RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 TSHZ3Q63HK5 1081 aa17.67■□□□□ 0.42
CLN6-215ENST00000636674 LRRFIP2Q9Y608 721 aaKnown RBP17.67■□□□□ 0.42
CLN6-215ENST00000636674 RAB11FIP3O75154 756 aa17.67■□□□□ 0.42
CLN6-215ENST00000636674 TERF1P54274 439 aa17.67■□□□□ 0.42
CLN6-215ENST00000636674 USP44Q9H0E7 712 aa17.67■□□□□ 0.42
CLN6-215ENST00000636674 ANO2Q9NQ90 1003 aa17.67■□□□□ 0.42
CLN6-215ENST00000636674 RBM27Q9P2N5 1060 aaKnown RBP17.67■□□□□ 0.42
CLN6-215ENST00000636674 NOL7Q9UMY1 257 aaKnown RBP17.67■□□□□ 0.42
CLN6-215ENST00000636674 AMOTL2Q9Y2J4 779 aa17.67■□□□□ 0.42
CLN6-215ENST00000636674 HOXC9P31274 260 aa17.66■□□□□ 0.42
CLN6-215ENST00000636674 NGDNQ8NEJ9 315 aaKnown RBP17.66■□□□□ 0.42
CLN6-215ENST00000636674 PLEKHG5O94827 1062 aa17.65■□□□□ 0.42
CLN6-215ENST00000636674 POLA2Q14181 598 aa17.65■□□□□ 0.42
CLN6-215ENST00000636674 TAF7Q15545 349 aaPredicted RBP17.65■□□□□ 0.42
CLN6-215ENST00000636674 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.65■□□□□ 0.42
CLN6-215ENST00000636674 TRIM6-TRIM34B2RNG4 842 aa17.65■□□□□ 0.42
CLN6-215ENST00000636674 ZNF500O60304 480 aaPredicted RBP17.65■□□□□ 0.42
CLN6-215ENST00000636674 UBTFL1P0CB47 393 aaPredicted RBP17.65■□□□□ 0.42
CLN6-215ENST00000636674 HSPA4P34932 840 aa17.65■□□□□ 0.42
CLN6-215ENST00000636674 IL17REQ8NFR9 667 aa17.65■□□□□ 0.42
CLN6-215ENST00000636674 RILPL2Q969X0 211 aa17.64■□□□□ 0.41
CLN6-215ENST00000636674 LTN1O94822 1766 aa17.64■□□□□ 0.41
CLN6-215ENST00000636674 CEMIPQ8WUJ3 1361 aa17.64■□□□□ 0.41
CLN6-215ENST00000636674 MCM5P33992 734 aa17.64■□□□□ 0.41
CLN6-215ENST00000636674 UNC5CLQ8IV45 518 aa17.64■□□□□ 0.41
CLN6-215ENST00000636674 NSFL1CQ9UNZ2 370 aaKnown RBP17.64■□□□□ 0.41
CLN6-215ENST00000636674 SYCE3A1L190 88 aa17.63■□□□□ 0.41
CLN6-215ENST00000636674 RAD50Q92878 1312 aa17.62■□□□□ 0.41
CLN6-215ENST00000636674 UBAP1LF5GYI3 381 aa17.62■□□□□ 0.41
CLN6-215ENST00000636674 SYAP1Q96A49 352 aaPredicted RBP17.62■□□□□ 0.41
CLN6-215ENST00000636674 WDR33Q9C0J8 1336 aaKnown RBP17.62■□□□□ 0.41
CLN6-215ENST00000636674 LMO7Q8WWI1 1683 aa17.62■□□□□ 0.41
CLN6-215ENST00000636674 HOXB7P09629 217 aa17.62■□□□□ 0.41
CLN6-215ENST00000636674 TMEM94Q12767 1356 aa17.61■□□□□ 0.41
CLN6-215ENST00000636674 PHRF1Q9P1Y6 1649 aaKnown RBP17.61■□□□□ 0.41
CLN6-215ENST00000636674 NLRP6P59044 892 aa17.61■□□□□ 0.41
CLN6-215ENST00000636674 KIAA1211Q6ZU35 1233 aa17.61■□□□□ 0.41
CLN6-215ENST00000636674 TMEM87AQ8NBN3 555 aa17.61■□□□□ 0.41
CLN6-215ENST00000636674 PI4K2BQ8TCG2 481 aa17.61■□□□□ 0.41
CLN6-215ENST00000636674 CHAMP1Q96JM3 812 aa17.61■□□□□ 0.41
CLN6-215ENST00000636674 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.61■□□□□ 0.41
CLN6-215ENST00000636674 USP42Q9H9J4 1324 aaKnown RBP17.61■□□□□ 0.41
CLN6-215ENST00000636674 HSP90AA2PQ14568 343 aaPredicted RBP17.6■□□□□ 0.41
CLN6-215ENST00000636674 HDGFL1Q5TGJ6 251 aa17.6■□□□□ 0.41
CLN6-215ENST00000636674 ZKSCAN5Q9Y2L8 839 aa17.6■□□□□ 0.41
CLN6-215ENST00000636674 SGSM2O43147 1006 aa17.6■□□□□ 0.41
CLN6-215ENST00000636674 PROSER2Q86WR7 435 aaPredicted RBP17.6■□□□□ 0.41
CLN6-215ENST00000636674 CHMP4AQ9BY43 222 aa17.6■□□□□ 0.41
CLN6-215ENST00000636674 IL25Q9H293 177 aa17.6■□□□□ 0.41
CLN6-215ENST00000636674 TOM1O60784 492 aa17.59■□□□□ 0.41
CLN6-215ENST00000636674 PHF14O94880 888 aa17.59■□□□□ 0.41
CLN6-215ENST00000636674 KIF1BPQ96EK5 621 aa17.59■□□□□ 0.41
CLN6-215ENST00000636674 RPAP1Q9BWH6 1393 aaPredicted RBP17.59■□□□□ 0.41
CLN6-215ENST00000636674 PPP1R42Q7Z4L9 355 aa17.59■□□□□ 0.41
CLN6-215ENST00000636674 KLHL34Q8N239 644 aa17.59■□□□□ 0.41
CLN6-215ENST00000636674 RHPN1Q8TCX5 695 aa17.59■□□□□ 0.41
CLN6-215ENST00000636674 NECTIN2Q92692 538 aa17.59■□□□□ 0.41
CLN6-215ENST00000636674 UPF3BQ9BZI7 483 aaKnown RBP17.59■□□□□ 0.41
CLN6-215ENST00000636674 CCDC39Q9UFE4 941 aa17.59■□□□□ 0.41
CLN6-215ENST00000636674 TTC14Q96N46 770 aa17.58■□□□□ 0.4
CLN6-215ENST00000636674 TSPY26PQ9H489 355 aa17.58■□□□□ 0.4
CLN6-215ENST00000636674 IL1RAPL2Q9NP60 686 aa17.58■□□□□ 0.4
CLN6-215ENST00000636674 NFAT5O94916 1531 aa17.58■□□□□ 0.4
CLN6-215ENST00000636674 FOXD4L5Q5VV16 416 aaPredicted RBP17.57■□□□□ 0.4
CLN6-215ENST00000636674 FOXD4L4Q8WXT5 416 aaPredicted RBP17.57■□□□□ 0.4
CLN6-215ENST00000636674 TCHHQ07283 1943 aa17.57■□□□□ 0.4
CLN6-215ENST00000636674 SURF6O75683 361 aaKnown RBP17.57■□□□□ 0.4
CLN6-215ENST00000636674 HSP90AB4PQ58FF6 505 aa17.57■□□□□ 0.4
CLN6-215ENST00000636674 CNTROBQ8N137 903 aa17.57■□□□□ 0.4
CLN6-215ENST00000636674 LSG1Q9H089 658 aaKnown RBP17.57■□□□□ 0.4
CLN6-215ENST00000636674 PHAXQ9H814 394 aaKnown RBP17.57■□□□□ 0.4
CLN6-215ENST00000636674 GLIPR1L2Q4G1C9 344 aa17.56■□□□□ 0.4
CLN6-215ENST00000636674 NUTM1Q86Y26 1132 aa17.56■□□□□ 0.4
CLN6-215ENST00000636674 ADGRL3Q9HAR2 1447 aa17.56■□□□□ 0.4
CLN6-215ENST00000636674 TTC41PQ6P2S7 1318 aa17.56■□□□□ 0.4
CLN6-215ENST00000636674 FAM184AQ8NB25 1140 aa17.55■□□□□ 0.4
CLN6-215ENST00000636674 SNX14Q9Y5W7 946 aa17.55■□□□□ 0.4
CLN6-215ENST00000636674 EIF4A1P60842 406 aaKnown RBP17.55■□□□□ 0.4
CLN6-215ENST00000636674 MTX1Q13505 466 aa17.55■□□□□ 0.4
CLN6-215ENST00000636674 CSPP1Q1MSJ5 1256 aa17.55■□□□□ 0.4
CLN6-215ENST00000636674 BEND3Q5T5X7 828 aa17.55■□□□□ 0.4
CLN6-215ENST00000636674 NOL8Q76FK4 1167 aaKnown RBP17.54■□□□□ 0.4
CLN6-215ENST00000636674 OVOS2A0A0G2JMS6 1433 aa17.54■□□□□ 0.4
CLN6-215ENST00000636674 SRGAP3O43295 1099 aa17.54■□□□□ 0.4
CLN6-215ENST00000636674 UVSSAQ2YD98 709 aa17.54■□□□□ 0.4
CLN6-215ENST00000636674 DNAAF4Q8WXU2 420 aa17.54■□□□□ 0.4
CLN6-215ENST00000636674 USP48Q86UV5 1035 aa17.53■□□□□ 0.4
CLN6-215ENST00000636674 RBM33Q96EV2 1170 aaKnown RBP17.52■□□□□ 0.4
CLN6-215ENST00000636674 NCAPD2Q15021 1401 aa17.52■□□□□ 0.4
CLN6-215ENST00000636674 GADD45BO75293 160 aaPredicted RBP17.52■□□□□ 0.39
CLN6-215ENST00000636674 GLRX3O76003 335 aaKnown RBP17.52■□□□□ 0.39
CLN6-215ENST00000636674 NBPF7P0C2Y1 421 aaPredicted RBP17.52■□□□□ 0.39
CLN6-215ENST00000636674 ZSCAN22P10073 491 aaPredicted RBP17.52■□□□□ 0.39
CLN6-215ENST00000636674 ABTB2Q8N961 1025 aa17.52■□□□□ 0.39
CLN6-215ENST00000636674 IP6K1Q92551 441 aa17.52■□□□□ 0.39
CLN6-215ENST00000636674 LIMCH1Q9UPQ0 1083 aa17.52■□□□□ 0.39
CLN6-215ENST00000636674 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.52■□□□□ 0.39
CLN6-215ENST00000636674 ADCY9O60503 1353 aa17.52■□□□□ 0.39
CLN6-215ENST00000636674 KCNB2Q92953 911 aa17.51■□□□□ 0.39
CLN6-215ENST00000636674 LETM1O95202 739 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 370.2 ms