RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 SP7Q8TDD2 431 aaPredicted RBP6.11□□□□□ -1.43
CHD2-204ENST00000625463 DNAAF4Q8WXU2 420 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 PPM1EQ8WY54 764 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 GBP4Q96PP9 640 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 FMNL2Q96PY5 1086 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 RWDD1Q9H446 243 aaPredicted RBP6.11□□□□□ -1.43
CHD2-204ENST00000625463 TMOD4Q9NZQ9 345 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 BLOC1S6Q9UL45 172 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 TRAK1Q9UPV9 953 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 CCDC144AA2RUR9 1427 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 BICDL2A1A5D9 508 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 SPDYE16A6NNV3 312 aaPredicted RBP6.1□□□□□ -1.43
CHD2-204ENST00000625463 ZMYND10O75800 440 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 SLC4A3P48751 1232 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 MAP3K9P80192 1104 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 SFSWAPQ12872 951 aaKnown RBP6.1□□□□□ -1.43
CHD2-204ENST00000625463 PSMD2Q13200 908 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 FAM161AQ3B820 660 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 CCDC178Q5BJE1 867 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 MMS22LQ6ZRQ5 1243 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 FILIP1Q7Z7B0 1213 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 C10orf67Q8IYJ2 551 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 CCDC82Q8N4S0 544 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.1□□□□□ -1.43
CHD2-204ENST00000625463 GIMAP7Q8NHV1 300 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 FBXW7Q969H0 707 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 CCDC102AQ96A19 550 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 AK7Q96M32 723 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 SLX1AQ9BQ83 275 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 TRIM7Q9C029 511 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 PANK3Q9H999 370 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 GNL3LQ9NVN8 582 aaKnown RBP6.1□□□□□ -1.43
CHD2-204ENST00000625463 PUF60Q9UHX1 559 aaKnown RBP6.1□□□□□ -1.43
CHD2-204ENST00000625463 PDZRN3Q9UPQ7 1066 aa6.1□□□□□ -1.43
CHD2-204ENST00000625463 SPAG9O60271 1321 aaKnown RBP6.09□□□□□ -1.43
CHD2-204ENST00000625463 SGSM2O43147 1006 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 NEBLO76041 1014 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 SNUPNO95149 360 aaKnown RBP6.09□□□□□ -1.43
CHD2-204ENST00000625463 KCNA2P16389 499 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 ALDH1B1P30837 517 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 RPS6KA3P51812 740 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 CCDC15Q0P6D6 951 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 DDX10Q13206 875 aaKnown RBP6.09□□□□□ -1.43
CHD2-204ENST00000625463 PDIA5Q14554 519 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 SART3Q15020 963 aaKnown RBP6.09□□□□□ -1.43
CHD2-204ENST00000625463 ACBD5Q5T8D3 534 aaPredicted RBP6.09□□□□□ -1.43
CHD2-204ENST00000625463 SOGA3Q5TF21 947 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 HHATQ5VTY9 493 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 NUTM2GQ5VZR2 741 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 CCDC186Q7Z3E2 898 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 MYLK4Q86YV6 388 aaPredicted RBP6.09□□□□□ -1.43
CHD2-204ENST00000625463 ARMC2Q8NEN0 867 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 MIPOL1Q8TD10 442 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 OXER1Q8TDS5 423 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 MIEF2Q96C03 454 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 TRERF1Q96PN7 1200 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 UNC45AQ9H3U1 944 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 GPBP1L1Q9HC44 474 aaPredicted RBP6.09□□□□□ -1.43
CHD2-204ENST00000625463 POLKQ9UBT6 870 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 USP25Q9UHP3 1055 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 CTNNA3Q9UI47 895 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 WWC3Q9ULE0 1092 aa6.09□□□□□ -1.43
CHD2-204ENST00000625463 CTDP1Q9Y5B0 961 aaPredicted RBP6.09□□□□□ -1.43
CHD2-204ENST00000625463 KIAA1107Q9UPP5 1409 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 GRXCR2A6NFK2 248 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 CTIFO43310 598 aaKnown RBP6.08□□□□□ -1.44
CHD2-204ENST00000625463 MAP4K4O95819 1239 aaPredicted RBP6.08□□□□□ -1.44
CHD2-204ENST00000625463 CPP00450 1065 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 NUCB2P80303 420 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 POU5F1Q01860 360 aaKnown RBP6.08□□□□□ -1.44
CHD2-204ENST00000625463 ZRSR1Q15695 479 aaKnown RBP6.08□□□□□ -1.44
CHD2-204ENST00000625463 DBN1Q16643 649 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 ZNF394Q53GI3 561 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 RNF20Q5VTR2 975 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 SRLQ86TD4 932 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 GPIHBP1Q8IV16 184 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 HSCBQ8IWL3 235 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 TEX11Q8IYF3 940 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 MYOCDQ8IZQ8 938 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 MICALL1Q8N3F8 863 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 NBPF15Q8N660 670 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 RNF214Q8ND24 703 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 RSPH1Q8WYR4 309 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 PDLIM2Q96JY6 352 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 RSPH9Q9H1X1 276 aaPredicted RBP6.08□□□□□ -1.44
CHD2-204ENST00000625463 TRPV5Q9NQA5 729 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 CHMP5Q9NZZ3 219 aa6.08□□□□□ -1.44
CHD2-204ENST00000625463 VIRMAQ69YN4 1812 aaKnown RBP6.08□□□□□ -1.44
CHD2-204ENST00000625463 PLEKHG2Q9H7P9 1386 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 CGNL1Q0VF96 1302 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 ERLIN1O75477 346 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 WDHD1O75717 1129 aaPredicted RBP6.07□□□□□ -1.44
CHD2-204ENST00000625463 IVLP07476 585 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 BDNFP23560 247 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 STIP1P31948 543 aaKnown RBP6.07□□□□□ -1.44
CHD2-204ENST00000625463 TPM4P67936 248 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 GRIK3Q13003 919 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 CRYMQ14894 314 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 TAF7Q15545 349 aaPredicted RBP6.07□□□□□ -1.44
CHD2-204ENST00000625463 TSGA10IPQ3SY00 556 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms