RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 CADPS2Q86UW7 1296 aa22.75■■□□□ 1.23
CTSD-212ENST00000637815 C5P01031 1676 aa22.75■■□□□ 1.23
CTSD-212ENST00000637815 ERC2O15083 957 aa22.75■■□□□ 1.23
CTSD-212ENST00000637815 RAB11FIP3O75154 756 aa22.75■■□□□ 1.23
CTSD-212ENST00000637815 PPP1R42Q7Z4L9 355 aa22.75■■□□□ 1.23
CTSD-212ENST00000637815 ANXA1P04083 346 aa22.74■■□□□ 1.23
CTSD-212ENST00000637815 NBPF7P0C2Y1 421 aaPredicted RBP22.74■■□□□ 1.23
CTSD-212ENST00000637815 RAPGEF4Q8WZA2 1011 aa22.74■■□□□ 1.23
CTSD-212ENST00000637815 DDX17Q92841 729 aaKnown RBP22.74■■□□□ 1.23
CTSD-212ENST00000637815 KDM6AO15550 1401 aaPredicted RBP22.74■■□□□ 1.23
CTSD-212ENST00000637815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.74■■□□□ 1.23
CTSD-212ENST00000637815 MEGF6O75095 1541 aa22.73■■□□□ 1.23
CTSD-212ENST00000637815 TSHZ3Q63HK5 1081 aa22.72■■□□□ 1.23
CTSD-212ENST00000637815 NLRP2Q9NX02 1062 aa22.72■■□□□ 1.23
CTSD-212ENST00000637815 MRC1P22897 1456 aa22.71■■□□□ 1.23
CTSD-212ENST00000637815 ALDH1L1O75891 902 aa22.71■■□□□ 1.23
CTSD-212ENST00000637815 PROSER3Q2NL68 480 aa22.71■■□□□ 1.23
CTSD-212ENST00000637815 KSR2Q6VAB6 950 aa22.71■■□□□ 1.23
CTSD-212ENST00000637815 HYPKQ9NX55 129 aa22.71■■□□□ 1.23
CTSD-212ENST00000637815 TATP17735 454 aaPredicted RBP22.7■■□□□ 1.23
CTSD-212ENST00000637815 SRGAP3O43295 1099 aa22.7■■□□□ 1.22
CTSD-212ENST00000637815 MTX1Q13505 466 aa22.7■■□□□ 1.22
CTSD-212ENST00000637815 SPG7Q9UQ90 795 aa22.7■■□□□ 1.22
CTSD-212ENST00000637815 MAP3K2Q9Y2U5 619 aa22.7■■□□□ 1.22
CTSD-212ENST00000637815 SPATA31A3Q5VYP0 1347 aa22.7■■□□□ 1.22
CTSD-212ENST00000637815 CPDO75976 1380 aa22.69■■□□□ 1.22
CTSD-212ENST00000637815 PRAMEF22A3QJZ6 481 aa22.69■■□□□ 1.22
CTSD-212ENST00000637815 SURF6O75683 361 aaKnown RBP22.69■■□□□ 1.22
CTSD-212ENST00000637815 PHKG2P15735 406 aa22.69■■□□□ 1.22
CTSD-212ENST00000637815 SLC52A2Q9HAB3 445 aa22.69■■□□□ 1.22
CTSD-212ENST00000637815 RAB3GAP1Q15042 981 aa22.69■■□□□ 1.22
CTSD-212ENST00000637815 DDX21Q9NR30 783 aaKnown RBP eCLIP22.69■■□□□ 1.22
CTSD-212ENST00000637815 HSP90AA1P07900 732 aaKnown RBP22.68■■□□□ 1.22
CTSD-212ENST00000637815 ZNF790Q6PG37 636 aa22.68■■□□□ 1.22
CTSD-212ENST00000637815 RHPN1Q8TCX5 695 aa22.68■■□□□ 1.22
CTSD-212ENST00000637815 KIF1BPQ96EK5 621 aa22.68■■□□□ 1.22
CTSD-212ENST00000637815 ESYT1Q9BSJ8 1104 aa22.68■■□□□ 1.22
CTSD-212ENST00000637815 PARP4Q9UKK3 1724 aaKnown RBP22.68■■□□□ 1.22
CTSD-212ENST00000637815 IL1RAPL2Q9NP60 686 aa22.67■■□□□ 1.22
CTSD-212ENST00000637815 HSP90AB4PQ58FF6 505 aa22.67■■□□□ 1.22
CTSD-212ENST00000637815 DDX11L8A8MPP1 907 aa22.66■■□□□ 1.22
CTSD-212ENST00000637815 CHMLP26374 656 aa22.66■■□□□ 1.22
CTSD-212ENST00000637815 PDIA6Q15084 440 aa22.66■■□□□ 1.22
CTSD-212ENST00000637815 CABLES1Q8TDN4 633 aa22.66■■□□□ 1.22
CTSD-212ENST00000637815 IFNL2Q8IZJ0 200 aa22.65■■□□□ 1.22
CTSD-212ENST00000637815 TNPO1Q92973 898 aaKnown RBP22.65■■□□□ 1.22
CTSD-212ENST00000637815 HDAC5Q9UQL6 1122 aa22.65■■□□□ 1.22
CTSD-212ENST00000637815 UTYO14607 1347 aa22.64■■□□□ 1.21
CTSD-212ENST00000637815 TRIM6-TRIM34B2RNG4 842 aa22.64■■□□□ 1.21
CTSD-212ENST00000637815 ST18O60284 1047 aa22.64■■□□□ 1.21
CTSD-212ENST00000637815 DDX58O95786 925 aaKnown RBP22.64■■□□□ 1.21
CTSD-212ENST00000637815 LINS1Q8NG48 757 aa22.64■■□□□ 1.21
CTSD-212ENST00000637815 CSB-PGBD3P0DP91 1061 aa22.63■■□□□ 1.21
CTSD-212ENST00000637815 PI4K2BQ8TCG2 481 aa22.63■■□□□ 1.21
CTSD-212ENST00000637815 RILPL2Q969X0 211 aa22.63■■□□□ 1.21
CTSD-212ENST00000637815 C9orf78Q9NZ63 289 aaPredicted RBP22.63■■□□□ 1.21
CTSD-212ENST00000637815 USP42Q9H9J4 1324 aaKnown RBP22.62■■□□□ 1.21
CTSD-212ENST00000637815 SLC39A6Q13433 755 aa22.62■■□□□ 1.21
CTSD-212ENST00000637815 CHRNA2Q15822 529 aa22.62■■□□□ 1.21
CTSD-212ENST00000637815 NUTM1Q86Y26 1132 aa22.62■■□□□ 1.21
CTSD-212ENST00000637815 UNC5CLQ8IV45 518 aa22.62■■□□□ 1.21
CTSD-212ENST00000637815 NFATC2IPQ8NCF5 419 aa22.62■■□□□ 1.21
CTSD-212ENST00000637815 STRCQ7RTU9 1775 aa22.62■■□□□ 1.21
CTSD-212ENST00000637815 LAMB4A4D0S4 1761 aa22.62■■□□□ 1.21
CTSD-212ENST00000637815 HSPA2P54652 639 aa22.62■■□□□ 1.21
CTSD-212ENST00000637815 DCAF5Q96JK2 942 aa22.62■■□□□ 1.21
CTSD-212ENST00000637815 CWF19L2Q2TBE0 894 aaKnown RBP22.61■■□□□ 1.21
CTSD-212ENST00000637815 GBP4Q96PP9 640 aa22.61■■□□□ 1.21
CTSD-212ENST00000637815 FOXD4L1Q9NU39 408 aa22.61■■□□□ 1.21
CTSD-212ENST00000637815 CYP27B1O15528 508 aa22.6■■□□□ 1.21
CTSD-212ENST00000637815 EPB41L2O43491 1005 aaKnown RBP22.6■■□□□ 1.21
CTSD-212ENST00000637815 IL17RAQ96F46 866 aa22.6■■□□□ 1.21
CTSD-212ENST00000637815 GLI3P10071 1580 aa22.6■■□□□ 1.21
CTSD-212ENST00000637815 TRAK2O60296 914 aa22.6■■□□□ 1.21
CTSD-212ENST00000637815 GRM8O00222 908 aa22.59■■□□□ 1.21
CTSD-212ENST00000637815 ANAPC15P60006 121 aa22.59■■□□□ 1.21
CTSD-212ENST00000637815 BRINP3Q76B58 766 aa22.59■■□□□ 1.21
CTSD-212ENST00000637815 CLEC17AQ6ZS10 378 aa22.58■■□□□ 1.21
CTSD-212ENST00000637815 MCCP23508 829 aa22.58■■□□□ 1.2
CTSD-212ENST00000637815 ZNF496Q96IT1 587 aaPredicted RBP22.58■■□□□ 1.2
CTSD-212ENST00000637815 ABCA3Q99758 1704 aa22.58■■□□□ 1.2
CTSD-212ENST00000637815 TTC41PQ6P2S7 1318 aa22.57■■□□□ 1.2
CTSD-212ENST00000637815 AFDNP55196 1824 aaKnown RBP22.57■■□□□ 1.2
CTSD-212ENST00000637815 LARP1Q6PKG0 1096 aaKnown RBP22.57■■□□□ 1.2
CTSD-212ENST00000637815 ERC1Q8IUD2 1116 aa22.57■■□□□ 1.2
CTSD-212ENST00000637815 ARFGEF2Q9Y6D5 1785 aa22.56■■□□□ 1.2
CTSD-212ENST00000637815 AIMP1Q12904 312 aaKnown RBP22.56■■□□□ 1.2
CTSD-212ENST00000637815 KAZALD1Q96I82 304 aa22.56■■□□□ 1.2
CTSD-212ENST00000637815 ANO2Q9NQ90 1003 aa22.56■■□□□ 1.2
CTSD-212ENST00000637815 IGKV5-2P06315 115 aa22.55■■□□□ 1.2
CTSD-212ENST00000637815 SNRPA1P09661 255 aaKnown RBP22.55■■□□□ 1.2
CTSD-212ENST00000637815 PTMSP20962 102 aa22.55■■□□□ 1.2
CTSD-212ENST00000637815 LRP10Q7Z4F1 713 aa22.55■■□□□ 1.2
CTSD-212ENST00000637815 SUCLG2Q96I99 432 aa22.55■■□□□ 1.2
CTSD-212ENST00000637815 OS9Q13438 667 aaPredicted RBP22.55■■□□□ 1.2
CTSD-212ENST00000637815 RIC3Q7Z5B4 369 aa22.55■■□□□ 1.2
CTSD-212ENST00000637815 CWC22Q9HCG8 908 aaKnown RBP22.55■■□□□ 1.2
CTSD-212ENST00000637815 UBR2Q8IWV8 1755 aa22.55■■□□□ 1.2
CTSD-212ENST00000637815 TTC5Q8N0Z6 440 aa22.54■■□□□ 1.2
CTSD-212ENST00000637815 CNTROBQ8N137 903 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms