RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 LRRC59Q96AG4 307 aaKnown RBP12.91□□□□□ -0.34
CDH1-214ENST00000621016 LGR6Q9HBX8 967 aa12.91□□□□□ -0.34
CDH1-214ENST00000621016 NSFL1CQ9UNZ2 370 aaKnown RBP12.91□□□□□ -0.34
CDH1-214ENST00000621016 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
CDH1-214ENST00000621016 SRGAP3O43295 1099 aa12.91□□□□□ -0.34
CDH1-214ENST00000621016 CPA1P15085 419 aa12.91□□□□□ -0.34
CDH1-214ENST00000621016 PLCB2Q00722 1185 aa12.91□□□□□ -0.34
CDH1-214ENST00000621016 AIMP1Q12904 312 aaKnown RBP12.91□□□□□ -0.34
CDH1-214ENST00000621016 ZNF710Q8N1W2 664 aa12.91□□□□□ -0.34
CDH1-214ENST00000621016 TMX3Q96JJ7 454 aa12.91□□□□□ -0.34
CDH1-214ENST00000621016 CCDC9Q9Y3X0 531 aaKnown RBP12.91□□□□□ -0.34
CDH1-214ENST00000621016 KCNA6P17658 529 aa12.91□□□□□ -0.34
CDH1-214ENST00000621016 NUCB2P80303 420 aa12.91□□□□□ -0.34
CDH1-214ENST00000621016 C17orf53Q8N3J3 647 aaPredicted RBP12.9□□□□□ -0.34
CDH1-214ENST00000621016 SPG7Q9UQ90 795 aa12.9□□□□□ -0.34
CDH1-214ENST00000621016 CLTCQ00610 1675 aaKnown RBP12.9□□□□□ -0.34
CDH1-214ENST00000621016 TMEM2Q9UHN6 1383 aa12.9□□□□□ -0.34
CDH1-214ENST00000621016 PTMAP06454 111 aaKnown RBP12.9□□□□□ -0.34
CDH1-214ENST00000621016 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.34
CDH1-214ENST00000621016 TAF7Q15545 349 aaPredicted RBP12.9□□□□□ -0.34
CDH1-214ENST00000621016 SASS6Q6UVJ0 657 aa12.9□□□□□ -0.34
CDH1-214ENST00000621016 CWC27Q6UX04 472 aaKnown RBP12.9□□□□□ -0.34
CDH1-214ENST00000621016 PPP1R42Q7Z4L9 355 aa12.9□□□□□ -0.34
CDH1-214ENST00000621016 IL25Q9H293 177 aa12.9□□□□□ -0.34
CDH1-214ENST00000621016 ATP10DQ9P241 1426 aa12.9□□□□□ -0.34
CDH1-214ENST00000621016 NBPF7P0C2Y1 421 aaPredicted RBP12.9□□□□□ -0.35
CDH1-214ENST00000621016 RICTORQ6R327 1708 aa12.89□□□□□ -0.35
CDH1-214ENST00000621016 TNNT1P13805 278 aa12.89□□□□□ -0.35
CDH1-214ENST00000621016 FAM193AP78312 1265 aa12.89□□□□□ -0.35
CDH1-214ENST00000621016 ZSCAN23Q3MJ62 389 aa12.89□□□□□ -0.35
CDH1-214ENST00000621016 PI4KAP2A4QPH2 592 aa12.89□□□□□ -0.35
CDH1-214ENST00000621016 GNAI3P08754 354 aa12.89□□□□□ -0.35
CDH1-214ENST00000621016 PI4KAP1Q8N8J0 262 aa12.89□□□□□ -0.35
CDH1-214ENST00000621016 PLEKHG3A1L390 1219 aa12.88□□□□□ -0.35
CDH1-214ENST00000621016 ESCO1Q5FWF5 840 aa12.88□□□□□ -0.35
CDH1-214ENST00000621016 ESYT1Q9BSJ8 1104 aa12.88□□□□□ -0.35
CDH1-214ENST00000621016 USP44Q9H0E7 712 aa12.88□□□□□ -0.35
CDH1-214ENST00000621016 CHPF2Q9P2E5 772 aa12.88□□□□□ -0.35
CDH1-214ENST00000621016 ZDHHC9Q9Y397 364 aa12.88□□□□□ -0.35
CDH1-214ENST00000621016 MCCP23508 829 aa12.88□□□□□ -0.35
CDH1-214ENST00000621016 LMBRD1Q9NUN5 540 aa12.88□□□□□ -0.35
CDH1-214ENST00000621016 CHMP3Q9Y3E7 222 aa12.88□□□□□ -0.35
CDH1-214ENST00000621016 HOXC9P31274 260 aa12.88□□□□□ -0.35
CDH1-214ENST00000621016 KLHL40Q2TBA0 621 aa12.88□□□□□ -0.35
CDH1-214ENST00000621016 PPP6R1Q9UPN7 881 aa12.88□□□□□ -0.35
CDH1-214ENST00000621016 SETD1BQ9UPS6 1966 aaKnown RBP12.88□□□□□ -0.35
CDH1-214ENST00000621016 TEFQ10587 303 aa12.87□□□□□ -0.35
CDH1-214ENST00000621016 GPT2Q8TD30 523 aa12.87□□□□□ -0.35
CDH1-214ENST00000621016 RBSNQ9H1K0 784 aa12.87□□□□□ -0.35
CDH1-214ENST00000621016 RGS12O14924 1447 aa12.87□□□□□ -0.35
CDH1-214ENST00000621016 PSME1Q06323 249 aa12.87□□□□□ -0.35
CDH1-214ENST00000621016 DNAJC2Q99543 621 aaKnown RBP12.87□□□□□ -0.35
CDH1-214ENST00000621016 CHMLP26374 656 aa12.87□□□□□ -0.35
CDH1-214ENST00000621016 PA2G4Q9UQ80 394 aaKnown RBP12.87□□□□□ -0.35
CDH1-214ENST00000621016 USP6P35125 1406 aa12.86□□□□□ -0.35
CDH1-214ENST00000621016 NCOA3Q9Y6Q9 1424 aa12.86□□□□□ -0.35
CDH1-214ENST00000621016 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
CDH1-214ENST00000621016 PIP4K2AP48426 406 aaPredicted RBP12.86□□□□□ -0.35
CDH1-214ENST00000621016 PDCL2Q8N4E4 241 aa12.86□□□□□ -0.35
CDH1-214ENST00000621016 SIL1Q9H173 461 aa12.86□□□□□ -0.35
CDH1-214ENST00000621016 TOMM22Q9NS69 142 aa12.86□□□□□ -0.35
CDH1-214ENST00000621016 PRAMEF22A3QJZ6 481 aa12.86□□□□□ -0.35
CDH1-214ENST00000621016 ATP8B2P98198 1209 aa12.86□□□□□ -0.35
CDH1-214ENST00000621016 SRCIN1Q9C0H9 1055 aa12.86□□□□□ -0.35
CDH1-214ENST00000621016 KIF20BQ96Q89 1820 aa12.86□□□□□ -0.35
CDH1-214ENST00000621016 FLT4P35916 1363 aa12.85□□□□□ -0.35
CDH1-214ENST00000621016 CAPN2P17655 700 aa12.85□□□□□ -0.35
CDH1-214ENST00000621016 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.85□□□□□ -0.35
CDH1-214ENST00000621016 NBPF6Q5VWK0 638 aa12.85□□□□□ -0.35
CDH1-214ENST00000621016 NBPF4Q96M43 638 aa12.85□□□□□ -0.35
CDH1-214ENST00000621016 C9orf78Q9NZ63 289 aaPredicted RBP12.85□□□□□ -0.35
CDH1-214ENST00000621016 TMEM63CQ9P1W3 806 aa12.85□□□□□ -0.35
CDH1-214ENST00000621016 CRB1P82279 1406 aa12.85□□□□□ -0.35
CDH1-214ENST00000621016 TERF1P54274 439 aa12.84□□□□□ -0.35
CDH1-214ENST00000621016 CWF19L2Q2TBE0 894 aaKnown RBP12.84□□□□□ -0.35
CDH1-214ENST00000621016 ZNF530Q6P9A1 599 aaPredicted RBP12.84□□□□□ -0.35
CDH1-214ENST00000621016 KIAA0232Q92628 1395 aa12.84□□□□□ -0.35
CDH1-214ENST00000621016 TAF3Q5VWG9 929 aa12.83□□□□□ -0.35
CDH1-214ENST00000621016 GPATCH11Q8N954 259 aa12.83□□□□□ -0.35
CDH1-214ENST00000621016 TCEANC2Q96MN5 208 aa12.83□□□□□ -0.35
CDH1-214ENST00000621016 GADD45BO75293 160 aaPredicted RBP12.83□□□□□ -0.36
CDH1-214ENST00000621016 TAOK2Q9UL54 1235 aa12.83□□□□□ -0.36
CDH1-214ENST00000621016 SOS1Q07889 1333 aaPredicted RBP12.83□□□□□ -0.36
CDH1-214ENST00000621016 DLC1Q96QB1 1528 aa12.83□□□□□ -0.36
CDH1-214ENST00000621016 BTBD11A6QL63 1104 aa12.83□□□□□ -0.36
CDH1-214ENST00000621016 RHPN1Q8TCX5 695 aa12.83□□□□□ -0.36
CDH1-214ENST00000621016 CWC22Q9HCG8 908 aaKnown RBP12.83□□□□□ -0.36
CDH1-214ENST00000621016 MYL6BP14649 208 aa12.82□□□□□ -0.36
CDH1-214ENST00000621016 KLHDC4Q8TBB5 520 aa12.82□□□□□ -0.36
CDH1-214ENST00000621016 NOL7Q9UMY1 257 aaKnown RBP12.82□□□□□ -0.36
CDH1-214ENST00000621016 DLG5Q8TDM6 1919 aa12.82□□□□□ -0.36
CDH1-214ENST00000621016 FIBPO43427 364 aa12.82□□□□□ -0.36
CDH1-214ENST00000621016 TIGD1Q96MW7 591 aa12.82□□□□□ -0.36
CDH1-214ENST00000621016 PTMSP20962 102 aa12.81□□□□□ -0.36
CDH1-214ENST00000621016 PROSER3Q2NL68 480 aa12.81□□□□□ -0.36
CDH1-214ENST00000621016 SBNO1A3KN83 1393 aa12.81□□□□□ -0.36
CDH1-214ENST00000621016 KNDC1Q76NI1 1749 aa12.81□□□□□ -0.36
CDH1-214ENST00000621016 ADAMTS13Q76LX8 1427 aa12.81□□□□□ -0.36
CDH1-214ENST00000621016 PTPRUQ92729 1446 aa12.81□□□□□ -0.36
CDH1-214ENST00000621016 IGSF1Q8N6C5 1336 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms