RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 PRAMEF22A3QJZ6 481 aa18.07■□□□□ 0.48
CLTCL1-212ENST00000622493 SEPT12Q8IYM1 358 aa18.07■□□□□ 0.48
CLTCL1-212ENST00000622493 TEX13AQ9BXU3 409 aaPredicted RBP18.07■□□□□ 0.48
CLTCL1-212ENST00000622493 ASAP1Q9ULH1 1129 aa18.07■□□□□ 0.48
CLTCL1-212ENST00000622493 LAMB4A4D0S4 1761 aa18.07■□□□□ 0.48
CLTCL1-212ENST00000622493 CHMP4BQ9H444 224 aaKnown RBP18.06■□□□□ 0.48
CLTCL1-212ENST00000622493 DDX21Q9NR30 783 aaKnown RBP eCLIP18.06■□□□□ 0.48
CLTCL1-212ENST00000622493 HYPKQ9NX55 129 aa18.06■□□□□ 0.48
CLTCL1-212ENST00000622493 ERBB4Q15303 1308 aa18.06■□□□□ 0.48
CLTCL1-212ENST00000622493 PTCD1O75127 700 aaKnown RBP18.06■□□□□ 0.48
CLTCL1-212ENST00000622493 RBM6P78332 1123 aaKnown RBP18.06■□□□□ 0.48
CLTCL1-212ENST00000622493 G2E3Q7L622 706 aa18.06■□□□□ 0.48
CLTCL1-212ENST00000622493 TMEM57Q8N5G2 664 aa18.06■□□□□ 0.48
CLTCL1-212ENST00000622493 USP16Q9Y5T5 823 aa18.06■□□□□ 0.48
CLTCL1-212ENST00000622493 RGS12O14924 1447 aa18.05■□□□□ 0.48
CLTCL1-212ENST00000622493 ITPRIPQ8IWB1 547 aa18.05■□□□□ 0.48
CLTCL1-212ENST00000622493 ACSBG1Q96GR2 724 aa18.05■□□□□ 0.48
CLTCL1-212ENST00000622493 FKBP5Q13451 457 aaPredicted RBP18.04■□□□□ 0.48
CLTCL1-212ENST00000622493 INTS3Q68E01 1043 aaKnown RBP18.04■□□□□ 0.48
CLTCL1-212ENST00000622493 CCDC136Q96JN2 1154 aa18.04■□□□□ 0.48
CLTCL1-212ENST00000622493 PDIA6Q15084 440 aa18.03■□□□□ 0.48
CLTCL1-212ENST00000622493 SMARCC1Q92922 1105 aaPredicted RBP18.03■□□□□ 0.48
CLTCL1-212ENST00000622493 PHAXQ9H814 394 aaKnown RBP18.03■□□□□ 0.48
CLTCL1-212ENST00000622493 RBM42Q9BTD8 480 aaKnown RBP18.01■□□□□ 0.47
CLTCL1-212ENST00000622493 STARD3NLO95772 234 aa18.01■□□□□ 0.47
CLTCL1-212ENST00000622493 CCT4P50991 539 aaKnown RBP18.01■□□□□ 0.47
CLTCL1-212ENST00000622493 B4GALNT3Q6L9W6 998 aa18.01■□□□□ 0.47
CLTCL1-212ENST00000622493 PXDNLA1KZ92 1463 aa18■□□□□ 0.47
CLTCL1-212ENST00000622493 KCNQ2O43526 872 aa18■□□□□ 0.47
CLTCL1-212ENST00000622493 DDX58O95786 925 aaKnown RBP18■□□□□ 0.47
CLTCL1-212ENST00000622493 PROSER3Q2NL68 480 aa18■□□□□ 0.47
CLTCL1-212ENST00000622493 NHSQ6T4R5 1651 aa17.99■□□□□ 0.47
CLTCL1-212ENST00000622493 ZBTB7BO15156 539 aaPredicted RBP17.99■□□□□ 0.47
CLTCL1-212ENST00000622493 ANXA1P04083 346 aa17.99■□□□□ 0.47
CLTCL1-212ENST00000622493 RXRBP28702 533 aa17.98■□□□□ 0.47
CLTCL1-212ENST00000622493 KRT27Q7Z3Y8 459 aa17.98■□□□□ 0.47
CLTCL1-212ENST00000622493 LRP10Q7Z4F1 713 aa17.98■□□□□ 0.47
CLTCL1-212ENST00000622493 ZBTB40Q9NUA8 1239 aa17.98■□□□□ 0.47
CLTCL1-212ENST00000622493 PALLDQ8WX93 1383 aa17.98■□□□□ 0.47
CLTCL1-212ENST00000622493 F6X3S4 739 aa17.98■□□□□ 0.47
CLTCL1-212ENST00000622493 KSR2Q6VAB6 950 aa17.98■□□□□ 0.47
CLTCL1-212ENST00000622493 DNAJC10Q8IXB1 793 aa17.98■□□□□ 0.47
CLTCL1-212ENST00000622493 CICQ96RK0 1608 aaPredicted RBP17.97■□□□□ 0.47
CLTCL1-212ENST00000622493 ZNF831Q5JPB2 1677 aa17.97■□□□□ 0.47
CLTCL1-212ENST00000622493 PI4KAP2A4QPH2 592 aa17.97■□□□□ 0.47
CLTCL1-212ENST00000622493 MYL6BP14649 208 aa17.97■□□□□ 0.47
CLTCL1-212ENST00000622493 SLC4A10Q6U841 1118 aa17.97■□□□□ 0.47
CLTCL1-212ENST00000622493 FAM196AQ6ZSG2 479 aa17.97■□□□□ 0.47
CLTCL1-212ENST00000622493 PI4KAP1Q8N8J0 262 aa17.97■□□□□ 0.47
CLTCL1-212ENST00000622493 SLC4A9Q96Q91 983 aa17.97■□□□□ 0.47
CLTCL1-212ENST00000622493 N4BP2Q86UW6 1770 aaPredicted RBP17.96■□□□□ 0.47
CLTCL1-212ENST00000622493 DNAAF4Q8WXU2 420 aa17.96■□□□□ 0.47
CLTCL1-212ENST00000622493 BRWD3Q6RI45 1802 aa17.96■□□□□ 0.47
CLTCL1-212ENST00000622493 SBF2Q86WG5 1849 aa17.96■□□□□ 0.47
CLTCL1-212ENST00000622493 LOC102724428A0A0B4J2F2 783 aa17.95■□□□□ 0.46
CLTCL1-212ENST00000622493 NBPF26B4DH59 902 aa17.95■□□□□ 0.46
CLTCL1-212ENST00000622493 SIK1P57059 783 aa17.95■□□□□ 0.46
CLTCL1-212ENST00000622493 NBPF14Q5TI25 921 aa17.95■□□□□ 0.46
CLTCL1-212ENST00000622493 NBPF10Q6P3W6 841 aaKnown RBP17.95■□□□□ 0.46
CLTCL1-212ENST00000622493 COPS6Q7L5N1 327 aa17.95■□□□□ 0.46
CLTCL1-212ENST00000622493 NBPF15Q8N660 670 aa17.95■□□□□ 0.46
CLTCL1-212ENST00000622493 ADCY9O60503 1353 aa17.95■□□□□ 0.46
CLTCL1-212ENST00000622493 ATP10DQ9P241 1426 aa17.95■□□□□ 0.46
CLTCL1-212ENST00000622493 A1BGP04217 495 aa17.95■□□□□ 0.46
CLTCL1-212ENST00000622493 CYP19A1P11511 503 aaPredicted RBP17.95■□□□□ 0.46
CLTCL1-212ENST00000622493 FAM182BQ5T319 152 aa17.95■□□□□ 0.46
CLTCL1-212ENST00000622493 XAGE3Q8WTP9 111 aa17.95■□□□□ 0.46
CLTCL1-212ENST00000622493 TJP1Q07157 1748 aa17.94■□□□□ 0.46
CLTCL1-212ENST00000622493 ATP6V1AP38606 617 aa17.94■□□□□ 0.46
CLTCL1-212ENST00000622493 AIMP1Q12904 312 aaKnown RBP17.94■□□□□ 0.46
CLTCL1-212ENST00000622493 ANKRD13DQ6ZTN6 518 aa17.94■□□□□ 0.46
CLTCL1-212ENST00000622493 RGS17Q9UGC6 210 aaPredicted RBP17.94■□□□□ 0.46
CLTCL1-212ENST00000622493 BTAF1O14981 1849 aa17.93■□□□□ 0.46
CLTCL1-212ENST00000622493 SRCIN1Q9C0H9 1055 aa17.93■□□□□ 0.46
CLTCL1-212ENST00000622493 BCL11BQ9C0K0 894 aaPredicted RBP17.93■□□□□ 0.46
CLTCL1-212ENST00000622493 MAP3K2Q9Y2U5 619 aa17.93■□□□□ 0.46
CLTCL1-212ENST00000622493 BEND3Q5T5X7 828 aa17.92■□□□□ 0.46
CLTCL1-212ENST00000622493 PIP4K2AP48426 406 aaPredicted RBP17.92■□□□□ 0.46
CLTCL1-212ENST00000622493 RIC3Q7Z5B4 369 aa17.92■□□□□ 0.46
CLTCL1-212ENST00000622493 PLBD2Q8NHP8 589 aa17.92■□□□□ 0.46
CLTCL1-212ENST00000622493 PCDHB15Q9Y5E8 787 aa17.92■□□□□ 0.46
CLTCL1-212ENST00000622493 IBTKQ9P2D0 1353 aaPredicted RBP17.92■□□□□ 0.46
CLTCL1-212ENST00000622493 ALDH1L1O75891 902 aa17.91■□□□□ 0.46
CLTCL1-212ENST00000622493 CENPQQ7L2Z9 268 aaPredicted RBP17.91■□□□□ 0.46
CLTCL1-212ENST00000622493 GNAI3P08754 354 aa17.9■□□□□ 0.46
CLTCL1-212ENST00000622493 NEXNQ0ZGT2 675 aa17.9■□□□□ 0.46
CLTCL1-212ENST00000622493 LINS1Q8NG48 757 aa17.9■□□□□ 0.46
CLTCL1-212ENST00000622493 KDM2BQ8NHM5 1336 aa17.89■□□□□ 0.46
CLTCL1-212ENST00000622493 PTF1AQ7RTS3 328 aa17.89■□□□□ 0.46
CLTCL1-212ENST00000622493 METTL22Q9BUU2 404 aaPredicted RBP17.89■□□□□ 0.46
CLTCL1-212ENST00000622493 RWDD1Q9H446 243 aaPredicted RBP17.89■□□□□ 0.46
CLTCL1-212ENST00000622493 IL6STP40189 918 aaPredicted RBP17.89■□□□□ 0.45
CLTCL1-212ENST00000622493 MEIS3Q99687 375 aa17.89■□□□□ 0.45
CLTCL1-212ENST00000622493 HDAC1Q13547 482 aaPredicted RBP17.88■□□□□ 0.45
CLTCL1-212ENST00000622493 ITPK1Q13572 414 aa17.88■□□□□ 0.45
CLTCL1-212ENST00000622493 POTEAQ6S8J7 498 aa17.88■□□□□ 0.45
CLTCL1-212ENST00000622493 NPM2Q86SE8 214 aaKnown RBP17.87■□□□□ 0.45
CLTCL1-212ENST00000622493 USP44Q9H0E7 712 aa17.87■□□□□ 0.45
CLTCL1-212ENST00000622493 CCDC87Q9NVE4 849 aa17.87■□□□□ 0.45
CLTCL1-212ENST00000622493 ZBTB1Q9Y2K1 713 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms