RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 JRKLQ9Y4A0 524 aa6.73□□□□□ -1.33
POLR2B-213ENST00000639658 PREX1Q8TCU6 1659 aa6.73□□□□□ -1.33
POLR2B-213ENST00000639658 TTC21BQ7Z4L5 1316 aa6.72□□□□□ -1.33
POLR2B-213ENST00000639658 ATXN2Q99700 1313 aaKnown RBP6.72□□□□□ -1.33
POLR2B-213ENST00000639658 TRIM27P14373 513 aa6.72□□□□□ -1.33
POLR2B-213ENST00000639658 CDK12Q9NYV4 1490 aaPredicted RBP6.72□□□□□ -1.33
POLR2B-213ENST00000639658 TDRD7Q8NHU6 1098 aaKnown RBP6.72□□□□□ -1.33
POLR2B-213ENST00000639658 RNF217Q8TC41 542 aa6.72□□□□□ -1.33
POLR2B-213ENST00000639658 MSH6P52701 1360 aa6.72□□□□□ -1.33
POLR2B-213ENST00000639658 AP5Z1O43299 807 aa6.71□□□□□ -1.33
POLR2B-213ENST00000639658 SLU7O95391 586 aaKnown RBP6.71□□□□□ -1.33
POLR2B-213ENST00000639658 PNMA6AP0CW24 399 aaPredicted RBP6.71□□□□□ -1.33
POLR2B-213ENST00000639658 TNNT3P45378 269 aaPredicted RBP6.71□□□□□ -1.33
POLR2B-213ENST00000639658 GPS2Q13227 327 aa6.71□□□□□ -1.33
POLR2B-213ENST00000639658 PKP1Q13835 747 aa6.71□□□□□ -1.33
POLR2B-213ENST00000639658 OSBPL3Q9H4L5 887 aa6.71□□□□□ -1.33
POLR2B-213ENST00000639658 CXorf56Q9H5V9 222 aa6.71□□□□□ -1.33
POLR2B-213ENST00000639658 TET3O43151 1660 aa6.71□□□□□ -1.33
POLR2B-213ENST00000639658 LIG1P18858 919 aa6.71□□□□□ -1.34
POLR2B-213ENST00000639658 SYT10Q6XYQ8 523 aa6.71□□□□□ -1.34
POLR2B-213ENST00000639658 SGSM3Q96HU1 749 aa6.71□□□□□ -1.34
POLR2B-213ENST00000639658 SRRTQ9BXP5 876 aaKnown RBP6.71□□□□□ -1.34
POLR2B-213ENST00000639658 MYH15Q9Y2K3 1946 aa6.71□□□□□ -1.34
POLR2B-213ENST00000639658 SYCP2Q9BX26 1530 aa6.71□□□□□ -1.34
POLR2B-213ENST00000639658 WDR33Q9C0J8 1336 aaKnown RBP6.71□□□□□ -1.34
POLR2B-213ENST00000639658 TNNT1P13805 278 aa6.71□□□□□ -1.34
POLR2B-213ENST00000639658 SEMA3FQ13275 785 aa6.71□□□□□ -1.34
POLR2B-213ENST00000639658 INTS3Q68E01 1043 aaKnown RBP6.71□□□□□ -1.34
POLR2B-213ENST00000639658 MCTP2Q6DN12 878 aa6.71□□□□□ -1.34
POLR2B-213ENST00000639658 TDRD9Q8NDG6 1382 aaKnown RBP6.71□□□□□ -1.34
POLR2B-213ENST00000639658 ABCC4O15439 1325 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 CEP135Q66GS9 1140 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 ZSCAN25Q6NSZ9 544 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 REXO1L1PQ8IX06 675 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 FAM200AQ8TCP9 573 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 PPM1EQ8WY54 764 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 ZSCAN16Q9H4T2 348 aaPredicted RBP6.7□□□□□ -1.34
POLR2B-213ENST00000639658 MKRN1Q9UHC7 482 aaKnown RBP6.7□□□□□ -1.34
POLR2B-213ENST00000639658 LRRC7Q96NW7 1537 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 SENP3-EIF4A1A0A087X0R7 540 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 IPO8O15397 1037 aaKnown RBP6.7□□□□□ -1.34
POLR2B-213ENST00000639658 IGSF3O75054 1194 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 CORO7P57737 925 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 TTC22Q5TAA0 569 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 ANKRD23Q86SG2 305 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 TEX13AQ9BXU3 409 aaPredicted RBP6.7□□□□□ -1.34
POLR2B-213ENST00000639658 TCHHQ07283 1943 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 CD109Q6YHK3 1445 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 CLTCQ00610 1675 aaKnown RBP6.7□□□□□ -1.34
POLR2B-213ENST00000639658 GSPT1P15170 499 aaKnown RBP6.7□□□□□ -1.34
POLR2B-213ENST00000639658 MTA1Q13330 715 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 ZSCAN26Q16670 478 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 MRFAP1L1Q96HT8 127 aa6.7□□□□□ -1.34
POLR2B-213ENST00000639658 RBM42Q9BTD8 480 aaKnown RBP6.7□□□□□ -1.34
POLR2B-213ENST00000639658 RRP15Q9Y3B9 282 aaKnown RBP6.7□□□□□ -1.34
POLR2B-213ENST00000639658 ZBTB7BO15156 539 aaPredicted RBP6.69□□□□□ -1.34
POLR2B-213ENST00000639658 CTAGE5O15320 804 aa6.69□□□□□ -1.34
POLR2B-213ENST00000639658 ACTN2P35609 894 aa6.69□□□□□ -1.34
POLR2B-213ENST00000639658 SF3B2Q13435 895 aaKnown RBP6.69□□□□□ -1.34
POLR2B-213ENST00000639658 TMEM132AQ24JP5 1023 aa6.69□□□□□ -1.34
POLR2B-213ENST00000639658 MMS22LQ6ZRQ5 1243 aa6.69□□□□□ -1.34
POLR2B-213ENST00000639658 SUFUQ9UMX1 484 aa6.69□□□□□ -1.34
POLR2B-213ENST00000639658 PLCH2O75038 1416 aa6.69□□□□□ -1.34
POLR2B-213ENST00000639658 PSDA5PKW4 1024 aaPredicted RBP6.69□□□□□ -1.34
POLR2B-213ENST00000639658 ERCC3P19447 782 aa6.69□□□□□ -1.34
POLR2B-213ENST00000639658 TTC31Q49AM3 519 aaPredicted RBP6.69□□□□□ -1.34
POLR2B-213ENST00000639658 EFCAB13Q8IY85 973 aa6.69□□□□□ -1.34
POLR2B-213ENST00000639658 GPATCH11Q8N954 259 aa6.69□□□□□ -1.34
POLR2B-213ENST00000639658 FAM107BQ9H098 131 aa6.69□□□□□ -1.34
POLR2B-213ENST00000639658 TNNQ9UQP3 1299 aa6.69□□□□□ -1.34
POLR2B-213ENST00000639658 PHLPP2Q6ZVD8 1323 aa6.69□□□□□ -1.34
POLR2B-213ENST00000639658 TDO2P48775 406 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 CCDC158Q5M9N0 1113 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 FILIP1Q7Z7B0 1213 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 C17orf53Q8N3J3 647 aaPredicted RBP6.68□□□□□ -1.34
POLR2B-213ENST00000639658 BORCS6Q96GS4 357 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 ZNF215Q9UL58 517 aaPredicted RBP6.68□□□□□ -1.34
POLR2B-213ENST00000639658 ATP10DQ9P241 1426 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 COQ9O75208 318 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 ATP6V1AP38606 617 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 DDR1Q08345 913 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 USP48Q86UV5 1035 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 PACS2Q86VP3 889 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 PLEKHM2Q8IWE5 1019 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 ZGPATQ8N5A5 531 aaKnown RBP6.68□□□□□ -1.34
POLR2B-213ENST00000639658 HNRNPLLQ8WVV9 542 aaKnown RBP6.68□□□□□ -1.34
POLR2B-213ENST00000639658 AK7Q96M32 723 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 ATP1B4Q9UN42 357 aaPredicted RBP6.68□□□□□ -1.34
POLR2B-213ENST00000639658 ZNF644Q9H582 1327 aaPredicted RBP6.68□□□□□ -1.34
POLR2B-213ENST00000639658 KDRP35968 1356 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 FAM177BA6PVY3 158 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 MAP2K7O14733 419 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 CLCN6P51797 869 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 ZNF75DP51815 510 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 KRBA2Q6ZNG9 492 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 CHMP4CQ96CF2 233 aa6.68□□□□□ -1.34
POLR2B-213ENST00000639658 TMCO5BA8MYB1 307 aa6.67□□□□□ -1.34
POLR2B-213ENST00000639658 TRHP20396 242 aaPredicted RBP6.67□□□□□ -1.34
POLR2B-213ENST00000639658 TUBB4BP68371 445 aa6.67□□□□□ -1.34
POLR2B-213ENST00000639658 RNF214Q8ND24 703 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms