RNA–Protein interactions for RNA: ENST00000626422.2

MECP2-215, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-215ENST00000626422 KDM2BQ8NHM5 1336 aa17.13■□□□□ 0.33
MECP2-215ENST00000626422 CYP19A1P11511 503 aaPredicted RBP17.12■□□□□ 0.33
MECP2-215ENST00000626422 FSTL1Q12841 308 aa17.12■□□□□ 0.33
MECP2-215ENST00000626422 SLC39A6Q13433 755 aa17.12■□□□□ 0.33
MECP2-215ENST00000626422 COL13A1Q5TAT6 717 aaPredicted RBP17.12■□□□□ 0.33
MECP2-215ENST00000626422 SOS1Q07889 1333 aaPredicted RBP17.12■□□□□ 0.33
MECP2-215ENST00000626422 JMYQ8N9B5 988 aa17.11■□□□□ 0.33
MECP2-215ENST00000626422 SLC52A2Q9HAB3 445 aa17.11■□□□□ 0.33
MECP2-215ENST00000626422 BCL2L12Q9HB09 334 aa17.11■□□□□ 0.33
MECP2-215ENST00000626422 ZPR1O75312 459 aa17.1■□□□□ 0.33
MECP2-215ENST00000626422 EIF4G2P78344 907 aaKnown RBP eCLIP17.1■□□□□ 0.33
MECP2-215ENST00000626422 NFIXQ14938 502 aa17.1■□□□□ 0.33
MECP2-215ENST00000626422 AKAP4Q5JQC9 854 aa17.1■□□□□ 0.33
MECP2-215ENST00000626422 RNMTO43148 476 aaKnown RBP17.09■□□□□ 0.33
MECP2-215ENST00000626422 NARFQ9UHQ1 456 aa17.09■□□□□ 0.33
MECP2-215ENST00000626422 ZBTB1Q9Y2K1 713 aa17.09■□□□□ 0.33
MECP2-215ENST00000626422 TIAM2Q8IVF5 1701 aa17.09■□□□□ 0.33
MECP2-215ENST00000626422 UBR2Q8IWV8 1755 aa17.08■□□□□ 0.33
MECP2-215ENST00000626422 MRC1P22897 1456 aa17.08■□□□□ 0.32
MECP2-215ENST00000626422 ANKRD31Q8N7Z5 1873 aa17.07■□□□□ 0.32
MECP2-215ENST00000626422 COL15A1P39059 1388 aa17.07■□□□□ 0.32
MECP2-215ENST00000626422 CARMIL3Q8ND23 1372 aa17.07■□□□□ 0.32
MECP2-215ENST00000626422 SERPINB2P05120 415 aa17.07■□□□□ 0.32
MECP2-215ENST00000626422 HMOX1P09601 288 aa17.07■□□□□ 0.32
MECP2-215ENST00000626422 PCGF6Q9BYE7 350 aa17.06■□□□□ 0.32
MECP2-215ENST00000626422 LMNB1P20700 586 aa17.05■□□□□ 0.32
MECP2-215ENST00000626422 MTHFSDQ2M296 383 aaKnown RBP17.05■□□□□ 0.32
MECP2-215ENST00000626422 SMC1BQ8NDV3 1235 aa17.05■□□□□ 0.32
MECP2-215ENST00000626422 GLTPD2A6NH11 291 aa17.04■□□□□ 0.32
MECP2-215ENST00000626422 NFKBIEO00221 500 aa17.04■□□□□ 0.32
MECP2-215ENST00000626422 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
MECP2-215ENST00000626422 C2CD5Q86YS7 1000 aa17.04■□□□□ 0.32
MECP2-215ENST00000626422 KNSTRNQ9Y448 316 aa17.04■□□□□ 0.32
MECP2-215ENST00000626422 POTECB2RU33 542 aa17.03■□□□□ 0.32
MECP2-215ENST00000626422 CANXP27824 592 aaKnown RBP17.03■□□□□ 0.32
MECP2-215ENST00000626422 BICDL1Q6ZP65 573 aa17.03■□□□□ 0.32
MECP2-215ENST00000626422 TTLL6Q8N841 843 aa17.03■□□□□ 0.32
MECP2-215ENST00000626422 COL11A2P13942 1736 aaPredicted RBP17.03■□□□□ 0.32
MECP2-215ENST00000626422 DICER1Q9UPY3 1922 aaKnown RBP17.03■□□□□ 0.32
MECP2-215ENST00000626422 CACNA1SQ13698 1873 aa17.02■□□□□ 0.32
MECP2-215ENST00000626422 FER1L6Q2WGJ9 1857 aa17.02■□□□□ 0.32
MECP2-215ENST00000626422 VEGFAP15692 232 aaPredicted RBP17.02■□□□□ 0.32
MECP2-215ENST00000626422 CLSPNQ9HAW4 1339 aa17.01■□□□□ 0.31
MECP2-215ENST00000626422 ZC3H4Q9UPT8 1303 aaKnown RBP17.01■□□□□ 0.31
MECP2-215ENST00000626422 CAPN15O75808 1086 aa17.01■□□□□ 0.31
MECP2-215ENST00000626422 VSIG10Q8N0Z9 540 aa17.01■□□□□ 0.31
MECP2-215ENST00000626422 CCDC24Q8N4L8 307 aa17.01■□□□□ 0.31
MECP2-215ENST00000626422 SIPA1L3O60292 1781 aaPredicted RBP17.01■□□□□ 0.31
MECP2-215ENST00000626422 H0YIN7 160 aa17■□□□□ 0.31
MECP2-215ENST00000626422 EIF5P55010 431 aaKnown RBP17■□□□□ 0.31
MECP2-215ENST00000626422 TBC1D9BQ66K14 1250 aa17■□□□□ 0.31
MECP2-215ENST00000626422 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
MECP2-215ENST00000626422 SCN7AQ01118 1682 aa16.99■□□□□ 0.31
MECP2-215ENST00000626422 SLX4Q8IY92 1834 aa16.98■□□□□ 0.31
MECP2-215ENST00000626422 C21orf2O43822 256 aa16.97■□□□□ 0.31
MECP2-215ENST00000626422 DIAPH1O60610 1272 aaKnown RBP16.97■□□□□ 0.31
MECP2-215ENST00000626422 TNS4Q8IZW8 715 aa16.97■□□□□ 0.31
MECP2-215ENST00000626422 IL17REQ8NFR9 667 aa16.97■□□□□ 0.31
MECP2-215ENST00000626422 ZNF622Q969S3 477 aaKnown RBP eCLIP16.97■□□□□ 0.316e-14■□□□□ 8.7
MECP2-215ENST00000626422 ZNF496Q96IT1 587 aaPredicted RBP16.97■□□□□ 0.31
MECP2-215ENST00000626422 TBC1D2BQ9UPU7 963 aa16.97■□□□□ 0.31
MECP2-215ENST00000626422 PER1O15534 1290 aaPredicted RBP16.96■□□□□ 0.31
MECP2-215ENST00000626422 PRR5LQ6MZQ0 368 aa16.96■□□□□ 0.31
MECP2-215ENST00000626422 STARD3NLO95772 234 aa16.95■□□□□ 0.3
MECP2-215ENST00000626422 HSPA1AP0DMV8 641 aaKnown RBP16.95■□□□□ 0.3
MECP2-215ENST00000626422 HSPA1BP0DMV9 641 aaKnown RBP16.95■□□□□ 0.3
MECP2-215ENST00000626422 KIF7Q2M1P5 1343 aa16.95■□□□□ 0.3
MECP2-215ENST00000626422 HEG1Q9ULI3 1381 aa16.94■□□□□ 0.3
MECP2-215ENST00000626422 CC2D1BQ5T0F9 858 aaKnown RBP16.94■□□□□ 0.3
MECP2-215ENST00000626422 TTC5Q8N0Z6 440 aa16.94■□□□□ 0.3
MECP2-215ENST00000626422 BRIP1Q9BX63 1249 aa16.94■□□□□ 0.3
MECP2-215ENST00000626422 ZNF330Q9Y3S2 320 aaPredicted RBP16.94■□□□□ 0.3
MECP2-215ENST00000626422 COL3A1P02461 1466 aaPredicted RBP16.93■□□□□ 0.3
MECP2-215ENST00000626422 BCORQ6W2J9 1755 aa16.93■□□□□ 0.3
MECP2-215ENST00000626422 ARFGEF2Q9Y6D5 1785 aa16.93■□□□□ 0.3
MECP2-215ENST00000626422 A0A087WZG4 1122 aa16.93■□□□□ 0.3
MECP2-215ENST00000626422 A1BGP04217 495 aa16.93■□□□□ 0.3
MECP2-215ENST00000626422 POTEIP0CG38 1075 aa16.93■□□□□ 0.3
MECP2-215ENST00000626422 POTEJP0CG39 1038 aa16.93■□□□□ 0.3
MECP2-215ENST00000626422 ERFEQ4G0M1 354 aa16.93■□□□□ 0.3
MECP2-215ENST00000626422 DPY19L2Q6NUT2 758 aa16.93■□□□□ 0.3
MECP2-215ENST00000626422 ZNF790Q6PG37 636 aa16.93■□□□□ 0.3
MECP2-215ENST00000626422 KCNQ3O43525 872 aa16.92■□□□□ 0.3
MECP2-215ENST00000626422 PDE6BP35913 854 aa16.92■□□□□ 0.3
MECP2-215ENST00000626422 DDNO94850 711 aaPredicted RBP16.91■□□□□ 0.3
MECP2-215ENST00000626422 CAMTA2O94983 1202 aa16.91■□□□□ 0.3
MECP2-215ENST00000626422 IL6STP40189 918 aaPredicted RBP16.91■□□□□ 0.3
MECP2-215ENST00000626422 GNAT3A8MTJ3 354 aa16.9■□□□□ 0.3
MECP2-215ENST00000626422 PIP4K2AP48426 406 aaPredicted RBP16.9■□□□□ 0.3
MECP2-215ENST00000626422 TEFQ10587 303 aa16.9■□□□□ 0.3
MECP2-215ENST00000626422 CNGB1Q14028 1251 aaPredicted RBP16.9■□□□□ 0.3
MECP2-215ENST00000626422 U2SURPO15042 1029 aaKnown RBP16.89■□□□□ 0.29
MECP2-215ENST00000626422 TEX13AQ9BXU3 409 aaPredicted RBP16.89■□□□□ 0.29
MECP2-215ENST00000626422 MKRN1Q9UHC7 482 aaKnown RBP16.89■□□□□ 0.29
MECP2-215ENST00000626422 PDZRN3Q9UPQ7 1066 aa16.89■□□□□ 0.29
MECP2-215ENST00000626422 LTBP3Q9NS15 1303 aa16.89■□□□□ 0.29
MECP2-215ENST00000626422 PRAMEF22A3QJZ6 481 aa16.88■□□□□ 0.29
MECP2-215ENST00000626422 SRGNP10124 158 aa16.88■□□□□ 0.29
MECP2-215ENST00000626422 CHADLQ6NUI6 762 aa16.88■□□□□ 0.29
MECP2-215ENST00000626422 PHACTR3Q96KR7 559 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms