RNA–Protein interactions for RNA: ENST00000623687.1

DUX4L28-201, Transcript of double homeobox 4 like 28, humanhuman

BASIC

Gene DUX4L28, Length 678 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4L28-201ENST00000623687 COL15A1P39059 1388 aa35.51■■■■□ 3.28
DUX4L28-201ENST00000623687 ZEB1P37275 1124 aaPredicted RBP35.51■■■■□ 3.28
DUX4L28-201ENST00000623687 NEFMP07197 916 aa35.5■■■■□ 3.27
DUX4L28-201ENST00000623687 FKBP8Q14318 412 aa35.5■■■■□ 3.27
DUX4L28-201ENST00000623687 FMNL2Q96PY5 1086 aa35.5■■■■□ 3.27
DUX4L28-201ENST00000623687 STARD3NLO95772 234 aa35.48■■■■□ 3.27
DUX4L28-201ENST00000623687 C10orf71Q711Q0 1435 aa35.48■■■■□ 3.27
DUX4L28-201ENST00000623687 CANXP27824 592 aaKnown RBP35.47■■■■□ 3.27
DUX4L28-201ENST00000623687 N4BP2Q86UW6 1770 aaPredicted RBP35.46■■■■□ 3.27
DUX4L28-201ENST00000623687 NFE2L2Q16236 605 aa35.46■■■■□ 3.27
DUX4L28-201ENST00000623687 TEX13AQ9BXU3 409 aaPredicted RBP35.46■■■■□ 3.27
DUX4L28-201ENST00000623687 USPL1Q5W0Q7 1092 aa35.45■■■■□ 3.27
DUX4L28-201ENST00000623687 PARP3Q9Y6F1 533 aa35.45■■■■□ 3.27
DUX4L28-201ENST00000623687 ZPR1O75312 459 aa35.44■■■■□ 3.26
DUX4L28-201ENST00000623687 PNNQ9H307 717 aaKnown RBP35.44■■■■□ 3.26
DUX4L28-201ENST00000623687 NARFQ9UHQ1 456 aa35.44■■■■□ 3.26
DUX4L28-201ENST00000623687 KDM3BQ7LBC6 1761 aa35.43■■■■□ 3.26
DUX4L28-201ENST00000623687 PXDNLA1KZ92 1463 aa35.43■■■■□ 3.26
DUX4L28-201ENST00000623687 MAPK8IP3Q9UPT6 1336 aa35.43■■■■□ 3.26
DUX4L28-201ENST00000623687 DDR1Q08345 913 aa35.43■■■■□ 3.26
DUX4L28-201ENST00000623687 EIF5P55010 431 aaKnown RBP35.42■■■■□ 3.26
DUX4L28-201ENST00000623687 PRKRIP1Q9H875 184 aaPredicted RBP35.41■■■■□ 3.26
DUX4L28-201ENST00000623687 TAF7Q15545 349 aaPredicted RBP35.4■■■■□ 3.26
DUX4L28-201ENST00000623687 BCL2L12Q9HB09 334 aa35.4■■■■□ 3.26
DUX4L28-201ENST00000623687 WWC3Q9ULE0 1092 aa35.4■■■■□ 3.26
DUX4L28-201ENST00000623687 SCN7AQ01118 1682 aa35.4■■■■□ 3.26
DUX4L28-201ENST00000623687 PRAMEF22A3QJZ6 481 aa35.39■■■■□ 3.26
DUX4L28-201ENST00000623687 GRIN3BO60391 1043 aa35.39■■■■□ 3.26
DUX4L28-201ENST00000623687 TM4SF1P30408 202 aa35.39■■■■□ 3.26
DUX4L28-201ENST00000623687 AFDNP55196 1824 aaKnown RBP35.39■■■■□ 3.26
DUX4L28-201ENST00000623687 MIS18AQ9NYP9 233 aa35.38■■■■□ 3.25
DUX4L28-201ENST00000623687 A1BGP04217 495 aa35.37■■■■□ 3.25
DUX4L28-201ENST00000623687 THUMPD2Q9BTF0 503 aaKnown RBP35.37■■■■□ 3.25
DUX4L28-201ENST00000623687 USP16Q9Y5T5 823 aa35.37■■■■□ 3.25
DUX4L28-201ENST00000623687 BRCA1P38398 1863 aaKnown RBP35.37■■■■□ 3.25
DUX4L28-201ENST00000623687 POLRMTO00411 1230 aaKnown RBP35.36■■■■□ 3.25
DUX4L28-201ENST00000623687 NRXN2Q9P2S2 1712 aa35.35■■■■□ 3.25
DUX4L28-201ENST00000623687 IL6STP40189 918 aaPredicted RBP35.35■■■■□ 3.25
DUX4L28-201ENST00000623687 TGFB2P61812 414 aa35.35■■■■□ 3.25
DUX4L28-201ENST00000623687 LAMB4A4D0S4 1761 aa35.35■■■■□ 3.25
DUX4L28-201ENST00000623687 SNRPA1P09661 255 aaKnown RBP35.34■■■■□ 3.25
DUX4L28-201ENST00000623687 A0A087WZG4 1122 aa35.33■■■■□ 3.25
DUX4L28-201ENST00000623687 NFIXQ14938 502 aa35.33■■■■□ 3.25
DUX4L28-201ENST00000623687 ZNF330Q9Y3S2 320 aaPredicted RBP35.33■■■■□ 3.25
DUX4L28-201ENST00000623687 A0A0G2JLW4 131 aa35.32■■■■□ 3.24
DUX4L28-201ENST00000623687 BCORQ6W2J9 1755 aa35.32■■■■□ 3.24
DUX4L28-201ENST00000623687 DPEP1P16444 411 aa35.3■■■■□ 3.24
DUX4L28-201ENST00000623687 PIP4K2AP48426 406 aaPredicted RBP35.3■■■■□ 3.24
DUX4L28-201ENST00000623687 ZNF784Q8NCA9 323 aaPredicted RBP35.3■■■■□ 3.24
DUX4L28-201ENST00000623687 CCDC146Q8IYE0 955 aa35.29■■■■□ 3.24
DUX4L28-201ENST00000623687 TBC1D2BQ9UPU7 963 aa35.29■■■■□ 3.24
DUX4L28-201ENST00000623687 TMPOP42166 694 aaKnown RBP35.28■■■■□ 3.24
DUX4L28-201ENST00000623687 RIPK4P57078 832 aa35.28■■■■□ 3.24
DUX4L28-201ENST00000623687 PNISRQ8TF01 805 aaKnown RBP35.28■■■■□ 3.24
DUX4L28-201ENST00000623687 WDR43Q15061 677 aaKnown RBP eCLIP35.27■■■■□ 3.24
DUX4L28-201ENST00000623687 KCNA3P22001 575 aa35.24■■■■□ 3.23
DUX4L28-201ENST00000623687 ADAMTS8Q9UP79 889 aa35.24■■■■□ 3.23
DUX4L28-201ENST00000623687 RRP7AQ9Y3A4 280 aaKnown RBP35.24■■■■□ 3.23
DUX4L28-201ENST00000623687 NBPF26B4DH59 902 aa35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 CAMTA2O94983 1202 aa35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 SERPINB2P05120 415 aa35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 EIF4A1P60842 406 aaKnown RBP35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 TBC1D9BQ66K14 1250 aa35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 NBPF10Q6P3W6 841 aaKnown RBP35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 BICDL1Q6ZP65 573 aa35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 NBPF15Q8N660 670 aa35.23■■■■□ 3.23
DUX4L28-201ENST00000623687 ARFGEF1Q9Y6D6 1849 aa35.22■■■■□ 3.23
DUX4L28-201ENST00000623687 NPM2Q86SE8 214 aaKnown RBP35.21■■■■□ 3.23
DUX4L28-201ENST00000623687 RUNDC1Q96C34 613 aa35.21■■■■□ 3.23
DUX4L28-201ENST00000623687 BCS1LQ9Y276 419 aa35.21■■■■□ 3.23
DUX4L28-201ENST00000623687 GIGYF1O75420 1035 aaPredicted RBP35.2■■■■□ 3.23
DUX4L28-201ENST00000623687 DZIP3Q86Y13 1208 aaKnown RBP35.2■■■■□ 3.23
DUX4L28-201ENST00000623687 DLEC1Q9Y238 1755 aa35.18■■■■□ 3.22
DUX4L28-201ENST00000623687 CARMIL3Q8ND23 1372 aa35.18■■■■□ 3.22
DUX4L28-201ENST00000623687 CHRNA5P30532 468 aa35.18■■■■□ 3.22
DUX4L28-201ENST00000623687 LMOD3Q0VAK6 560 aa35.18■■■■□ 3.22
DUX4L28-201ENST00000623687 NEUROD2Q15784 382 aa35.18■■■■□ 3.22
DUX4L28-201ENST00000623687 ZNF316A6NFI3 1004 aaPredicted RBP35.17■■■■□ 3.22
DUX4L28-201ENST00000623687 ANKRD31Q8N7Z5 1873 aa35.17■■■■□ 3.22
DUX4L28-201ENST00000623687 TSPYL4Q9UJ04 414 aa35.16■■■■□ 3.22
DUX4L28-201ENST00000623687 PIM2Q9P1W9 311 aa35.15■■■■□ 3.22
DUX4L28-201ENST00000623687 TRIM35Q9UPQ4 493 aa35.14■■■■□ 3.22
DUX4L28-201ENST00000623687 ADCY9O60503 1353 aa35.11■■■■□ 3.21
DUX4L28-201ENST00000623687 BABAM1Q9NWV8 329 aa35.1■■■■□ 3.21
DUX4L28-201ENST00000623687 DALRD3Q5D0E6 543 aaKnown RBP35.09■■■■□ 3.21
DUX4L28-201ENST00000623687 SETDB2Q96T68 719 aa35.09■■■■□ 3.21
DUX4L28-201ENST00000623687 PRR5LQ6MZQ0 368 aa35.08■■■■□ 3.21
DUX4L28-201ENST00000623687 COL11A2P13942 1736 aaPredicted RBP35.08■■■■□ 3.21
DUX4L28-201ENST00000623687 ATP10DQ9P241 1426 aa35.07■■■■□ 3.21
DUX4L28-201ENST00000623687 CCDC184Q52MB2 194 aa35.07■■■■□ 3.2
DUX4L28-201ENST00000623687 CLEC4GQ6UXB4 293 aa35.07■■■■□ 3.2
DUX4L28-201ENST00000623687 CCDC24Q8N4L8 307 aa35.07■■■■□ 3.2
DUX4L28-201ENST00000623687 ARHGAP27Q6ZUM4 889 aa35.05■■■■□ 3.2
DUX4L28-201ENST00000623687 ZNF652Q9Y2D9 606 aa35.05■■■■□ 3.2
DUX4L28-201ENST00000623687 NUP98P52948 1817 aa35.04■■■■□ 3.2
DUX4L28-201ENST00000623687 C2CD5Q86YS7 1000 aa35.04■■■■□ 3.2
DUX4L28-201ENST00000623687 NGEFQ8N5V2 710 aa35.04■■■■□ 3.2
DUX4L28-201ENST00000623687 CHL1O00533 1208 aa35.02■■■■□ 3.2
DUX4L28-201ENST00000623687 RGL2O15211 777 aa35.02■■■■□ 3.2
DUX4L28-201ENST00000623687 MYL6BP14649 208 aa35.02■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms