RNA–Protein interactions for RNA: ENST00000632040.1

RBM8A-205, Transcript of RNA binding motif protein 8A, human

TSL 2

Gene RBM8A, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM8A-205	ENST00000632040	SOS1	Q07889	1333 aa	Predicted RBP	13.71	□□□□□ -0.21
RBM8A-205	ENST00000632040	USP42	Q9H9J4	1324 aa	Known RBP	13.71	□□□□□ -0.21
RBM8A-205	ENST00000632040	PRAMEF22	A3QJZ6	481 aa		13.71	□□□□□ -0.21
RBM8A-205	ENST00000632040	USPL1	Q5W0Q7	1092 aa		13.71	□□□□□ -0.21
RBM8A-205	ENST00000632040	VSIG10	Q8N0Z9	540 aa		13.71	□□□□□ -0.21
RBM8A-205	ENST00000632040	PLEKHF1	Q96S99	279 aa		13.71	□□□□□ -0.21
RBM8A-205	ENST00000632040	PIP4K2A	P48426	406 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM8A-205	ENST00000632040	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM8A-205	ENST00000632040	PARP3	Q9Y6F1	533 aa		13.7	□□□□□ -0.22
RBM8A-205	ENST00000632040	COL15A1	P39059	1388 aa		13.7	□□□□□ -0.22
RBM8A-205	ENST00000632040	KDM3B	Q7LBC6	1761 aa		13.69	□□□□□ -0.22
RBM8A-205	ENST00000632040	ZPR1	O75312	459 aa		13.69	□□□□□ -0.22
RBM8A-205	ENST00000632040	A1BG	P04217	495 aa		13.69	□□□□□ -0.22
RBM8A-205	ENST00000632040	NEFM	P07197	916 aa		13.69	□□□□□ -0.22
RBM8A-205	ENST00000632040	FMNL2	Q96PY5	1086 aa		13.69	□□□□□ -0.22
RBM8A-205	ENST00000632040	THUMPD2	Q9BTF0	503 aa	Known RBP	13.69	□□□□□ -0.22
RBM8A-205	ENST00000632040	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.68	□□□□□ -0.22
RBM8A-205	ENST00000632040	BRCA1	P38398	1863 aa	Known RBP	13.68	□□□□□ -0.22
RBM8A-205	ENST00000632040		A0A0G2JLW4	131 aa		13.68	□□□□□ -0.22
RBM8A-205	ENST00000632040	STARD3NL	O95772	234 aa		13.68	□□□□□ -0.22
RBM8A-205	ENST00000632040	DDR1	Q08345	913 aa		13.68	□□□□□ -0.22
RBM8A-205	ENST00000632040	USP16	Q9Y5T5	823 aa		13.68	□□□□□ -0.22
RBM8A-205	ENST00000632040	NFE2L2	Q16236	605 aa		13.67	□□□□□ -0.22
RBM8A-205	ENST00000632040	CCDC146	Q8IYE0	955 aa		13.67	□□□□□ -0.22
RBM8A-205	ENST00000632040	BCL2L12	Q9HB09	334 aa		13.67	□□□□□ -0.22
RBM8A-205	ENST00000632040	NARF	Q9UHQ1	456 aa		13.67	□□□□□ -0.22
RBM8A-205	ENST00000632040	PXDNL	A1KZ92	1463 aa		13.67	□□□□□ -0.22
RBM8A-205	ENST00000632040	MAPK8IP3	Q9UPT6	1336 aa		13.66	□□□□□ -0.22
RBM8A-205	ENST00000632040	HTATSF1	O43719	755 aa	Known RBP	13.66	□□□□□ -0.22
RBM8A-205	ENST00000632040	TM4SF1	P30408	202 aa		13.66	□□□□□ -0.22
RBM8A-205	ENST00000632040	TAF7	Q15545	349 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM8A-205	ENST00000632040	TBC1D2B	Q9UPU7	963 aa		13.66	□□□□□ -0.22
RBM8A-205	ENST00000632040	LAMB4	A4D0S4	1761 aa		13.66	□□□□□ -0.22
RBM8A-205	ENST00000632040	C10orf71	Q711Q0	1435 aa		13.65	□□□□□ -0.22
RBM8A-205	ENST00000632040	POLRMT	O00411	1230 aa	Known RBP	13.65	□□□□□ -0.22
RBM8A-205	ENST00000632040	DPEP1	P16444	411 aa		13.65	□□□□□ -0.22
RBM8A-205	ENST00000632040	EIF5	P55010	431 aa	Known RBP	13.65	□□□□□ -0.22
RBM8A-205	ENST00000632040	BICDL1	Q6ZP65	573 aa		13.65	□□□□□ -0.22
RBM8A-205	ENST00000632040	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM8A-205	ENST00000632040	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM8A-205	ENST00000632040	RRP7A	Q9Y3A4	280 aa	Known RBP	13.65	□□□□□ -0.22
RBM8A-205	ENST00000632040	SCN7A	Q01118	1682 aa		13.65	□□□□□ -0.22
RBM8A-205	ENST00000632040	BCOR	Q6W2J9	1755 aa		13.65	□□□□□ -0.22
RBM8A-205	ENST00000632040	NRXN2	Q9P2S2	1712 aa		13.64	□□□□□ -0.23
RBM8A-205	ENST00000632040	GRIN3B	O60391	1043 aa		13.64	□□□□□ -0.23
RBM8A-205	ENST00000632040	ZEB1	P37275	1124 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM8A-205	ENST00000632040	RIPK4	P57078	832 aa		13.64	□□□□□ -0.23
RBM8A-205	ENST00000632040	NFIX	Q14938	502 aa		13.64	□□□□□ -0.23
RBM8A-205	ENST00000632040	NEUROD2	Q15784	382 aa		13.64	□□□□□ -0.23
RBM8A-205	ENST00000632040	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM8A-205	ENST00000632040	PNN	Q9H307	717 aa	Known RBP	13.64	□□□□□ -0.23
RBM8A-205	ENST00000632040	SNRPA1	P09661	255 aa	Known RBP	13.63	□□□□□ -0.23
RBM8A-205	ENST00000632040	TGFB2	P61812	414 aa		13.63	□□□□□ -0.23
RBM8A-205	ENST00000632040	BCS1L	Q9Y276	419 aa		13.63	□□□□□ -0.23
RBM8A-205	ENST00000632040	CACNA1S	Q13698	1873 aa		13.63	□□□□□ -0.23
RBM8A-205	ENST00000632040	ANKRD31	Q8N7Z5	1873 aa		13.62	□□□□□ -0.23
RBM8A-205	ENST00000632040	KCNA3	P22001	575 aa		13.62	□□□□□ -0.23
RBM8A-205	ENST00000632040	CHRNA5	P30532	468 aa		13.62	□□□□□ -0.23
RBM8A-205	ENST00000632040	IL6ST	P40189	918 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM8A-205	ENST00000632040	TBC1D9B	Q66K14	1250 aa		13.62	□□□□□ -0.23
RBM8A-205	ENST00000632040	ADAMTS8	Q9UP79	889 aa		13.62	□□□□□ -0.23
RBM8A-205	ENST00000632040	ARFGEF1	Q9Y6D6	1849 aa		13.62	□□□□□ -0.23
RBM8A-205	ENST00000632040		A0A087WZG4	1122 aa		13.61	□□□□□ -0.23
RBM8A-205	ENST00000632040	NBPF26	B4DH59	902 aa		13.61	□□□□□ -0.23
RBM8A-205	ENST00000632040	SERPINB2	P05120	415 aa		13.61	□□□□□ -0.23
RBM8A-205	ENST00000632040	TMPO	P42166	694 aa	Known RBP	13.61	□□□□□ -0.23
RBM8A-205	ENST00000632040	WDR43	Q15061	677 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
RBM8A-205	ENST00000632040	NBPF10	Q6P3W6	841 aa	Known RBP	13.61	□□□□□ -0.23
RBM8A-205	ENST00000632040	CCDC24	Q8N4L8	307 aa		13.61	□□□□□ -0.23
RBM8A-205	ENST00000632040	NBPF15	Q8N660	670 aa		13.61	□□□□□ -0.23
RBM8A-205	ENST00000632040	NPM2	Q86SE8	214 aa	Known RBP	13.6	□□□□□ -0.23
RBM8A-205	ENST00000632040	DZIP3	Q86Y13	1208 aa	Known RBP	13.6	□□□□□ -0.23
RBM8A-205	ENST00000632040	DLEC1	Q9Y238	1755 aa		13.6	□□□□□ -0.23
RBM8A-205	ENST00000632040	CARMIL3	Q8ND23	1372 aa		13.59	□□□□□ -0.23
RBM8A-205	ENST00000632040	EIF4A1	P60842	406 aa	Known RBP	13.59	□□□□□ -0.23
RBM8A-205	ENST00000632040	CCDC184	Q52MB2	194 aa		13.59	□□□□□ -0.23
RBM8A-205	ENST00000632040	NGEF	Q8N5V2	710 aa		13.59	□□□□□ -0.23
RBM8A-205	ENST00000632040	NUP98	P52948	1817 aa		13.59	□□□□□ -0.23
RBM8A-205	ENST00000632040	SENP3-EIF4A1	A0A087X0R7	540 aa		13.58	□□□□□ -0.24
RBM8A-205	ENST00000632040	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM8A-205	ENST00000632040	CAMTA2	O94983	1202 aa		13.58	□□□□□ -0.24
RBM8A-205	ENST00000632040	PNISR	Q8TF01	805 aa	Known RBP	13.58	□□□□□ -0.24
RBM8A-205	ENST00000632040	RUNDC1	Q96C34	613 aa		13.58	□□□□□ -0.24
RBM8A-205	ENST00000632040	TSPYL4	Q9UJ04	414 aa		13.58	□□□□□ -0.24
RBM8A-205	ENST00000632040	CCDC88A	Q3V6T2	1871 aa		13.58	□□□□□ -0.24
RBM8A-205	ENST00000632040	COL11A2	P13942	1736 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM8A-205	ENST00000632040	GIGYF1	O75420	1035 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM8A-205	ENST00000632040	ARHGAP27	Q6ZUM4	889 aa		13.57	□□□□□ -0.24
RBM8A-205	ENST00000632040	PIM2	Q9P1W9	311 aa		13.57	□□□□□ -0.24
RBM8A-205	ENST00000632040	LAS1L	Q9Y4W2	734 aa	Known RBP	13.57	□□□□□ -0.24
RBM8A-205	ENST00000632040	MYL6B	P14649	208 aa		13.56	□□□□□ -0.24
RBM8A-205	ENST00000632040	ZNF526	Q8TF50	670 aa	Predicted RBP	13.56	□□□□□ -0.24
RBM8A-205	ENST00000632040	TRIM35	Q9UPQ4	493 aa		13.56	□□□□□ -0.24
RBM8A-205	ENST00000632040	SBF1	O95248	1867 aa		13.56	□□□□□ -0.24
RBM8A-205	ENST00000632040	FAM177B	A6PVY3	158 aa		13.55	□□□□□ -0.24
RBM8A-205	ENST00000632040	HLF	Q16534	295 aa		13.55	□□□□□ -0.24
RBM8A-205	ENST00000632040	DALRD3	Q5D0E6	543 aa	Known RBP	13.55	□□□□□ -0.24
RBM8A-205	ENST00000632040	PRR5L	Q6MZQ0	368 aa		13.55	□□□□□ -0.24
RBM8A-205	ENST00000632040	SETDB2	Q96T68	719 aa		13.55	□□□□□ -0.24
RBM8A-205	ENST00000632040	ATP10D	Q9P241	1426 aa		13.55	□□□□□ -0.24

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