RNA–Protein interactions for RNA: ENST00000623687.1

DUX4L28-201, Transcript of double homeobox 4 like 28, humanhuman

BASIC

Gene DUX4L28, Length 678 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4L28-201ENST00000623687 COL15A1P39059 1388 aa35.51■■■■□ 3.28
DUX4L28-201ENST00000623687 ZEB1P37275 1124 aaPredicted RBP35.51■■■■□ 3.28
DUX4L28-201ENST00000623687 NEFMP07197 916 aa35.5■■■■□ 3.27
DUX4L28-201ENST00000623687 FKBP8Q14318 412 aa35.5■■■■□ 3.27
DUX4L28-201ENST00000623687 FMNL2Q96PY5 1086 aa35.5■■■■□ 3.27
DUX4L28-201ENST00000623687 STARD3NLO95772 234 aa35.48■■■■□ 3.27
DUX4L28-201ENST00000623687 C10orf71Q711Q0 1435 aa35.48■■■■□ 3.27
DUX4L28-201ENST00000623687 CANXP27824 592 aaKnown RBP35.47■■■■□ 3.27
DUX4L28-201ENST00000623687 N4BP2Q86UW6 1770 aaPredicted RBP35.46■■■■□ 3.27
DUX4L28-201ENST00000623687 NFE2L2Q16236 605 aa35.46■■■■□ 3.27
DUX4L28-201ENST00000623687 TEX13AQ9BXU3 409 aaPredicted RBP35.46■■■■□ 3.27
DUX4L28-201ENST00000623687 USPL1Q5W0Q7 1092 aa35.45■■■■□ 3.27
DUX4L28-201ENST00000623687 PARP3Q9Y6F1 533 aa35.45■■■■□ 3.27
DUX4L28-201ENST00000623687 ZPR1O75312 459 aa35.44■■■■□ 3.26
DUX4L28-201ENST00000623687 PNNQ9H307 717 aaKnown RBP35.44■■■■□ 3.26
DUX4L28-201ENST00000623687 NARFQ9UHQ1 456 aa35.44■■■■□ 3.26
DUX4L28-201ENST00000623687 KDM3BQ7LBC6 1761 aa35.43■■■■□ 3.26
DUX4L28-201ENST00000623687 PXDNLA1KZ92 1463 aa35.43■■■■□ 3.26
DUX4L28-201ENST00000623687 MAPK8IP3Q9UPT6 1336 aa35.43■■■■□ 3.26
DUX4L28-201ENST00000623687 DDR1Q08345 913 aa35.43■■■■□ 3.26
DUX4L28-201ENST00000623687 EIF5P55010 431 aaKnown RBP35.42■■■■□ 3.26
DUX4L28-201ENST00000623687 PRKRIP1Q9H875 184 aaPredicted RBP35.41■■■■□ 3.26
DUX4L28-201ENST00000623687 TAF7Q15545 349 aaPredicted RBP35.4■■■■□ 3.26
DUX4L28-201ENST00000623687 BCL2L12Q9HB09 334 aa35.4■■■■□ 3.26
DUX4L28-201ENST00000623687 WWC3Q9ULE0 1092 aa35.4■■■■□ 3.26
DUX4L28-201ENST00000623687 SCN7AQ01118 1682 aa35.4■■■■□ 3.26
DUX4L28-201ENST00000623687 PRAMEF22A3QJZ6 481 aa35.39■■■■□ 3.26
DUX4L28-201ENST00000623687 GRIN3BO60391 1043 aa35.39■■■■□ 3.26
DUX4L28-201ENST00000623687 TM4SF1P30408 202 aa35.39■■■■□ 3.26
DUX4L28-201ENST00000623687 AFDNP55196 1824 aaKnown RBP35.39■■■■□ 3.26
DUX4L28-201ENST00000623687 MIS18AQ9NYP9 233 aa35.38■■■■□ 3.25
DUX4L28-201ENST00000623687 A1BGP04217 495 aa35.37■■■■□ 3.25
DUX4L28-201ENST00000623687 THUMPD2Q9BTF0 503 aaKnown RBP35.37■■■■□ 3.25
DUX4L28-201ENST00000623687 USP16Q9Y5T5 823 aa35.37■■■■□ 3.25
DUX4L28-201ENST00000623687 BRCA1P38398 1863 aaKnown RBP35.37■■■■□ 3.25
DUX4L28-201ENST00000623687 POLRMTO00411 1230 aaKnown RBP35.36■■■■□ 3.25
DUX4L28-201ENST00000623687 NRXN2Q9P2S2 1712 aa35.35■■■■□ 3.25
DUX4L28-201ENST00000623687 IL6STP40189 918 aaPredicted RBP35.35■■■■□ 3.25
DUX4L28-201ENST00000623687 TGFB2P61812 414 aa35.35■■■■□ 3.25
DUX4L28-201ENST00000623687 LAMB4A4D0S4 1761 aa35.35■■■■□ 3.25
DUX4L28-201ENST00000623687 SNRPA1P09661 255 aaKnown RBP35.34■■■■□ 3.25
DUX4L28-201ENST00000623687 A0A087WZG4 1122 aa35.33■■■■□ 3.25
DUX4L28-201ENST00000623687 NFIXQ14938 502 aa35.33■■■■□ 3.25
DUX4L28-201ENST00000623687 ZNF330Q9Y3S2 320 aaPredicted RBP35.33■■■■□ 3.25
DUX4L28-201ENST00000623687 A0A0G2JLW4 131 aa35.32■■■■□ 3.24
DUX4L28-201ENST00000623687 BCORQ6W2J9 1755 aa35.32■■■■□ 3.24
DUX4L28-201ENST00000623687 DPEP1P16444 411 aa35.3■■■■□ 3.24
DUX4L28-201ENST00000623687 PIP4K2AP48426 406 aaPredicted RBP35.3■■■■□ 3.24
DUX4L28-201ENST00000623687 ZNF784Q8NCA9 323 aaPredicted RBP35.3■■■■□ 3.24
DUX4L28-201ENST00000623687 CCDC146Q8IYE0 955 aa35.29■■■■□ 3.24
DUX4L28-201ENST00000623687 TBC1D2BQ9UPU7 963 aa35.29■■■■□ 3.24
DUX4L28-201ENST00000623687 TMPOP42166 694 aaKnown RBP35.28■■■■□ 3.24
DUX4L28-201ENST00000623687 RIPK4P57078 832 aa35.28■■■■□ 3.24
DUX4L28-201ENST00000623687 PNISRQ8TF01 805 aaKnown RBP35.28■■■■□ 3.24
DUX4L28-201ENST00000623687 WDR43Q15061 677 aaKnown RBP eCLIP35.27■■■■□ 3.24
DUX4L28-201ENST00000623687 KCNA3P22001 575 aa35.24■■■■□ 3.23
DUX4L28-201ENST00000623687 ADAMTS8Q9UP79 889 aa35.24■■■■□ 3.23
DUX4L28-201ENST00000623687 RRP7AQ9Y3A4 280 aaKnown RBP35.24■■■■□ 3.23
DUX4L28-201ENST00000623687 NBPF26B4DH59 902 aa35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 CAMTA2O94983 1202 aa35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 SERPINB2P05120 415 aa35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 EIF4A1P60842 406 aaKnown RBP35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 TBC1D9BQ66K14 1250 aa35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 NBPF10Q6P3W6 841 aaKnown RBP35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 BICDL1Q6ZP65 573 aa35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 NBPF15Q8N660 670 aa35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 ARFGEF1Q9Y6D6 1849 aa35.22■■■■□ 3.23
DUX4L28-201ENST00000623687 NPM2Q86SE8 214 aaKnown RBP35.21■■■■□ 3.23
DUX4L28-201ENST00000623687 RUNDC1Q96C34 613 aa35.21■■■■□ 3.23
DUX4L28-201ENST00000623687 BCS1LQ9Y276 419 aa35.21■■■■□ 3.23
DUX4L28-201ENST00000623687 GIGYF1O75420 1035 aaPredicted RBP35.2■■■■□ 3.23
DUX4L28-201ENST00000623687 DZIP3Q86Y13 1208 aaKnown RBP35.2■■■■□ 3.23
DUX4L28-201ENST00000623687 DLEC1Q9Y238 1755 aa35.18■■■■□ 3.22
DUX4L28-201ENST00000623687 CARMIL3Q8ND23 1372 aa35.18■■■■□ 3.22
DUX4L28-201ENST00000623687 CHRNA5P30532 468 aa35.18■■■■□ 3.22
DUX4L28-201ENST00000623687 LMOD3Q0VAK6 560 aa35.18■■■■□ 3.22
DUX4L28-201ENST00000623687 NEUROD2Q15784 382 aa35.18■■■■□ 3.22
DUX4L28-201ENST00000623687 ZNF316A6NFI3 1004 aaPredicted RBP35.17■■■■□ 3.22
DUX4L28-201ENST00000623687 ANKRD31Q8N7Z5 1873 aa35.17■■■■□ 3.22
DUX4L28-201ENST00000623687 TSPYL4Q9UJ04 414 aa35.16■■■■□ 3.22
DUX4L28-201ENST00000623687 PIM2Q9P1W9 311 aa35.15■■■■□ 3.22
DUX4L28-201ENST00000623687 TRIM35Q9UPQ4 493 aa35.14■■■■□ 3.22
DUX4L28-201ENST00000623687 ADCY9O60503 1353 aa35.11■■■■□ 3.21
DUX4L28-201ENST00000623687 BABAM1Q9NWV8 329 aa35.1■■■■□ 3.21
DUX4L28-201ENST00000623687 DALRD3Q5D0E6 543 aaKnown RBP35.09■■■■□ 3.21
DUX4L28-201ENST00000623687 SETDB2Q96T68 719 aa35.09■■■■□ 3.21
DUX4L28-201ENST00000623687 PRR5LQ6MZQ0 368 aa35.08■■■■□ 3.21
DUX4L28-201ENST00000623687 COL11A2P13942 1736 aaPredicted RBP35.08■■■■□ 3.21
DUX4L28-201ENST00000623687 ATP10DQ9P241 1426 aa35.07■■■■□ 3.21
DUX4L28-201ENST00000623687 CCDC184Q52MB2 194 aa35.07■■■■□ 3.2
DUX4L28-201ENST00000623687 CLEC4GQ6UXB4 293 aa35.07■■■■□ 3.2
DUX4L28-201ENST00000623687 CCDC24Q8N4L8 307 aa35.07■■■■□ 3.2
DUX4L28-201ENST00000623687 ARHGAP27Q6ZUM4 889 aa35.05■■■■□ 3.2
DUX4L28-201ENST00000623687 ZNF652Q9Y2D9 606 aa35.05■■■■□ 3.2
DUX4L28-201ENST00000623687 NUP98P52948 1817 aa35.04■■■■□ 3.2
DUX4L28-201ENST00000623687 C2CD5Q86YS7 1000 aa35.04■■■■□ 3.2
DUX4L28-201ENST00000623687 NGEFQ8N5V2 710 aa35.04■■■■□ 3.2
DUX4L28-201ENST00000623687 CHL1O00533 1208 aa35.02■■■■□ 3.2
DUX4L28-201ENST00000623687 RGL2O15211 777 aa35.02■■■■□ 3.2
DUX4L28-201ENST00000623687 MYL6BP14649 208 aa35.02■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms