RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 PPARGC1BQ86YN6 1023 aaKnown RBP10.97□□□□□ -0.65
RFC1-217ENST00000639695 RHBDD1Q8TEB9 315 aa10.97□□□□□ -0.65
RFC1-217ENST00000639695 DNAAF2Q9NVR5 837 aaKnown RBP10.97□□□□□ -0.65
RFC1-217ENST00000639695 GGA1Q9UJY5 639 aa10.97□□□□□ -0.65
RFC1-217ENST00000639695 MKL2Q9ULH7 1088 aa10.97□□□□□ -0.65
RFC1-217ENST00000639695 POM121CA8CG34 1229 aa10.96□□□□□ -0.65
RFC1-217ENST00000639695 CSB-PGBD3P0DP91 1061 aa10.96□□□□□ -0.65
RFC1-217ENST00000639695 BMP4P12644 408 aa10.96□□□□□ -0.65
RFC1-217ENST00000639695 FGFR3P22607 806 aa10.96□□□□□ -0.65
RFC1-217ENST00000639695 LBRQ14739 615 aaKnown RBP10.96□□□□□ -0.65
RFC1-217ENST00000639695 TLR1Q15399 786 aa10.96□□□□□ -0.65
RFC1-217ENST00000639695 ESCO1Q5FWF5 840 aa10.96□□□□□ -0.65
RFC1-217ENST00000639695 PGBD3Q8N328 593 aa10.96□□□□□ -0.65
RFC1-217ENST00000639695 GDF2Q9UK05 429 aaPredicted RBP10.96□□□□□ -0.65
RFC1-217ENST00000639695 PATL2C9JE40 543 aaKnown RBP10.95□□□□□ -0.66
RFC1-217ENST00000639695 BAG6P46379 1132 aa10.95□□□□□ -0.66
RFC1-217ENST00000639695 SCNN1DP51172 638 aa10.95□□□□□ -0.66
RFC1-217ENST00000639695 OXLD1Q5BKU9 147 aa10.95□□□□□ -0.66
RFC1-217ENST00000639695 GOLGA6L1Q8N7Z2 621 aa10.95□□□□□ -0.66
RFC1-217ENST00000639695 CHIC2Q9UKJ5 165 aa10.95□□□□□ -0.66
RFC1-217ENST00000639695 GTF2E1P29083 439 aaPredicted RBP10.94□□□□□ -0.66
RFC1-217ENST00000639695 PLA2G4AP47712 749 aa10.94□□□□□ -0.66
RFC1-217ENST00000639695 EFHC2Q5JST6 749 aa10.94□□□□□ -0.66
RFC1-217ENST00000639695 HDGFL1Q5TGJ6 251 aa10.94□□□□□ -0.66
RFC1-217ENST00000639695 SLCO4C1Q6ZQN7 724 aa10.94□□□□□ -0.66
RFC1-217ENST00000639695 CRISPLD1Q9H336 500 aa10.94□□□□□ -0.66
RFC1-217ENST00000639695 ATP4AP20648 1035 aa10.93□□□□□ -0.66
RFC1-217ENST00000639695 USP4Q13107 963 aa10.92□□□□□ -0.66
RFC1-217ENST00000639695 TMCO4Q5TGY1 634 aa10.92□□□□□ -0.66
RFC1-217ENST00000639695 RNF135Q8IUD6 432 aa10.92□□□□□ -0.66
RFC1-217ENST00000639695 PBXIP1Q96AQ6 731 aa10.92□□□□□ -0.66
RFC1-217ENST00000639695 K7ELQ4 463 aaPredicted RBP10.91□□□□□ -0.66
RFC1-217ENST00000639695 VAC14Q08AM6 782 aa10.91□□□□□ -0.66
RFC1-217ENST00000639695 GRIN2CQ14957 1233 aa10.91□□□□□ -0.66
RFC1-217ENST00000639695 SLFNL1Q499Z3 407 aa10.91□□□□□ -0.66
RFC1-217ENST00000639695 ZCCHC2Q9C0B9 1178 aaKnown RBP10.91□□□□□ -0.66
RFC1-217ENST00000639695 FURINP09958 794 aa10.9□□□□□ -0.66
RFC1-217ENST00000639695 EPXP11678 715 aa10.9□□□□□ -0.66
RFC1-217ENST00000639695 AMPD1P23109 780 aa10.9□□□□□ -0.66
RFC1-217ENST00000639695 GDF10P55107 478 aa10.9□□□□□ -0.66
RFC1-217ENST00000639695 EIF4G2P78344 907 aaKnown RBP eCLIP10.9□□□□□ -0.66
RFC1-217ENST00000639695 BTBD6Q96KE9 485 aa10.9□□□□□ -0.66
RFC1-217ENST00000639695 GZF1Q9H116 711 aaPredicted RBP10.9□□□□□ -0.66
RFC1-217ENST00000639695 NEURL1BA8MQ27 555 aa10.89□□□□□ -0.67
RFC1-217ENST00000639695 INHAP05111 366 aa10.89□□□□□ -0.67
RFC1-217ENST00000639695 TBC1D9Q6ZT07 1266 aa10.89□□□□□ -0.67
RFC1-217ENST00000639695 ZNF295-AS1Q8N0V1 137 aa10.89□□□□□ -0.67
RFC1-217ENST00000639695 KLF15Q9UIH9 416 aa10.89□□□□□ -0.67
RFC1-217ENST00000639695 USP3Q9Y6I4 520 aa10.89□□□□□ -0.67
RFC1-217ENST00000639695 DGKGP49619 791 aa10.87□□□□□ -0.67
RFC1-217ENST00000639695 PCDHGC4Q9Y5F7 938 aa10.87□□□□□ -0.67
RFC1-217ENST00000639695 ARAFP10398 606 aa10.86□□□□□ -0.67
RFC1-217ENST00000639695 RFX1P22670 979 aa10.86□□□□□ -0.67
RFC1-217ENST00000639695 SERTAD1Q9UHV2 236 aa10.86□□□□□ -0.67
RFC1-217ENST00000639695 DCDC2BA2VCK2 349 aa10.85□□□□□ -0.67
RFC1-217ENST00000639695 C1QTNF9BB2RNN3 333 aa10.85□□□□□ -0.67
RFC1-217ENST00000639695 CD33P20138 364 aa10.85□□□□□ -0.67
RFC1-217ENST00000639695 SMTNP53814 917 aa10.85□□□□□ -0.67
RFC1-217ENST00000639695 AIDAQ96BJ3 306 aa10.85□□□□□ -0.67
RFC1-217ENST00000639695 USTQ9Y2C2 406 aa10.85□□□□□ -0.67
RFC1-217ENST00000639695 TMEM229AB2RXF0 380 aa10.84□□□□□ -0.67
RFC1-217ENST00000639695 GNB5O14775 395 aa10.84□□□□□ -0.67
RFC1-217ENST00000639695 ATXN7O15265 892 aaPredicted RBP10.84□□□□□ -0.67
RFC1-217ENST00000639695 TNP2Q05952 138 aa10.84□□□□□ -0.67
RFC1-217ENST00000639695 ALYREFQ86V81 257 aaKnown RBP10.84□□□□□ -0.67
RFC1-217ENST00000639695 CD163Q86VB7 1156 aa10.84□□□□□ -0.67
RFC1-217ENST00000639695 A0A1W2PNR3 127 aa10.83□□□□□ -0.68
RFC1-217ENST00000639695 BRD1O95696 1058 aa10.83□□□□□ -0.68
RFC1-217ENST00000639695 MAPTP10636 758 aaKnown RBP10.83□□□□□ -0.68
RFC1-217ENST00000639695 CHRNA4P43681 627 aa10.83□□□□□ -0.68
RFC1-217ENST00000639695 FIGNL1Q6PIW4 674 aa10.83□□□□□ -0.68
RFC1-217ENST00000639695 NLRP8Q86W28 1048 aa10.83□□□□□ -0.68
RFC1-217ENST00000639695 FCHSD1Q86WN1 690 aa10.83□□□□□ -0.68
RFC1-217ENST00000639695 PLPP7Q8NBV4 271 aa10.83□□□□□ -0.68
RFC1-217ENST00000639695 NIFKQ9BYG3 293 aaKnown RBP10.83□□□□□ -0.68
RFC1-217ENST00000639695 PPP1R12CQ9BZL4 782 aa10.83□□□□□ -0.68
RFC1-217ENST00000639695 IQSEC3Q9UPP2 1182 aaPredicted RBP10.83□□□□□ -0.68
RFC1-217ENST00000639695 SOX11P35716 441 aa10.82□□□□□ -0.68
RFC1-217ENST00000639695 KCNA1Q09470 495 aa10.82□□□□□ -0.68
RFC1-217ENST00000639695 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.81□□□□□ -0.68
RFC1-217ENST00000639695 ITGB7P26010 798 aa10.81□□□□□ -0.68
RFC1-217ENST00000639695 CHSY3Q70JA7 882 aa10.81□□□□□ -0.68
RFC1-217ENST00000639695 C1orf216Q8TAB5 229 aa10.81□□□□□ -0.68
RFC1-217ENST00000639695 ADAMTS19Q8TE59 1207 aa10.81□□□□□ -0.68
RFC1-217ENST00000639695 SIRT1Q96EB6 747 aa10.81□□□□□ -0.68
RFC1-217ENST00000639695 PIK3CDO00329 1044 aa10.8□□□□□ -0.68
RFC1-217ENST00000639695 MFAP1P55081 439 aaKnown RBP10.8□□□□□ -0.68
RFC1-217ENST00000639695 CFAP70Q5T0N1 1121 aa10.8□□□□□ -0.68
RFC1-217ENST00000639695 ZIC5Q96T25 663 aa10.8□□□□□ -0.68
RFC1-217ENST00000639695 ALG2Q9H553 416 aa10.8□□□□□ -0.68
RFC1-217ENST00000639695 STRN4Q9NRL3 753 aa10.8□□□□□ -0.68
RFC1-217ENST00000639695 KHNYNO15037 678 aaKnown RBP10.79□□□□□ -0.68
RFC1-217ENST00000639695 ARSJQ5FYB0 599 aaPredicted RBP10.79□□□□□ -0.68
RFC1-217ENST00000639695 SLC4A9Q96Q91 983 aa10.79□□□□□ -0.68
RFC1-217ENST00000639695 PARP3Q9Y6F1 533 aa10.79□□□□□ -0.68
RFC1-217ENST00000639695 PALM3A6NDB9 673 aaPredicted RBP10.78□□□□□ -0.68
RFC1-217ENST00000639695 LMOD1P29536 600 aaPredicted RBP10.78□□□□□ -0.68
RFC1-217ENST00000639695 PCBP4P57723 403 aaKnown RBP10.78□□□□□ -0.68
RFC1-217ENST00000639695 SEMA3FQ13275 785 aa10.78□□□□□ -0.68
RFC1-217ENST00000639695 MTFR1Q15390 333 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms