RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 CARNS1A5YM72 827 aa12.21□□□□□ -0.45
LINC01108-202ENST00000635227 PLA2G4AP47712 749 aa12.21□□□□□ -0.45
LINC01108-202ENST00000635227 WDR44Q5JSH3 913 aa12.21□□□□□ -0.45
LINC01108-202ENST00000635227 ZDHHC1Q8WTX9 485 aa12.21□□□□□ -0.45
LINC01108-202ENST00000635227 SCG3Q8WXD2 468 aaKnown RBP12.21□□□□□ -0.45
LINC01108-202ENST00000635227 TIMMDC1Q9NPL8 285 aa12.21□□□□□ -0.45
LINC01108-202ENST00000635227 PARP3Q9Y6F1 533 aa12.21□□□□□ -0.45
LINC01108-202ENST00000635227 TMEM88BA6NKF7 163 aa12.2□□□□□ -0.46
LINC01108-202ENST00000635227 SWI5Q1ZZU3 235 aa12.2□□□□□ -0.46
LINC01108-202ENST00000635227 CCDC155Q8N6L0 562 aa12.2□□□□□ -0.46
LINC01108-202ENST00000635227 ATAD2Q6PL18 1390 aa12.19□□□□□ -0.46
LINC01108-202ENST00000635227 CSB-PGBD3P0DP91 1061 aa12.19□□□□□ -0.46
LINC01108-202ENST00000635227 SH3PXD2AQ5TCZ1 1133 aa12.19□□□□□ -0.46
LINC01108-202ENST00000635227 SLAIN2Q9P270 581 aa12.19□□□□□ -0.46
LINC01108-202ENST00000635227 RIMBP3CA6NJZ7 1639 aa12.19□□□□□ -0.46
LINC01108-202ENST00000635227 RIMBP3BA6NNM3 1639 aa12.19□□□□□ -0.46
LINC01108-202ENST00000635227 RIMBP3Q9UFD9 1639 aa12.19□□□□□ -0.46
LINC01108-202ENST00000635227 THOC2Q8NI27 1593 aaKnown RBP12.18□□□□□ -0.46
LINC01108-202ENST00000635227 WEE1P30291 646 aa12.18□□□□□ -0.46
LINC01108-202ENST00000635227 TEAD4Q15561 434 aa12.18□□□□□ -0.46
LINC01108-202ENST00000635227 PRIMPOLQ96LW4 560 aa12.18□□□□□ -0.46
LINC01108-202ENST00000635227 PPP1R12BO60237 982 aaPredicted RBP12.17□□□□□ -0.46
LINC01108-202ENST00000635227 PRMT3O60678 531 aa12.17□□□□□ -0.46
LINC01108-202ENST00000635227 NOS2P35228 1153 aa12.17□□□□□ -0.46
LINC01108-202ENST00000635227 VEGFBP49765 207 aa12.17□□□□□ -0.46
LINC01108-202ENST00000635227 RETREG2Q8NC44 543 aa12.17□□□□□ -0.46
LINC01108-202ENST00000635227 CHMP7Q8WUX9 453 aaPredicted RBP12.17□□□□□ -0.46
LINC01108-202ENST00000635227 L3MBTL2Q969R5 705 aa12.17□□□□□ -0.46
LINC01108-202ENST00000635227 NXF1Q9UBU9 619 aaKnown RBP12.17□□□□□ -0.46
LINC01108-202ENST00000635227 DYRK1BQ9Y463 629 aa12.17□□□□□ -0.46
LINC01108-202ENST00000635227 PPFIA3O75145 1194 aa12.16□□□□□ -0.46
LINC01108-202ENST00000635227 PSMA6P60900 246 aaKnown RBP12.16□□□□□ -0.46
LINC01108-202ENST00000635227 AIDAQ96BJ3 306 aa12.16□□□□□ -0.46
LINC01108-202ENST00000635227 GAS2L1Q99501 681 aaPredicted RBP12.16□□□□□ -0.46
LINC01108-202ENST00000635227 EML1O00423 815 aa12.15□□□□□ -0.46
LINC01108-202ENST00000635227 IGFBP4P22692 258 aa12.15□□□□□ -0.46
LINC01108-202ENST00000635227 OCLNQ16625 522 aa12.15□□□□□ -0.46
LINC01108-202ENST00000635227 ZNF232Q9UNY5 417 aa12.15□□□□□ -0.46
LINC01108-202ENST00000635227 A0A1B0GTH6 734 aa12.14□□□□□ -0.47
LINC01108-202ENST00000635227 SERTM1A2A2V5 107 aa12.14□□□□□ -0.47
LINC01108-202ENST00000635227 TXLNAP40222 546 aa12.14□□□□□ -0.47
LINC01108-202ENST00000635227 CLP1Q92989 425 aaKnown RBP12.14□□□□□ -0.47
LINC01108-202ENST00000635227 GPAMQ9HCL2 828 aa12.14□□□□□ -0.47
LINC01108-202ENST00000635227 SCRIBQ14160 1630 aa12.13□□□□□ -0.47
LINC01108-202ENST00000635227 MSX1P28360 303 aa12.13□□□□□ -0.47
LINC01108-202ENST00000635227 POTEAQ6S8J7 498 aa12.13□□□□□ -0.47
LINC01108-202ENST00000635227 C2orf49Q9BVC5 232 aaPredicted RBP12.13□□□□□ -0.47
LINC01108-202ENST00000635227 CUEDC1Q9NWM3 386 aaPredicted RBP12.13□□□□□ -0.47
LINC01108-202ENST00000635227 F11P03951 625 aa12.12□□□□□ -0.47
LINC01108-202ENST00000635227 ATP4AP20648 1035 aa12.12□□□□□ -0.47
LINC01108-202ENST00000635227 ITGA6P23229 1130 aa12.12□□□□□ -0.47
LINC01108-202ENST00000635227 ZNF775Q96BV0 537 aaPredicted RBP12.12□□□□□ -0.47
LINC01108-202ENST00000635227 BAZ1AQ9NRL2 1556 aaPredicted RBP12.11□□□□□ -0.47
LINC01108-202ENST00000635227 TERTO14746 1132 aaKnown RBP12.11□□□□□ -0.47
LINC01108-202ENST00000635227 NBPF1Q3BBV0 1214 aa12.11□□□□□ -0.47
LINC01108-202ENST00000635227 RIPOR1Q6ZS17 1223 aa12.11□□□□□ -0.47
LINC01108-202ENST00000635227 STAG2Q8N3U4 1231 aa12.11□□□□□ -0.47
LINC01108-202ENST00000635227 CHMP3Q9Y3E7 222 aa12.11□□□□□ -0.47
LINC01108-202ENST00000635227 HCN4Q9Y3Q4 1203 aa12.11□□□□□ -0.47
LINC01108-202ENST00000635227 FKBP5Q13451 457 aaPredicted RBP12.1□□□□□ -0.47
LINC01108-202ENST00000635227 USTQ9Y2C2 406 aa12.1□□□□□ -0.47
LINC01108-202ENST00000635227 H3BM21 787 aa12.09□□□□□ -0.47
LINC01108-202ENST00000635227 HIRAP54198 1017 aaPredicted RBP12.09□□□□□ -0.47
LINC01108-202ENST00000635227 RUBCNLQ9H714 662 aa12.09□□□□□ -0.47
LINC01108-202ENST00000635227 ZDHHC3Q9NYG2 299 aa12.09□□□□□ -0.47
LINC01108-202ENST00000635227 CXXC1Q9P0U4 656 aaPredicted RBP12.09□□□□□ -0.47
LINC01108-202ENST00000635227 FOXO3O43524 673 aa12.08□□□□□ -0.48
LINC01108-202ENST00000635227 ATP2B4P23634 1241 aa12.08□□□□□ -0.48
LINC01108-202ENST00000635227 DBN1Q16643 649 aa12.08□□□□□ -0.48
LINC01108-202ENST00000635227 NPAS3Q8IXF0 933 aa12.08□□□□□ -0.48
LINC01108-202ENST00000635227 THBS1P07996 1170 aa12.07□□□□□ -0.48
LINC01108-202ENST00000635227 PHACTR1Q9C0D0 580 aa12.07□□□□□ -0.48
LINC01108-202ENST00000635227 TATP17735 454 aaPredicted RBP12.06□□□□□ -0.48
LINC01108-202ENST00000635227 NFX1Q12986 1120 aaKnown RBP12.06□□□□□ -0.48
LINC01108-202ENST00000635227 ALDH16A1Q8IZ83 802 aa12.06□□□□□ -0.48
LINC01108-202ENST00000635227 C1orf216Q8TAB5 229 aa12.06□□□□□ -0.48
LINC01108-202ENST00000635227 C7orf43Q8WVR3 580 aa12.06□□□□□ -0.48
LINC01108-202ENST00000635227 KLRG1Q96E93 195 aa12.06□□□□□ -0.48
LINC01108-202ENST00000635227 NGLY1Q96IV0 654 aa12.06□□□□□ -0.48
LINC01108-202ENST00000635227 CDC14CA4D256 554 aa12.05□□□□□ -0.48
LINC01108-202ENST00000635227 CAPN12Q6ZSI9 719 aa12.05□□□□□ -0.48
LINC01108-202ENST00000635227 TRIM22Q8IYM9 498 aa12.05□□□□□ -0.48
LINC01108-202ENST00000635227 VWA5B2Q8N398 1253 aa12.05□□□□□ -0.48
LINC01108-202ENST00000635227 ZNF837Q96EG3 531 aaPredicted RBP12.05□□□□□ -0.48
LINC01108-202ENST00000635227 MKNK1Q9BUB5 465 aa12.05□□□□□ -0.48
LINC01108-202ENST00000635227 CRISPLD1Q9H336 500 aa12.05□□□□□ -0.48
LINC01108-202ENST00000635227 SCNN1AP37088 669 aa12.04□□□□□ -0.48
LINC01108-202ENST00000635227 ARSJQ5FYB0 599 aaPredicted RBP12.04□□□□□ -0.48
LINC01108-202ENST00000635227 PGBD3Q8N328 593 aa12.04□□□□□ -0.48
LINC01108-202ENST00000635227 ZIC5Q96T25 663 aa12.04□□□□□ -0.48
LINC01108-202ENST00000635227 ERBB4Q15303 1308 aa12.04□□□□□ -0.48
LINC01108-202ENST00000635227 SSFA2P28290 1259 aa12.03□□□□□ -0.48
LINC01108-202ENST00000635227 LCE2CQ5TA81 110 aa12.03□□□□□ -0.48
LINC01108-202ENST00000635227 C1orf53Q5VUE5 145 aa12.03□□□□□ -0.48
LINC01108-202ENST00000635227 PHLDB3Q6NSJ2 640 aa12.03□□□□□ -0.48
LINC01108-202ENST00000635227 BICDL1Q6ZP65 573 aa12.03□□□□□ -0.48
LINC01108-202ENST00000635227 NANOS1Q8WY41 292 aaKnown RBP12.03□□□□□ -0.48
LINC01108-202ENST00000635227 VTI1AQ96AJ9 217 aa12.03□□□□□ -0.48
LINC01108-202ENST00000635227 NUCKS1Q9H1E3 243 aaKnown RBP12.03□□□□□ -0.48
LINC01108-202ENST00000635227 A0A1W2PNR3 127 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms