RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 PTMSP20962 102 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 CHMLP26374 656 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 CLCN1P35523 988 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 AMPHP49418 695 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 NLRP6P59044 892 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 EIF4A1P60842 406 aaKnown RBP3.98□□□□□ -1.77
U1.39-201ENST00000621562 CUL4AQ13619 759 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 KLHL40Q2TBA0 621 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 TSHZ3Q63HK5 1081 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 UNC5CLQ8IV45 518 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 THEMISQ8N1K5 641 aaPredicted RBP3.98□□□□□ -1.77
U1.39-201ENST00000621562 ZGPATQ8N5A5 531 aaKnown RBP3.98□□□□□ -1.77
U1.39-201ENST00000621562 USHBP1Q8N6Y0 703 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 PI4K2BQ8TCG2 481 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 IP6K1Q92551 441 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 GBP4Q96PP9 640 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 USP44Q9H0E7 712 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 GRPEL1Q9HAV7 217 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 FOXD4L1Q9NU39 408 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 PHF8Q9UPP1 1060 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 LRRFIP2Q9Y608 721 aaKnown RBP3.98□□□□□ -1.77
U1.39-201ENST00000621562 MEGF6O75095 1541 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 PLEKHG2Q9H7P9 1386 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 C1orf167Q5SNV9 1468 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 KCPQ6ZWJ8 1503 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 EPB41L2O43491 1005 aaKnown RBP3.97□□□□□ -1.77
U1.39-201ENST00000621562 KCNQ3O43525 872 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 EIF5BO60841 1220 aaKnown RBP3.97□□□□□ -1.77
U1.39-201ENST00000621562 PLEKHG5O94827 1062 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 REC8O95072 547 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 BRD1O95696 1058 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 GNAI3P08754 354 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 MX1P20591 662 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 ZNF445P59923 1031 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 ANAPC15P60006 121 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 FKBP5Q13451 457 aaPredicted RBP3.97□□□□□ -1.77
U1.39-201ENST00000621562 MTX1Q13505 466 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 TAF7Q15545 349 aaPredicted RBP3.97□□□□□ -1.77
U1.39-201ENST00000621562 SKOR2Q2VWA4 1001 aaPredicted RBP3.97□□□□□ -1.77
U1.39-201ENST00000621562 BEND3Q5T5X7 828 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 CCDC30Q5VVM6 783 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 NBPF6Q5VWK0 638 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 NUTM2GQ5VZR2 741 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 GPT2Q8TD30 523 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 RTF1Q92541 710 aaKnown RBP3.97□□□□□ -1.77
U1.39-201ENST00000621562 CHAMP1Q96JM3 812 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 NBPF4Q96M43 638 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 PPP1R9BQ96SB3 815 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 STK31Q9BXU1 1019 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 LRRCC1Q9C099 1032 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 PHAXQ9H814 394 aaKnown RBP3.97□□□□□ -1.77
U1.39-201ENST00000621562 RREB1Q92766 1687 aa3.97□□□□□ -1.77
U1.39-201ENST00000621562 RAD50Q92878 1312 aa3.96□□□□□ -1.77
U1.39-201ENST00000621562 DCCP43146 1447 aa3.96□□□□□ -1.77
U1.39-201ENST00000621562 CICQ96RK0 1608 aaPredicted RBP3.96□□□□□ -1.78
U1.39-201ENST00000621562 APBB1O00213 710 aa3.96□□□□□ -1.78
U1.39-201ENST00000621562 SGSM2O43147 1006 aa3.96□□□□□ -1.78
U1.39-201ENST00000621562 NUCB2P80303 420 aa3.96□□□□□ -1.78
U1.39-201ENST00000621562 PROSER3Q2NL68 480 aa3.96□□□□□ -1.78
U1.39-201ENST00000621562 HDGFL1Q5TGJ6 251 aa3.96□□□□□ -1.78
U1.39-201ENST00000621562 SLC4A10Q6U841 1118 aa3.96□□□□□ -1.78
U1.39-201ENST00000621562 ARHGEF25Q86VW2 580 aa3.96□□□□□ -1.78
U1.39-201ENST00000621562 KCNB2Q92953 911 aa3.96□□□□□ -1.78
U1.39-201ENST00000621562 LRRC59Q96AG4 307 aaKnown RBP3.96□□□□□ -1.78
U1.39-201ENST00000621562 TMX3Q96JJ7 454 aa3.96□□□□□ -1.78
U1.39-201ENST00000621562 PDLIM2Q96JY6 352 aa3.96□□□□□ -1.78
U1.39-201ENST00000621562 TTC14Q96N46 770 aa3.96□□□□□ -1.78
U1.39-201ENST00000621562 LSG1Q9H089 658 aaKnown RBP3.96□□□□□ -1.78
U1.39-201ENST00000621562 LGR6Q9HBX8 967 aa3.96□□□□□ -1.78
U1.39-201ENST00000621562 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.96□□□□□ -1.78
U1.39-201ENST00000621562 CHPF2Q9P2E5 772 aa3.96□□□□□ -1.78
U1.39-201ENST00000621562 NSFL1CQ9UNZ2 370 aaKnown RBP3.96□□□□□ -1.78
U1.39-201ENST00000621562 BCORQ6W2J9 1755 aa3.96□□□□□ -1.78
U1.39-201ENST00000621562 MYH14Q7Z406 1995 aaKnown RBP3.96□□□□□ -1.78
U1.39-201ENST00000621562 UTYO14607 1347 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 LRP5O75197 1615 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 MYH1P12882 1939 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 DLEC1Q9Y238 1755 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 ROBO1Q9Y6N7 1651 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 COL15A1P39059 1388 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 MED23Q9ULK4 1368 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 RNMTO43148 476 aaKnown RBP3.95□□□□□ -1.78
U1.39-201ENST00000621562 ST18O60284 1047 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 RAB11FIP3O75154 756 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 ANXA1P04083 346 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 NBPF7P0C2Y1 421 aaPredicted RBP3.95□□□□□ -1.78
U1.39-201ENST00000621562 UBTFL1P0CB47 393 aaPredicted RBP3.95□□□□□ -1.78
U1.39-201ENST00000621562 HSPA4P34932 840 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 ST3GAL1Q11201 340 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 PDIA6Q15084 440 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 ZSCAN23Q3MJ62 389 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 AKAP4Q5JQC9 854 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 ZNF530Q6P9A1 599 aaPredicted RBP3.95□□□□□ -1.78
U1.39-201ENST00000621562 LRP10Q7Z4F1 713 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 PPP1R42Q7Z4L9 355 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 ABTB2Q8N961 1025 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 TMEM87AQ8NBN3 555 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 RHPN1Q8TCX5 695 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 DNAAF4Q8WXU2 420 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 NECTIN2Q92692 538 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms