RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 MAATS1Q7Z4T9 603 aa10.3□□□□□ -0.76
GABRB3-216ENST00000628124 ZNF444Q8N0Y2 327 aaPredicted RBP10.3□□□□□ -0.76
GABRB3-216ENST00000628124 RGS22Q8NE09 1264 aa10.3□□□□□ -0.76
GABRB3-216ENST00000628124 A0A1W2PRG0 241 aa10.3□□□□□ -0.76
GABRB3-216ENST00000628124 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
GABRB3-216ENST00000628124 STARD3NLO95772 234 aa10.3□□□□□ -0.76
GABRB3-216ENST00000628124 CCDC40Q4G0X9 1142 aa10.3□□□□□ -0.76
GABRB3-216ENST00000628124 CEP135Q66GS9 1140 aa10.3□□□□□ -0.76
GABRB3-216ENST00000628124 RAPGEF2Q9Y4G8 1499 aa10.3□□□□□ -0.76
GABRB3-216ENST00000628124 MAP7D1Q3KQU3 841 aa10.3□□□□□ -0.76
GABRB3-216ENST00000628124 TCP11L1Q9NUJ3 509 aa10.3□□□□□ -0.76
GABRB3-216ENST00000628124 CHMP4BP1P59074 171 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 CCDC96Q2M329 555 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 CCDC183Q5T5S1 534 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 KLHL10Q6JEL2 608 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 UTP14AQ9BVJ6 771 aaKnown RBP10.29□□□□□ -0.76
GABRB3-216ENST00000628124 PTPRGP23470 1445 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 STX6O43752 255 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 MXRA7P84157 204 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 CCDC14Q49A88 953 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 KANK3Q6NY19 840 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 CLIP2Q9UDT6 1046 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 ATP2A1O14983 1001 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 CCDC110Q8TBZ0 833 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 NOB1Q9ULX3 412 aaKnown RBP10.29□□□□□ -0.76
GABRB3-216ENST00000628124 PRC1O43663 620 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 C8orf76Q96K31 380 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 NAPBQ9H115 298 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 ABCF2Q9UG63 623 aa10.29□□□□□ -0.76
GABRB3-216ENST00000628124 HSF2BPO75031 334 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 CABP2Q9NPB3 220 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 RASAL2Q9UJF2 1139 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 ARL1P40616 181 aaPredicted RBP10.28□□□□□ -0.76
GABRB3-216ENST00000628124 MAP3K12Q12852 859 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 WDR78Q5VTH9 848 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 CWC27Q6UX04 472 aaKnown RBP10.28□□□□□ -0.76
GABRB3-216ENST00000628124 CHD1LQ86WJ1 897 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 RAB11FIP3O75154 756 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 GLRX3O76003 335 aaKnown RBP10.28□□□□□ -0.76
GABRB3-216ENST00000628124 CAVIN2O95810 425 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 PRPF4BQ13523 1007 aaKnown RBP10.28□□□□□ -0.76
GABRB3-216ENST00000628124 METTL24Q5JXM2 366 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 DNAAF4Q8WXU2 420 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 FYCO1Q9BQS8 1478 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 NOP2P46087 812 aaKnown RBP10.28□□□□□ -0.76
GABRB3-216ENST00000628124 LRSAM1Q6UWE0 723 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 WDR63Q8IWG1 891 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 FHOD3Q2V2M9 1422 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 TCERG1LQ5VWI1 586 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 DDX54Q8TDD1 881 aaKnown RBP10.28□□□□□ -0.76
GABRB3-216ENST00000628124 TBC1D5Q92609 795 aa10.28□□□□□ -0.76
GABRB3-216ENST00000628124 MAP3K9P80192 1104 aa10.27□□□□□ -0.76
GABRB3-216ENST00000628124 CNNM3Q8NE01 707 aa10.27□□□□□ -0.76
GABRB3-216ENST00000628124 PRKCSHP14314 528 aaPredicted RBP10.27□□□□□ -0.77
GABRB3-216ENST00000628124 CASTP20810 708 aaKnown RBP10.27□□□□□ -0.77
GABRB3-216ENST00000628124 SYCP3Q8IZU3 236 aa10.27□□□□□ -0.77
GABRB3-216ENST00000628124 GTPBP4Q9BZE4 634 aaKnown RBP10.27□□□□□ -0.77
GABRB3-216ENST00000628124 DDX19AQ9NUU7 478 aaKnown RBP10.27□□□□□ -0.77
GABRB3-216ENST00000628124 KIF5BP33176 963 aa10.27□□□□□ -0.77
GABRB3-216ENST00000628124 MCM4P33991 863 aa10.27□□□□□ -0.77
GABRB3-216ENST00000628124 TPD52P55327 224 aaPredicted RBP10.27□□□□□ -0.77
GABRB3-216ENST00000628124 TTLL12Q14166 644 aaPredicted RBP10.27□□□□□ -0.77
GABRB3-216ENST00000628124 C1orf115Q9H7X2 142 aa10.27□□□□□ -0.77
GABRB3-216ENST00000628124 IL27Q8NEV9 243 aa10.27□□□□□ -0.77
GABRB3-216ENST00000628124 KIF1BPQ96EK5 621 aa10.27□□□□□ -0.77
GABRB3-216ENST00000628124 PODXL2Q9NZ53 605 aa10.27□□□□□ -0.77
GABRB3-216ENST00000628124 SLC12A7Q9Y666 1083 aa10.27□□□□□ -0.77
GABRB3-216ENST00000628124 NLRP5P59047 1200 aa10.26□□□□□ -0.77
GABRB3-216ENST00000628124 SSRP1Q08945 709 aaKnown RBP10.26□□□□□ -0.77
GABRB3-216ENST00000628124 MYL6BP14649 208 aa10.26□□□□□ -0.77
GABRB3-216ENST00000628124 PPP4R3BQ5MIZ7 849 aa10.26□□□□□ -0.77
GABRB3-216ENST00000628124 CATIPQ7Z7H3 387 aa10.26□□□□□ -0.77
GABRB3-216ENST00000628124 SYNCQ9H7C4 482 aa10.26□□□□□ -0.77
GABRB3-216ENST00000628124 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.26□□□□□ -0.77
GABRB3-216ENST00000628124 MYOM3Q5VTT5 1437 aa10.26□□□□□ -0.77
GABRB3-216ENST00000628124 GMNNO75496 209 aa10.26□□□□□ -0.77
GABRB3-216ENST00000628124 DNA2P51530 1060 aa10.26□□□□□ -0.77
GABRB3-216ENST00000628124 SNX16P57768 344 aa10.26□□□□□ -0.77
GABRB3-216ENST00000628124 BRPF3Q9ULD4 1205 aa10.26□□□□□ -0.77
GABRB3-216ENST00000628124 ADAMTS8Q9UP79 889 aa10.26□□□□□ -0.77
GABRB3-216ENST00000628124 LDHCP07864 332 aa10.26□□□□□ -0.77
GABRB3-216ENST00000628124 MPNDQ8N594 471 aa10.26□□□□□ -0.77
GABRB3-216ENST00000628124 IPO4Q8TEX9 1081 aaKnown RBP10.26□□□□□ -0.77
GABRB3-216ENST00000628124 SELENOOQ9BVL4 669 aa10.26□□□□□ -0.77
GABRB3-216ENST00000628124 TNNT1P13805 278 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 ANKS4BQ8N8V4 417 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 ERMNQ8TAM6 284 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 PUF60Q9UHX1 559 aaKnown RBP10.25□□□□□ -0.77
GABRB3-216ENST00000628124 MINDY4BA8MYZ0 360 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 ALDH3A1P30838 453 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 PSMC4P43686 418 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 MNAT1P51948 309 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 RMND1Q9NWS8 449 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 CCDC160A6NGH7 325 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 TBCAO75347 108 aaKnown RBP10.25□□□□□ -0.77
GABRB3-216ENST00000628124 MVPQ14764 893 aaKnown RBP10.25□□□□□ -0.77
GABRB3-216ENST00000628124 SULT6B1Q6IMI4 303 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 CEP83Q9Y592 693 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 ZPR1O75312 459 aa10.25□□□□□ -0.77
GABRB3-216ENST00000628124 IVLP07476 585 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms