS6 491 aa8.8□□□□□ -1
AP3S1-209ENST00000640413 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.8□□□□□ -1
AP3S1-209ENST00000640413 KRTAP4-8Q9BYQ9 185 aa8.8□□□□□ -1
AP3S1-209ENST00000640413 ELOA3CA0A087WX78 387 aaPredicted RBP8.79□□□□□ -1
AP3S1-209ENST00000640413 ELOA3DA6NLF2 546 aaPredicted RBP8.79□□□□□ -1
AP3S1-209ENST00000640413 LAMC2Q13753 1193 aa8.79□□□□□ -1
AP3S1-209ENST00000640413 ELOA3BQ3SY89 546 aa8.79□□□□□ -1
AP3S1-209ENST00000640413 ELOA3Q8NG57 546 aa8.79□□□□□ -1
AP3S1-209ENST00000640413 L3MBTL2Q969R5 705 aa8.79□□□□□ -1
AP3S1-209ENST00000640413 SCHIP1Q9P0W5 487 aaPredicted RBP8.79□□□□□ -1
AP3S1-209ENST00000640413 BACH1O14867 736 aa8.78□□□□□ -1
AP3S1-209ENST00000640413 SKIP12755 728 aa8.78□□□□□ -1
AP3S1-209ENST00000640413 ALAS2P22557 587 aa8.78□□□□□ -1
AP3S1-209ENST00000640413 SOX11P35716 441 aa8.78□□□□□ -1
AP3S1-209ENST00000640413 EML3Q32P44 896 aa8.78□□□□□ -1
AP3S1-209ENST00000640413 TBCELQ5QJ74 424 aa8.78□□□□□ -1
AP3S1-209ENST00000640413 ZNF358Q9NW07 568 aa8.78□□□□□ -1
AP3S1-209ENST00000640413 GTF2IP78347 998 aa8.77□□□□□ -1.01
AP3S1-209ENST00000640413 PSME1Q06323 249 aa8.77□□□□□ -1.01
AP3S1-209ENST00000640413 NOD1Q9Y239 953 aa8.77□□□□□ -1.01
AP3S1-209ENST00000640413 FAM229AH3BQW9 127 aa8.76□□□□□ -1.01
AP3S1-209ENST00000640413 NOS2P35228 1153 aa8.76□□□□□ -1.01
AP3S1-209ENST00000640413 SFSWAPQ12872 951 aaKnown RBP8.76□□□□□ -1.01
AP3S1-209ENST00000640413 TEAD4Q15561 434 aa8.76□□□□□ -1.01
AP3S1-209ENST00000640413 ZMYM1Q5SVZ6 1142 aa8.76□□□□□ -1.01
AP3S1-209ENST00000640413 SLC30A3Q99726 388 aa8.76□□□□□ -1.01
AP3S1-209ENST00000640413 MDFIQ99750 246 aa8.76□□□□□ -1.01
AP3S1-209ENST00000640413 EML1O00423 815 aa8.75□□□□□ -1.01
AP3S1-209ENST00000640413 RSPO4Q2I0M5 234 aaPredicted RBP8.75□□□□□ -1.01
AP3S1-209ENST00000640413 SH3PXD2AQ5TCZ1 1133 aa8.75□□□□□ -1.01
AP3S1-209ENST00000640413 C8orf86Q6ZUL3 223 aa8.75□□□□□ -1.01
AP3S1-209ENST00000640413 SLC9A9Q8IVB4 645 aa8.75□□□□□ -1.01
AP3S1-209ENST00000640413 TNS4Q8IZW8 715 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms