RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 TMEM63CQ9P1W3 806 aa13.68□□□□□ -0.22
VARS2-213ENST00000625423 SRGAP3O43295 1099 aa13.68□□□□□ -0.22
VARS2-213ENST00000625423 RAB11FIP3O75154 756 aa13.68□□□□□ -0.22
VARS2-213ENST00000625423 EIF4A1P60842 406 aaKnown RBP13.68□□□□□ -0.22
VARS2-213ENST00000625423 NBPF6Q5VWK0 638 aa13.68□□□□□ -0.22
VARS2-213ENST00000625423 NBPF4Q96M43 638 aa13.68□□□□□ -0.22
VARS2-213ENST00000625423 CHPF2Q9P2E5 772 aa13.68□□□□□ -0.22
VARS2-213ENST00000625423 TUBGCP6Q96RT7 1819 aa13.68□□□□□ -0.22
VARS2-213ENST00000625423 ZBTB7CA1YPR0 619 aa13.68□□□□□ -0.22
VARS2-213ENST00000625423 KCNQ3O43525 872 aa13.67□□□□□ -0.22
VARS2-213ENST00000625423 PI4K2BQ8TCG2 481 aa13.67□□□□□ -0.22
VARS2-213ENST00000625423 INTS4Q96HW7 963 aaKnown RBP13.67□□□□□ -0.22
VARS2-213ENST00000625423 MARF1Q9Y4F3 1742 aaKnown RBP13.67□□□□□ -0.22
VARS2-213ENST00000625423 CEMIPQ8WUJ3 1361 aa13.67□□□□□ -0.22
VARS2-213ENST00000625423 PI4KAP2A4QPH2 592 aa13.67□□□□□ -0.22
VARS2-213ENST00000625423 ANXA1P04083 346 aa13.67□□□□□ -0.22
VARS2-213ENST00000625423 PI4KAP1Q8N8J0 262 aa13.67□□□□□ -0.22
VARS2-213ENST00000625423 IP6K1Q92551 441 aa13.67□□□□□ -0.22
VARS2-213ENST00000625423 PHF8Q9UPP1 1060 aa13.66□□□□□ -0.22
VARS2-213ENST00000625423 SYCE3A1L190 88 aa13.66□□□□□ -0.22
VARS2-213ENST00000625423 HSPA4P34932 840 aa13.66□□□□□ -0.22
VARS2-213ENST00000625423 DNAAF4Q8WXU2 420 aa13.66□□□□□ -0.22
VARS2-213ENST00000625423 BEND3Q5T5X7 828 aa13.66□□□□□ -0.22
VARS2-213ENST00000625423 KIF1BPQ96EK5 621 aa13.66□□□□□ -0.22
VARS2-213ENST00000625423 IL17RAQ96F46 866 aa13.66□□□□□ -0.22
VARS2-213ENST00000625423 FOXD4L6Q3SYB3 417 aaPredicted RBP13.65□□□□□ -0.22
VARS2-213ENST00000625423 FOXD4L3Q6VB84 417 aaPredicted RBP13.65□□□□□ -0.22
VARS2-213ENST00000625423 LRSAM1Q6UWE0 723 aa13.65□□□□□ -0.22
VARS2-213ENST00000625423 ZSCAN30Q86W11 494 aa13.65□□□□□ -0.22
VARS2-213ENST00000625423 CACNA1FO60840 1977 aa13.64□□□□□ -0.23
VARS2-213ENST00000625423 SGSM2O43147 1006 aa13.64□□□□□ -0.23
VARS2-213ENST00000625423 MBD3O95983 291 aa13.64□□□□□ -0.23
VARS2-213ENST00000625423 LRRC59Q96AG4 307 aaKnown RBP13.64□□□□□ -0.23
VARS2-213ENST00000625423 BTBD11A6QL63 1104 aa13.63□□□□□ -0.23
VARS2-213ENST00000625423 TEFQ10587 303 aa13.63□□□□□ -0.23
VARS2-213ENST00000625423 LMOD2Q6P5Q4 547 aa13.63□□□□□ -0.23
VARS2-213ENST00000625423 EPB41L2O43491 1005 aaKnown RBP13.63□□□□□ -0.23
VARS2-213ENST00000625423 HOXB7P09629 217 aa13.63□□□□□ -0.23
VARS2-213ENST00000625423 MPRIPQ6WCQ1 1025 aa13.63□□□□□ -0.23
VARS2-213ENST00000625423 CNTROBQ8N137 903 aa13.63□□□□□ -0.23
VARS2-213ENST00000625423 RAD50Q92878 1312 aa13.63□□□□□ -0.23
VARS2-213ENST00000625423 ZNF530Q6P9A1 599 aaPredicted RBP13.63□□□□□ -0.23
VARS2-213ENST00000625423 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
VARS2-213ENST00000625423 SNX14Q9Y5W7 946 aa13.63□□□□□ -0.23
VARS2-213ENST00000625423 N4BP2Q86UW6 1770 aaPredicted RBP13.63□□□□□ -0.23
VARS2-213ENST00000625423 MSNP26038 577 aaKnown RBP13.62□□□□□ -0.23
VARS2-213ENST00000625423 OS9Q13438 667 aaPredicted RBP13.62□□□□□ -0.23
VARS2-213ENST00000625423 CWC27Q6UX04 472 aaKnown RBP13.62□□□□□ -0.23
VARS2-213ENST00000625423 LSG1Q9H089 658 aaKnown RBP13.62□□□□□ -0.23
VARS2-213ENST00000625423 RASEFQ8IZ41 740 aa13.62□□□□□ -0.23
VARS2-213ENST00000625423 PDLIM2Q96JY6 352 aa13.62□□□□□ -0.23
VARS2-213ENST00000625423 LARP6Q9BRS8 491 aaKnown RBP13.62□□□□□ -0.23
VARS2-213ENST00000625423 ADCY9O60503 1353 aa13.61□□□□□ -0.23
VARS2-213ENST00000625423 PSME1Q06323 249 aa13.61□□□□□ -0.23
VARS2-213ENST00000625423 AKAP4Q5JQC9 854 aa13.61□□□□□ -0.23
VARS2-213ENST00000625423 SPG7Q9UQ90 795 aa13.61□□□□□ -0.23
VARS2-213ENST00000625423 USP54Q70EL1 1684 aa13.61□□□□□ -0.23
VARS2-213ENST00000625423 HSP90AB4PQ58FF6 505 aa13.61□□□□□ -0.23
VARS2-213ENST00000625423 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
VARS2-213ENST00000625423 ANKLE2Q86XL3 938 aa13.61□□□□□ -0.23
VARS2-213ENST00000625423 GADD45BO75293 160 aaPredicted RBP13.6□□□□□ -0.23
VARS2-213ENST00000625423 RNF214Q8ND24 703 aa13.6□□□□□ -0.23
VARS2-213ENST00000625423 WDR33Q9C0J8 1336 aaKnown RBP13.6□□□□□ -0.23
VARS2-213ENST00000625423 KIAA1211Q6ZU35 1233 aa13.6□□□□□ -0.23
VARS2-213ENST00000625423 CHMP4AQ9BY43 222 aa13.6□□□□□ -0.23
VARS2-213ENST00000625423 MED1Q15648 1581 aaPredicted RBP13.6□□□□□ -0.23
VARS2-213ENST00000625423 PLEKHO1Q53GL0 409 aaPredicted RBP13.6□□□□□ -0.23
VARS2-213ENST00000625423 TTC14Q96N46 770 aa13.6□□□□□ -0.23
VARS2-213ENST00000625423 LTN1O94822 1766 aa13.6□□□□□ -0.23
VARS2-213ENST00000625423 AK2P54819 239 aa13.59□□□□□ -0.23
VARS2-213ENST00000625423 USP48Q86UV5 1035 aa13.59□□□□□ -0.23
VARS2-213ENST00000625423 DBF4Q9UBU7 674 aaPredicted RBP13.59□□□□□ -0.23
VARS2-213ENST00000625423 MAP3K2Q9Y2U5 619 aa13.59□□□□□ -0.23
VARS2-213ENST00000625423 NFAT5O94916 1531 aa13.59□□□□□ -0.23
VARS2-213ENST00000625423 PROSER3Q2NL68 480 aa13.59□□□□□ -0.23
VARS2-213ENST00000625423 HS1BP3Q53T59 392 aa13.59□□□□□ -0.23
VARS2-213ENST00000625423 KCNH5Q8NCM2 988 aa13.59□□□□□ -0.23
VARS2-213ENST00000625423 SETD1BQ9UPS6 1966 aaKnown RBP13.59□□□□□ -0.23
VARS2-213ENST00000625423 GLRX3O76003 335 aaKnown RBP13.58□□□□□ -0.23
VARS2-213ENST00000625423 CPA1P15085 419 aa13.58□□□□□ -0.23
VARS2-213ENST00000625423 C9orf78Q9NZ63 289 aaPredicted RBP13.58□□□□□ -0.23
VARS2-213ENST00000625423 PA2G4Q9UQ80 394 aaKnown RBP13.58□□□□□ -0.23
VARS2-213ENST00000625423 RPAP1Q9BWH6 1393 aaPredicted RBP13.58□□□□□ -0.24
VARS2-213ENST00000625423 TTC41PQ6P2S7 1318 aa13.58□□□□□ -0.24
VARS2-213ENST00000625423 RNMTO43148 476 aaKnown RBP13.58□□□□□ -0.24
VARS2-213ENST00000625423 RUFY3Q7L099 469 aa13.58□□□□□ -0.24
VARS2-213ENST00000625423 CLASRPQ8N2M8 674 aaKnown RBP13.58□□□□□ -0.24
VARS2-213ENST00000625423 FER1L4A9Z1Z3 1794 aa13.58□□□□□ -0.24
VARS2-213ENST00000625423 USP42Q9H9J4 1324 aaKnown RBP13.58□□□□□ -0.24
VARS2-213ENST00000625423 PRAMEF22A3QJZ6 481 aa13.58□□□□□ -0.24
VARS2-213ENST00000625423 DIAPH3Q9NSV4 1193 aa13.58□□□□□ -0.24
VARS2-213ENST00000625423 MTX1Q13505 466 aa13.57□□□□□ -0.24
VARS2-213ENST00000625423 CWF19L2Q2TBE0 894 aaKnown RBP13.57□□□□□ -0.24
VARS2-213ENST00000625423 C1orf141Q5JVX7 400 aa13.57□□□□□ -0.24
VARS2-213ENST00000625423 NOL7Q9UMY1 257 aaKnown RBP13.57□□□□□ -0.24
VARS2-213ENST00000625423 SYAP1Q96A49 352 aaPredicted RBP13.57□□□□□ -0.24
VARS2-213ENST00000625423 TSPY26PQ9H489 355 aa13.57□□□□□ -0.24
VARS2-213ENST00000625423 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.57□□□□□ -0.24
VARS2-213ENST00000625423 LIMCH1Q9UPQ0 1083 aa13.57□□□□□ -0.24
VARS2-213ENST00000625423 GIGYF1O75420 1035 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms