RNA–Protein interactions for RNA: ENST00000631641.1

DDX3X-222, Transcript of DEAD-box helicase 3 X-linked, human

TSL 3

Gene DDX3X, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX3X-222	ENST00000631641	KIF13B	Q9NQT8	1826 aa		11.07	□□□□□ -0.64
DDX3X-222	ENST00000631641	COL15A1	P39059	1388 aa		11.06	□□□□□ -0.64
DDX3X-222	ENST00000631641	FCHSD2	O94868	740 aa		11.06	□□□□□ -0.64
DDX3X-222	ENST00000631641	STARD3NL	O95772	234 aa		11.06	□□□□□ -0.64
DDX3X-222	ENST00000631641	USPL1	Q5W0Q7	1092 aa		11.06	□□□□□ -0.64
DDX3X-222	ENST00000631641	ZNF526	Q8TF50	670 aa	Predicted RBP	11.06	□□□□□ -0.64
DDX3X-222	ENST00000631641	NUDC	Q9Y266	331 aa		11.06	□□□□□ -0.64
DDX3X-222	ENST00000631641	ZBTB1	Q9Y2K1	713 aa		11.06	□□□□□ -0.64
DDX3X-222	ENST00000631641	MYH14	Q7Z406	1995 aa	Known RBP	11.06	□□□□□ -0.64
DDX3X-222	ENST00000631641	POLRMT	O00411	1230 aa	Known RBP	11.05	□□□□□ -0.64
DDX3X-222	ENST00000631641	TM4SF1	P30408	202 aa		11.05	□□□□□ -0.64
DDX3X-222	ENST00000631641	PIM2	Q9P1W9	311 aa		11.05	□□□□□ -0.64
DDX3X-222	ENST00000631641	NARF	Q9UHQ1	456 aa		11.05	□□□□□ -0.64
DDX3X-222	ENST00000631641	KIAA1551	Q9HCM1	1747 aa		11.04	□□□□□ -0.64
DDX3X-222	ENST00000631641	KCNA3	P22001	575 aa		11.04	□□□□□ -0.64
DDX3X-222	ENST00000631641	DALRD3	Q5D0E6	543 aa	Known RBP	11.04	□□□□□ -0.64
DDX3X-222	ENST00000631641	ZNF790	Q6PG37	636 aa		11.04	□□□□□ -0.64
DDX3X-222	ENST00000631641	ARHGAP27	Q6ZUM4	889 aa		11.04	□□□□□ -0.64
DDX3X-222	ENST00000631641	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.04	□□□□□ -0.64
DDX3X-222	ENST00000631641	MRS2	Q9HD23	443 aa		11.04	□□□□□ -0.64
DDX3X-222	ENST00000631641	CEMIP	Q8WUJ3	1361 aa		11.03	□□□□□ -0.64
DDX3X-222	ENST00000631641		A0A087WZG4	1122 aa		11.03	□□□□□ -0.64
DDX3X-222	ENST00000631641	PRKAR2B	P31323	418 aa		11.03	□□□□□ -0.64
DDX3X-222	ENST00000631641	NFIX	Q14938	502 aa		11.03	□□□□□ -0.64
DDX3X-222	ENST00000631641	CCDC184	Q52MB2	194 aa		11.03	□□□□□ -0.64
DDX3X-222	ENST00000631641	IL17RE	Q8NFR9	667 aa		11.03	□□□□□ -0.64
DDX3X-222	ENST00000631641	RSPH6A	Q9H0K4	717 aa		11.03	□□□□□ -0.64
DDX3X-222	ENST00000631641	HEG1	Q9ULI3	1381 aa		11.03	□□□□□ -0.64
DDX3X-222	ENST00000631641	CANX	P27824	592 aa	Known RBP	11.02	□□□□□ -0.65
DDX3X-222	ENST00000631641	EIF5	P55010	431 aa	Known RBP	11.02	□□□□□ -0.65
DDX3X-222	ENST00000631641	ZNF496	Q96IT1	587 aa	Predicted RBP	11.02	□□□□□ -0.65
DDX3X-222	ENST00000631641	FMNL2	Q96PY5	1086 aa		11.02	□□□□□ -0.65
DDX3X-222	ENST00000631641	UBR2	Q8IWV8	1755 aa		11.01	□□□□□ -0.65
DDX3X-222	ENST00000631641	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.01	□□□□□ -0.65
DDX3X-222	ENST00000631641	CHRNA5	P30532	468 aa		11.01	□□□□□ -0.65
DDX3X-222	ENST00000631641	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.01	□□□□□ -0.65
DDX3X-222	ENST00000631641	NPM2	Q86SE8	214 aa	Known RBP	11.01	□□□□□ -0.65
DDX3X-222	ENST00000631641	PHACTR3	Q96KR7	559 aa		11.01	□□□□□ -0.65
DDX3X-222	ENST00000631641	BCL2L12	Q9HB09	334 aa		11.01	□□□□□ -0.65
DDX3X-222	ENST00000631641	N4BP2	Q86UW6	1770 aa	Predicted RBP	11	□□□□□ -0.65
DDX3X-222	ENST00000631641	BTBD11	A6QL63	1104 aa		11	□□□□□ -0.65
DDX3X-222	ENST00000631641	KIF3C	O14782	793 aa		11	□□□□□ -0.65
DDX3X-222	ENST00000631641	SERPINB2	P05120	415 aa		11	□□□□□ -0.65
DDX3X-222	ENST00000631641	IL6ST	P40189	918 aa	Predicted RBP	11	□□□□□ -0.65
DDX3X-222	ENST00000631641	C9orf131	Q5VYM1	1079 aa		11	□□□□□ -0.65
DDX3X-222	ENST00000631641	RTF1	Q92541	710 aa	Known RBP	11	□□□□□ -0.65
DDX3X-222	ENST00000631641	HSPA6	P17066	643 aa		10.99	□□□□□ -0.65
DDX3X-222	ENST00000631641	PNISR	Q8TF01	805 aa	Known RBP	10.99	□□□□□ -0.65
DDX3X-222	ENST00000631641	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.99	□□□□□ -0.65
DDX3X-222	ENST00000631641	HTATSF1	O43719	755 aa	Known RBP	10.98	□□□□□ -0.65
DDX3X-222	ENST00000631641	BICDL1	Q6ZP65	573 aa		10.98	□□□□□ -0.65
DDX3X-222	ENST00000631641	RNF181	Q9P0P0	153 aa		10.98	□□□□□ -0.65
DDX3X-222	ENST00000631641	PDZRN3	Q9UPQ7	1066 aa		10.98	□□□□□ -0.65
DDX3X-222	ENST00000631641	CARMIL3	Q8ND23	1372 aa		10.98	□□□□□ -0.65
DDX3X-222	ENST00000631641	BRCA1	P38398	1863 aa	Known RBP	10.98	□□□□□ -0.65
DDX3X-222	ENST00000631641		H0YIN7	160 aa		10.97	□□□□□ -0.65
DDX3X-222	ENST00000631641	TOMM70	O94826	608 aa		10.97	□□□□□ -0.65
DDX3X-222	ENST00000631641	NEFM	P07197	916 aa		10.97	□□□□□ -0.65
DDX3X-222	ENST00000631641	C2CD5	Q86YS7	1000 aa		10.97	□□□□□ -0.65
DDX3X-222	ENST00000631641	TTLL6	Q8N841	843 aa		10.97	□□□□□ -0.65
DDX3X-222	ENST00000631641	KDM2B	Q8NHM5	1336 aa		10.97	□□□□□ -0.65
DDX3X-222	ENST00000631641	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.97	□□□□□ -0.65
DDX3X-222	ENST00000631641	ARFGEF1	Q9Y6D6	1849 aa		10.96	□□□□□ -0.65
DDX3X-222	ENST00000631641	NRXN2	Q9P2S2	1712 aa		10.96	□□□□□ -0.65
DDX3X-222	ENST00000631641	KCNQ3	O43525	872 aa		10.96	□□□□□ -0.65
DDX3X-222	ENST00000631641	SNRPA1	P09661	255 aa	Known RBP	10.96	□□□□□ -0.65
DDX3X-222	ENST00000631641	PDE6B	P35913	854 aa		10.96	□□□□□ -0.65
DDX3X-222	ENST00000631641	WDR43	Q15061	677 aa	Known RBP eCLIP	10.96	□□□□□ -0.65
DDX3X-222	ENST00000631641	TBC1D9B	Q66K14	1250 aa		10.96	□□□□□ -0.65
DDX3X-222	ENST00000631641	MCM10	Q7L590	875 aa		10.96	□□□□□ -0.65
DDX3X-222	ENST00000631641	BRIP1	Q9BX63	1249 aa		10.96	□□□□□ -0.65
DDX3X-222	ENST00000631641	TBC1D2B	Q9UPU7	963 aa		10.96	□□□□□ -0.65
DDX3X-222	ENST00000631641	VIRMA	Q69YN4	1812 aa	Known RBP	10.95	□□□□□ -0.66
DDX3X-222	ENST00000631641	SIPA1L3	O60292	1781 aa	Predicted RBP	10.95	□□□□□ -0.66
DDX3X-222	ENST00000631641	SCN7A	Q01118	1682 aa		10.95	□□□□□ -0.66
DDX3X-222	ENST00000631641	NPHP1	O15259	732 aa		10.95	□□□□□ -0.66
DDX3X-222	ENST00000631641	CAMTA2	O94983	1202 aa		10.95	□□□□□ -0.66
DDX3X-222	ENST00000631641	A1BG	P04217	495 aa		10.95	□□□□□ -0.66
DDX3X-222	ENST00000631641	LMNB1	P20700	586 aa		10.95	□□□□□ -0.66
DDX3X-222	ENST00000631641	PRR5L	Q6MZQ0	368 aa		10.95	□□□□□ -0.66
DDX3X-222	ENST00000631641	DZIP3	Q86Y13	1208 aa	Known RBP	10.95	□□□□□ -0.66
DDX3X-222	ENST00000631641	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.95	□□□□□ -0.66
DDX3X-222	ENST00000631641	FAM9B	Q8IZU0	186 aa		10.95	□□□□□ -0.66
DDX3X-222	ENST00000631641	CNBD1	Q8NA66	436 aa		10.95	□□□□□ -0.66
DDX3X-222	ENST00000631641	SETDB2	Q96T68	719 aa		10.95	□□□□□ -0.66
DDX3X-222	ENST00000631641	NMRK2	Q9NPI5	230 aa		10.95	□□□□□ -0.66
DDX3X-222	ENST00000631641	RGL2	O15211	777 aa		10.94	□□□□□ -0.66
DDX3X-222	ENST00000631641	ST5	P78524	1137 aa		10.94	□□□□□ -0.66
DDX3X-222	ENST00000631641	RBM46	Q8TBY0	533 aa	Known RBP	10.94	□□□□□ -0.66
DDX3X-222	ENST00000631641	ZNF652	Q9Y2D9	606 aa		10.94	□□□□□ -0.66
DDX3X-222	ENST00000631641	APLP1	P51693	650 aa		10.93	□□□□□ -0.66
DDX3X-222	ENST00000631641	RASSF7	Q02833	373 aa		10.93	□□□□□ -0.66
DDX3X-222	ENST00000631641	DCTN1	Q14203	1278 aa		10.93	□□□□□ -0.66
DDX3X-222	ENST00000631641	TAF7	Q15545	349 aa	Predicted RBP	10.93	□□□□□ -0.66
DDX3X-222	ENST00000631641	CLEC4G	Q6UXB4	293 aa		10.93	□□□□□ -0.66
DDX3X-222	ENST00000631641	PNN	Q9H307	717 aa	Known RBP	10.93	□□□□□ -0.66
DDX3X-222	ENST00000631641	ADAMTS8	Q9UP79	889 aa		10.93	□□□□□ -0.66
DDX3X-222	ENST00000631641	USP16	Q9Y5T5	823 aa		10.93	□□□□□ -0.66
DDX3X-222	ENST00000631641	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.92	□□□□□ -0.66	8e-8	■■□□□ 12.3
DDX3X-222	ENST00000631641	AFDN	P55196	1824 aa	Known RBP	10.92	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms