RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 SEPT3Q9UH03 358 aa11.08□□□□□ -0.64
FAM49B-230ENST00000639004 PTCD1O75127 700 aaKnown RBP11.07□□□□□ -0.64
FAM49B-230ENST00000639004 SERPINB4P48594 390 aa11.07□□□□□ -0.64
FAM49B-230ENST00000639004 CABP1Q9NZU7 370 aa11.07□□□□□ -0.64
FAM49B-230ENST00000639004 EML1O00423 815 aa11.06□□□□□ -0.64
FAM49B-230ENST00000639004 ST8SIA5O15466 376 aa11.06□□□□□ -0.64
FAM49B-230ENST00000639004 GTF2E1P29083 439 aaPredicted RBP11.06□□□□□ -0.64
FAM49B-230ENST00000639004 SH3PXD2AQ5TCZ1 1133 aa11.06□□□□□ -0.64
FAM49B-230ENST00000639004 VTI1AQ96AJ9 217 aa11.06□□□□□ -0.64
FAM49B-230ENST00000639004 NIFKQ9BYG3 293 aaKnown RBP11.06□□□□□ -0.64
FAM49B-230ENST00000639004 AAASQ9NRG9 546 aa11.06□□□□□ -0.64
FAM49B-230ENST00000639004 MTMR7Q9Y216 660 aa11.06□□□□□ -0.64
FAM49B-230ENST00000639004 SERTM1A2A2V5 107 aa11.05□□□□□ -0.64
FAM49B-230ENST00000639004 SPATA31C2B4DYI2 1134 aa11.05□□□□□ -0.64
FAM49B-230ENST00000639004 NOS2P35228 1153 aa11.05□□□□□ -0.64
FAM49B-230ENST00000639004 GNASQ5JWF2 1037 aa11.05□□□□□ -0.64
FAM49B-230ENST00000639004 ZFP42Q96MM3 310 aa11.05□□□□□ -0.64
FAM49B-230ENST00000639004 CHMP3Q9Y3E7 222 aa11.05□□□□□ -0.64
FAM49B-230ENST00000639004 SOS2Q07890 1332 aaPredicted RBP11.05□□□□□ -0.64
FAM49B-230ENST00000639004 TTLL8A6PVC2 850 aa11.04□□□□□ -0.64
FAM49B-230ENST00000639004 HIRAP54198 1017 aaPredicted RBP11.04□□□□□ -0.64
FAM49B-230ENST00000639004 C4orf17Q53FE4 359 aa11.04□□□□□ -0.64
FAM49B-230ENST00000639004 L3MBTL2Q969R5 705 aa11.04□□□□□ -0.64
FAM49B-230ENST00000639004 PARP3Q9Y6F1 533 aa11.04□□□□□ -0.64
FAM49B-230ENST00000639004 NAA30Q147X3 362 aaPredicted RBP11.03□□□□□ -0.64
FAM49B-230ENST00000639004 ZNF232Q9UNY5 417 aa11.03□□□□□ -0.64
FAM49B-230ENST00000639004 PLA2G4AP47712 749 aa11.02□□□□□ -0.65
FAM49B-230ENST00000639004 LYSMD3Q7Z3D4 306 aa11.02□□□□□ -0.65
FAM49B-230ENST00000639004 PRICKLE2Q7Z3G6 844 aa11.02□□□□□ -0.65
FAM49B-230ENST00000639004 GTF3C2Q8WUA4 911 aaPredicted RBP11.02□□□□□ -0.65
FAM49B-230ENST00000639004 ATP13A2Q9NQ11 1180 aa11.02□□□□□ -0.65
FAM49B-230ENST00000639004 DACH1Q9UI36 760 aa11.02□□□□□ -0.65
FAM49B-230ENST00000639004 FIGNL2A6NMB9 653 aa11.01□□□□□ -0.65
FAM49B-230ENST00000639004 ABL1P00519 1130 aa11.01□□□□□ -0.65
FAM49B-230ENST00000639004 POU4F2Q12837 409 aa11.01□□□□□ -0.65
FAM49B-230ENST00000639004 ZNF211Q13398 564 aaPredicted RBP11.01□□□□□ -0.65
FAM49B-230ENST00000639004 NBPF10Q6P3W6 841 aaKnown RBP11.01□□□□□ -0.65
FAM49B-230ENST00000639004 QTRT2Q9H974 415 aaKnown RBP11.01□□□□□ -0.65
FAM49B-230ENST00000639004 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.01□□□□□ -0.653e-10■■■■■ 130.4
FAM49B-230ENST00000639004 EGFL7Q9UHF1 273 aa11.01□□□□□ -0.65
FAM49B-230ENST00000639004 DNMT3AQ9Y6K1 912 aaPredicted RBP11.01□□□□□ -0.65
FAM49B-230ENST00000639004 SOWAHDA6NJG2 315 aa11□□□□□ -0.65
FAM49B-230ENST00000639004 PHKA2P46019 1235 aa11□□□□□ -0.65
FAM49B-230ENST00000639004 SND1Q7KZF4 910 aaKnown RBP eCLIP11□□□□□ -0.65
FAM49B-230ENST00000639004 SAP130Q9H0E3 1048 aa11□□□□□ -0.65
FAM49B-230ENST00000639004 HCN4Q9Y3Q4 1203 aa11□□□□□ -0.65
FAM49B-230ENST00000639004 TXLNAP40222 546 aa10.99□□□□□ -0.65
FAM49B-230ENST00000639004 C16orf46Q6P387 395 aa10.99□□□□□ -0.65
FAM49B-230ENST00000639004 ALDH16A1Q8IZ83 802 aa10.99□□□□□ -0.65
FAM49B-230ENST00000639004 NGLY1Q96IV0 654 aa10.99□□□□□ -0.65
FAM49B-230ENST00000639004 ANO2Q9NQ90 1003 aa10.99□□□□□ -0.65
FAM49B-230ENST00000639004 DNMT3LQ9UJW3 386 aa10.99□□□□□ -0.65
FAM49B-230ENST00000639004 RHOQP17081 205 aa10.98□□□□□ -0.65
FAM49B-230ENST00000639004 WDR44Q5JSH3 913 aa10.98□□□□□ -0.65
FAM49B-230ENST00000639004 HELQQ8TDG4 1101 aa10.98□□□□□ -0.65
FAM49B-230ENST00000639004 MYO19Q96H55 970 aa10.98□□□□□ -0.65
FAM49B-230ENST00000639004 PHACTR1Q9C0D0 580 aa10.98□□□□□ -0.65
FAM49B-230ENST00000639004 ICMTO60725 284 aa10.97□□□□□ -0.65
FAM49B-230ENST00000639004 MTMR3Q13615 1198 aa10.97□□□□□ -0.65
FAM49B-230ENST00000639004 COX20Q5RI15 118 aa10.97□□□□□ -0.65
FAM49B-230ENST00000639004 TMCO4Q5TGY1 634 aa10.97□□□□□ -0.65
FAM49B-230ENST00000639004 H3BRB1 525 aa10.96□□□□□ -0.65
FAM49B-230ENST00000639004 C1orf53Q5VUE5 145 aa10.96□□□□□ -0.65
FAM49B-230ENST00000639004 TUT1Q9H6E5 874 aaKnown RBP10.96□□□□□ -0.65
FAM49B-230ENST00000639004 LRFN2Q9ULH4 789 aa10.96□□□□□ -0.65
FAM49B-230ENST00000639004 TNFRSF10BO14763 440 aa10.95□□□□□ -0.66
FAM49B-230ENST00000639004 FKBP4Q02790 459 aaKnown RBP eCLIP10.95□□□□□ -0.66
FAM49B-230ENST00000639004 SF3B2Q13435 895 aaKnown RBP10.95□□□□□ -0.66
FAM49B-230ENST00000639004 RTN1Q16799 776 aa10.95□□□□□ -0.66
FAM49B-230ENST00000639004 NBPF1Q3BBV0 1214 aa10.95□□□□□ -0.66
FAM49B-230ENST00000639004 AIDAQ96BJ3 306 aa10.95□□□□□ -0.66
FAM49B-230ENST00000639004 ZDHHC3Q9NYG2 299 aa10.95□□□□□ -0.66
FAM49B-230ENST00000639004 TIMMDC1Q9NPL8 285 aa10.94□□□□□ -0.66
FAM49B-230ENST00000639004 MAN1A2O60476 641 aa10.93□□□□□ -0.66
FAM49B-230ENST00000639004 ATP4AP20648 1035 aa10.93□□□□□ -0.66
FAM49B-230ENST00000639004 ECM1Q16610 540 aa10.93□□□□□ -0.66
FAM49B-230ENST00000639004 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.93□□□□□ -0.66
FAM49B-230ENST00000639004 GLYCTKQ8IVS8 523 aa10.93□□□□□ -0.66
FAM49B-230ENST00000639004 C7orf43Q8WVR3 580 aa10.93□□□□□ -0.66
FAM49B-230ENST00000639004 SOBPA7XYQ1 873 aa10.92□□□□□ -0.66
FAM49B-230ENST00000639004 A0A1B0GTH6 734 aa10.91□□□□□ -0.66
FAM49B-230ENST00000639004 NPR3P17342 541 aa10.91□□□□□ -0.66
FAM49B-230ENST00000639004 TATP17735 454 aaPredicted RBP10.91□□□□□ -0.66
FAM49B-230ENST00000639004 DGKZQ13574 1117 aa10.91□□□□□ -0.66
FAM49B-230ENST00000639004 RHPN1Q8TCX5 695 aa10.91□□□□□ -0.66
FAM49B-230ENST00000639004 KLK14Q9P0G3 267 aa10.91□□□□□ -0.66
FAM49B-230ENST00000639004 LCE2BO14633 110 aa10.9□□□□□ -0.66
FAM49B-230ENST00000639004 MPSTP25325 297 aa10.9□□□□□ -0.66
FAM49B-230ENST00000639004 MSX1P28360 303 aa10.9□□□□□ -0.66
FAM49B-230ENST00000639004 C11orf91Q3C1V1 193 aa10.9□□□□□ -0.66
FAM49B-230ENST00000639004 FAM26DQ5JW98 314 aa10.9□□□□□ -0.66
FAM49B-230ENST00000639004 KLRG1Q96E93 195 aa10.9□□□□□ -0.66
FAM49B-230ENST00000639004 SENP2Q9HC62 589 aa10.9□□□□□ -0.66
FAM49B-230ENST00000639004 STIM2Q9P246 746 aa10.9□□□□□ -0.66
FAM49B-230ENST00000639004 BIN2Q9UBW5 565 aaPredicted RBP10.9□□□□□ -0.66
FAM49B-230ENST00000639004 CCDC9Q9Y3X0 531 aaKnown RBP10.9□□□□□ -0.66
FAM49B-230ENST00000639004 SENP3-EIF4A1A0A087X0R7 540 aa10.89□□□□□ -0.67
FAM49B-230ENST00000639004 MFAP1P55081 439 aaKnown RBP10.89□□□□□ -0.67
FAM49B-230ENST00000639004 Q6ZNB5 142 aa10.89□□□□□ -0.67
FAM49B-230ENST00000639004 KIFC2Q96AC6 838 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms