RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 WWC3Q9ULE0 1092 aa6.73□□□□□ -1.33
CHD2-227ENST00000637572 GNL3LQ9NVN8 582 aaKnown RBP6.72□□□□□ -1.33
CHD2-227ENST00000637572 NAP1L2Q9ULW6 460 aaPredicted RBP6.72□□□□□ -1.33
CHD2-227ENST00000637572 MADDQ8WXG6 1647 aa6.72□□□□□ -1.33
CHD2-227ENST00000637572 CCDC57Q2TAC2 916 aa6.72□□□□□ -1.33
CHD2-227ENST00000637572 CNTROBQ8N137 903 aa6.72□□□□□ -1.33
CHD2-227ENST00000637572 DNAAF4Q8WXU2 420 aa6.72□□□□□ -1.33
CHD2-227ENST00000637572 MBIPQ9NS73 344 aa6.72□□□□□ -1.33
CHD2-227ENST00000637572 RAB11FIP3O75154 756 aa6.72□□□□□ -1.33
CHD2-227ENST00000637572 DCTN1Q14203 1278 aa6.72□□□□□ -1.33
CHD2-227ENST00000637572 MYL6BP14649 208 aa6.72□□□□□ -1.33
CHD2-227ENST00000637572 PDE4AP27815 886 aa6.72□□□□□ -1.33
CHD2-227ENST00000637572 THUMPD2Q9BTF0 503 aaKnown RBP6.72□□□□□ -1.33
CHD2-227ENST00000637572 LRRCC1Q9C099 1032 aa6.72□□□□□ -1.33
CHD2-227ENST00000637572 CREBZFQ9NS37 354 aa6.72□□□□□ -1.33
CHD2-227ENST00000637572 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.72□□□□□ -1.331e-8■■■□□ 17.9
CHD2-227ENST00000637572 DEPDC5O75140 1603 aa6.72□□□□□ -1.33
CHD2-227ENST00000637572 CDC45O75419 566 aa6.71□□□□□ -1.33
CHD2-227ENST00000637572 DPYSL4O14531 572 aa6.71□□□□□ -1.34
CHD2-227ENST00000637572 FLIIQ13045 1269 aa6.71□□□□□ -1.34
CHD2-227ENST00000637572 MTHFSDQ2M296 383 aaKnown RBP6.71□□□□□ -1.34
CHD2-227ENST00000637572 GBP4Q96PP9 640 aa6.71□□□□□ -1.34
CHD2-227ENST00000637572 TBC1D2BQ9UPU7 963 aa6.71□□□□□ -1.34
CHD2-227ENST00000637572 NCOA3Q9Y6Q9 1424 aa6.71□□□□□ -1.34
CHD2-227ENST00000637572 GOLGA6L4A6NEF3 574 aa6.71□□□□□ -1.34
CHD2-227ENST00000637572 ZPR1O75312 459 aa6.71□□□□□ -1.34
CHD2-227ENST00000637572 CCDC158Q5M9N0 1113 aa6.71□□□□□ -1.34
CHD2-227ENST00000637572 LNPKQ9C0E8 428 aa6.71□□□□□ -1.34
CHD2-227ENST00000637572 PTCD1O75127 700 aaKnown RBP6.7□□□□□ -1.34
CHD2-227ENST00000637572 CSPP1Q1MSJ5 1256 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 CPLX2Q6PUV4 134 aaKnown RBP6.7□□□□□ -1.34
CHD2-227ENST00000637572 RBM19Q9Y4C8 960 aaKnown RBP6.7□□□□□ -1.34
CHD2-227ENST00000637572 JCADQ9P266 1359 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 ALDH1L1O75891 902 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 NEUROD6Q96NK8 337 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 MPHOSPH8Q99549 860 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 CNNM1Q9NRU3 951 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 BTG4Q9NY30 223 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 DIP2AQ14689 1571 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 KIAA1210Q9ULL0 1709 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 NRXN1Q9ULB1 1477 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 NEXMIFQ5QGS0 1516 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 TULP4Q9NRJ4 1543 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 APBA3O96018 575 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 RBM25P49756 843 aaKnown RBP6.7□□□□□ -1.34
CHD2-227ENST00000637572 ZSCAN25Q6NSZ9 544 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 BARGINQ6ZT62 677 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 TMEM57Q8N5G2 664 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 CCDC97Q96F63 343 aaPredicted RBP6.7□□□□□ -1.34
CHD2-227ENST00000637572 CCDC34Q96HJ3 373 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 CEP126Q9P2H0 1117 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 AKAP2Q9Y2D5 859 aa6.7□□□□□ -1.34
CHD2-227ENST00000637572 SRGAP3O43295 1099 aa6.69□□□□□ -1.34
CHD2-227ENST00000637572 TRDNQ13061 729 aa6.69□□□□□ -1.34
CHD2-227ENST00000637572 CABLES1Q8TDN4 633 aa6.69□□□□□ -1.34
CHD2-227ENST00000637572 FRMPD1Q5SYB0 1578 aa6.69□□□□□ -1.34
CHD2-227ENST00000637572 RNMTO43148 476 aaKnown RBP6.69□□□□□ -1.34
CHD2-227ENST00000637572 IGHMBP2P38935 993 aaKnown RBP6.69□□□□□ -1.34
CHD2-227ENST00000637572 GNL2Q13823 731 aaKnown RBP6.69□□□□□ -1.34
CHD2-227ENST00000637572 SYNE3Q6ZMZ3 975 aa6.69□□□□□ -1.34
CHD2-227ENST00000637572 KIF1BPQ96EK5 621 aa6.69□□□□□ -1.34
CHD2-227ENST00000637572 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.69□□□□□ -1.348e-8■■□□□ 11.4
CHD2-227ENST00000637572 MIS18AQ9NYP9 233 aa6.69□□□□□ -1.34
CHD2-227ENST00000637572 BLMP54132 1417 aaPredicted RBP6.69□□□□□ -1.34
CHD2-227ENST00000637572 MED14O60244 1454 aa6.69□□□□□ -1.34
CHD2-227ENST00000637572 TECPR2O15040 1411 aa6.68□□□□□ -1.34
CHD2-227ENST00000637572 FBLN1P23142 703 aa6.68□□□□□ -1.34
CHD2-227ENST00000637572 ARHGEF25Q86VW2 580 aa6.68□□□□□ -1.34
CHD2-227ENST00000637572 PREX1Q8TCU6 1659 aa6.68□□□□□ -1.34
CHD2-227ENST00000637572 PRR36Q9H6K5 1346 aa6.68□□□□□ -1.34
CHD2-227ENST00000637572 PPP1R42Q7Z4L9 355 aa6.68□□□□□ -1.34
CHD2-227ENST00000637572 PDZRN3Q9UPQ7 1066 aa6.68□□□□□ -1.34
CHD2-227ENST00000637572 TRIM66O15016 1216 aa6.68□□□□□ -1.34
CHD2-227ENST00000637572 TRIM27P14373 513 aa6.68□□□□□ -1.34
CHD2-227ENST00000637572 CHD1LQ86WJ1 897 aa6.68□□□□□ -1.34
CHD2-227ENST00000637572 IPO9Q96P70 1041 aaKnown RBP6.68□□□□□ -1.34
CHD2-227ENST00000637572 ATP6V1DQ9Y5K8 247 aa6.68□□□□□ -1.34
CHD2-227ENST00000637572 CDK12Q9NYV4 1490 aaPredicted RBP6.68□□□□□ -1.34
CHD2-227ENST00000637572 RICTORQ6R327 1708 aa6.68□□□□□ -1.34
CHD2-227ENST00000637572 FAM83GA6ND36 823 aa6.68□□□□□ -1.34
CHD2-227ENST00000637572 ERVV-2B6SEH9 535 aa6.68□□□□□ -1.34
CHD2-227ENST00000637572 CWC25Q9NXE8 425 aaPredicted RBP6.68□□□□□ -1.34
CHD2-227ENST00000637572 PSMA5P28066 241 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 POLD1P28340 1107 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 ANKRD13DQ6ZTN6 518 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 CEP170BQ9Y4F5 1589 aaPredicted RBP6.67□□□□□ -1.34
CHD2-227ENST00000637572 SETD1BQ9UPS6 1966 aaKnown RBP6.67□□□□□ -1.34
CHD2-227ENST00000637572 USP31Q70CQ4 1352 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 KIAA0232Q92628 1395 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 PIK3C2BO00750 1634 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 GIGYF1O75420 1035 aaPredicted RBP6.67□□□□□ -1.34
CHD2-227ENST00000637572 MCM2P49736 904 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 KSR2Q6VAB6 950 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 FSD1Q9BTV5 496 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 CDC42BPGQ6DT37 1551 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 CHL1O00533 1208 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 PHACTR3Q96KR7 559 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 MYD88Q99836 296 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 CARD10Q9BWT7 1032 aa6.67□□□□□ -1.34
CHD2-227ENST00000637572 TRIM34Q9BYJ4 488 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms