RNA–Protein interactions for RNA: ENST00000636010.1

SPTAN1-229, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 1,472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-229ENST00000636010 MSL1Q68DK7 614 aa15.18■□□□□ 0.02
SPTAN1-229ENST00000636010 MTFR1LQ9H019 292 aa15.18■□□□□ 0.02
SPTAN1-229ENST00000636010 USP16Q9Y5T5 823 aa15.18■□□□□ 0.02
SPTAN1-229ENST00000636010 NUP98P52948 1817 aa15.18■□□□□ 0.02
SPTAN1-229ENST00000636010 RPS6KA4O75676 772 aa15.17■□□□□ 0.02
SPTAN1-229ENST00000636010 SSFA2P28290 1259 aa15.17■□□□□ 0.02
SPTAN1-229ENST00000636010 PIP4K2AP48426 406 aaPredicted RBP15.17■□□□□ 0.02
SPTAN1-229ENST00000636010 LMOD3Q0VAK6 560 aa15.17■□□□□ 0.02
SPTAN1-229ENST00000636010 CCDC87Q9NVE4 849 aa15.17■□□□□ 0.02
SPTAN1-229ENST00000636010 KIF13BQ9NQT8 1826 aa15.16■□□□□ 0.02
SPTAN1-229ENST00000636010 EIF4A1P60842 406 aaKnown RBP15.16■□□□□ 0.02
SPTAN1-229ENST00000636010 MIER1Q8N108 512 aa15.16■□□□□ 0.02
SPTAN1-229ENST00000636010 RTCBQ9Y3I0 505 aaKnown RBP15.16■□□□□ 0.02
SPTAN1-229ENST00000636010 KIAA1551Q9HCM1 1747 aa15.16■□□□□ 0.02
SPTAN1-229ENST00000636010 SOS1Q07889 1333 aaPredicted RBP15.16■□□□□ 0.02
SPTAN1-229ENST00000636010 A1BGP04217 495 aa15.15■□□□□ 0.02
SPTAN1-229ENST00000636010 KRT24Q2M2I5 525 aa15.15■□□□□ 0.02
SPTAN1-229ENST00000636010 ARHGEF1Q92888 912 aaKnown RBP15.15■□□□□ 0.02
SPTAN1-229ENST00000636010 TSPYL4Q9UJ04 414 aa15.15■□□□□ 0.02
SPTAN1-229ENST00000636010 COL15A1P39059 1388 aa15.15■□□□□ 0.02
SPTAN1-229ENST00000636010 CANXP27824 592 aaKnown RBP15.14■□□□□ 0.01
SPTAN1-229ENST00000636010 SLC16A10Q8TF71 515 aa15.14■□□□□ 0.01
SPTAN1-229ENST00000636010 SRP68Q9UHB9 627 aaKnown RBP15.14■□□□□ 0.01
SPTAN1-229ENST00000636010 SALL2Q9Y467 1007 aaPredicted RBP15.14■□□□□ 0.01
SPTAN1-229ENST00000636010 LAS1LQ9Y4W2 734 aaKnown RBP15.14■□□□□ 0.01
SPTAN1-229ENST00000636010 N4BP2Q86UW6 1770 aaPredicted RBP15.14■□□□□ 0.01
SPTAN1-229ENST00000636010 CHL1O00533 1208 aa15.13■□□□□ 0.01
SPTAN1-229ENST00000636010 TRAPPC3LQ5T215 181 aa15.13■□□□□ 0.01
SPTAN1-229ENST00000636010 FLAD1Q8NFF5 587 aa15.13■□□□□ 0.01
SPTAN1-229ENST00000636010 ANKRD36CQ5JPF3 1778 aa15.13■□□□□ 0.01
SPTAN1-229ENST00000636010 NRXN2Q9P2S2 1712 aa15.12■□□□□ 0.01
SPTAN1-229ENST00000636010 CCER2I3L3R5 266 aa15.12■□□□□ 0.01
SPTAN1-229ENST00000636010 GIGYF1O75420 1035 aaPredicted RBP15.12■□□□□ 0.01
SPTAN1-229ENST00000636010 SNRPA1P09661 255 aaKnown RBP15.12■□□□□ 0.01
SPTAN1-229ENST00000636010 USP42Q9H9J4 1324 aaKnown RBP15.11■□□□□ 0.01
SPTAN1-229ENST00000636010 BRCA1P38398 1863 aaKnown RBP15.11■□□□□ 0.01
SPTAN1-229ENST00000636010 ANKRD31Q8N7Z5 1873 aa15.11■□□□□ 0.01
SPTAN1-229ENST00000636010 NBPF26B4DH59 902 aa15.11■□□□□ 0.01
SPTAN1-229ENST00000636010 STARD3NLO95772 234 aa15.11■□□□□ 0.01
SPTAN1-229ENST00000636010 ZNF853P0CG23 659 aa15.11■□□□□ 0.01
SPTAN1-229ENST00000636010 HMGB2P26583 209 aaKnown RBP15.11■□□□□ 0.01
SPTAN1-229ENST00000636010 EIF5P55010 431 aaKnown RBP15.11■□□□□ 0.01
SPTAN1-229ENST00000636010 NBPF10Q6P3W6 841 aaKnown RBP15.11■□□□□ 0.01
SPTAN1-229ENST00000636010 WWC1Q8IX03 1113 aa15.11■□□□□ 0.01
SPTAN1-229ENST00000636010 NBPF15Q8N660 670 aa15.11■□□□□ 0.01
SPTAN1-229ENST00000636010 MBIPQ9NS73 344 aa15.11■□□□□ 0.01
SPTAN1-229ENST00000636010 GYS1P13807 737 aa15.1■□□□□ 0.01
SPTAN1-229ENST00000636010 ADRA2BP18089 450 aa15.1■□□□□ 0.01
SPTAN1-229ENST00000636010 CFAP44Q96MT7 982 aa15.1■□□□□ 0.01
SPTAN1-229ENST00000636010 TEX13AQ9BXU3 409 aaPredicted RBP15.1■□□□□ 0.01
SPTAN1-229ENST00000636010 GOLGB1Q14789 3259 aaKnown RBP15.1■□□□□ 0.01
SPTAN1-229ENST00000636010 CACNA1SQ13698 1873 aa15.09■□□□□ 0.01
SPTAN1-229ENST00000636010 RFC4P35249 363 aa15.09■□□□□ 0.01
SPTAN1-229ENST00000636010 BCL2L12Q9HB09 334 aa15.09■□□□□ 0.01
SPTAN1-229ENST00000636010 ZNF330Q9Y3S2 320 aaPredicted RBP15.09■□□□□ 0.01
SPTAN1-229ENST00000636010 ARFGEF2Q9Y6D5 1785 aa15.09■□□□□ 0.01
SPTAN1-229ENST00000636010 FKBP8Q14318 412 aa15.08■□□□□ 0.01
SPTAN1-229ENST00000636010 CCDC27Q2M243 656 aa15.08■□□□□ 0.01
SPTAN1-229ENST00000636010 USPL1Q5W0Q7 1092 aa15.08■□□□□ 0.01
SPTAN1-229ENST00000636010 ARXQ96QS3 562 aa15.08■□□□□ 0.01
SPTAN1-229ENST00000636010 BABAM1Q9NWV8 329 aa15.08■□□□□ 0.01
SPTAN1-229ENST00000636010 CACNA1FO60840 1977 aa15.08■□□□□ 0
SPTAN1-229ENST00000636010 IL6STP40189 918 aaPredicted RBP15.08■□□□□ 0
SPTAN1-229ENST00000636010 TSR2Q969E8 191 aaKnown RBP15.08■□□□□ 0
SPTAN1-229ENST00000636010 ANXA1P04083 346 aa15.07■□□□□ 0
SPTAN1-229ENST00000636010 NECTIN2Q92692 538 aa15.07■□□□□ 0
SPTAN1-229ENST00000636010 SYT17Q9BSW7 474 aa15.07■□□□□ 0
SPTAN1-229ENST00000636010 FHDC1Q9C0D6 1143 aaPredicted RBP15.07■□□□□ 0
SPTAN1-229ENST00000636010 SPINK5Q9NQ38 1064 aaPredicted RBP15.07■□□□□ 0
SPTAN1-229ENST00000636010 IFT57Q9NWB7 429 aa15.07■□□□□ 0
SPTAN1-229ENST00000636010 NARFQ9UHQ1 456 aa15.07■□□□□ 0
SPTAN1-229ENST00000636010 TBC1D2BQ9UPU7 963 aa15.07■□□□□ 0
SPTAN1-229ENST00000636010 DLEC1Q9Y238 1755 aa15.06■□□□□ 0
SPTAN1-229ENST00000636010 COL11A2P13942 1736 aaPredicted RBP15.06■□□□□ 0
SPTAN1-229ENST00000636010 POLD1P28340 1107 aa15.06■□□□□ 0
SPTAN1-229ENST00000636010 GNAI1P63096 354 aa15.06■□□□□ 0
SPTAN1-229ENST00000636010 PROSER3Q2NL68 480 aa15.06■□□□□ 0
SPTAN1-229ENST00000636010 UTRNP46939 3433 aa15.05■□□□□ -0
SPTAN1-229ENST00000636010 MMP10P09238 476 aa15.05■□□□□ -0
SPTAN1-229ENST00000636010 EIF2S2P20042 333 aaKnown RBP15.05■□□□□ -0
SPTAN1-229ENST00000636010 DDR1Q08345 913 aa15.05■□□□□ -0
SPTAN1-229ENST00000636010 KLHL34Q8N239 644 aa15.05■□□□□ -0
SPTAN1-229ENST00000636010 MYL6BP14649 208 aa15.04■□□□□ -0
SPTAN1-229ENST00000636010 PDIA6Q15084 440 aa15.04■□□□□ -0
SPTAN1-229ENST00000636010 LRP10Q7Z4F1 713 aa15.04■□□□□ -0
SPTAN1-229ENST00000636010 C8orf58Q8NAV2 365 aa15.04■□□□□ -0
SPTAN1-229ENST00000636010 ZNF521Q96K83 1311 aa15.04■□□□□ -0
SPTAN1-229ENST00000636010 ELL2O00472 640 aaPredicted RBP15.03■□□□□ -0
SPTAN1-229ENST00000636010 CAMTA2O94983 1202 aa15.03■□□□□ -0
SPTAN1-229ENST00000636010 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
SPTAN1-229ENST00000636010 DZIP3Q86Y13 1208 aaKnown RBP15.03■□□□□ -0
SPTAN1-229ENST00000636010 NGEFQ8N5V2 710 aa15.03■□□□□ -0
SPTAN1-229ENST00000636010 TSPYL6Q8N831 410 aa15.03■□□□□ -0
SPTAN1-229ENST00000636010 NLGN2Q8NFZ4 835 aa15.03■□□□□ -0
SPTAN1-229ENST00000636010 ZPR1O75312 459 aa15.02■□□□□ -0
SPTAN1-229ENST00000636010 CALD1Q05682 793 aaKnown RBP15.02■□□□□ -0
SPTAN1-229ENST00000636010 DUSP27Q5VZP5 1158 aa15.02■□□□□ -0
SPTAN1-229ENST00000636010 TTLL7Q6ZT98 887 aa15.02■□□□□ -0
SPTAN1-229ENST00000636010 NLGN1Q8N2Q7 840 aa15.02■□□□□ -0
SPTAN1-229ENST00000636010 FANCIQ9NVI1 1328 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms