RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 KIF7Q2M1P5 1343 aa9.02□□□□□ -0.97
BRCC3-209ENST00000620502 SPATA31A1Q5TZJ5 1347 aa9.02□□□□□ -0.97
BRCC3-209ENST00000620502 COL5A2P05997 1499 aaPredicted RBP9.02□□□□□ -0.97
BRCC3-209ENST00000620502 ZBTB7CA1YPR0 619 aa9.01□□□□□ -0.97
BRCC3-209ENST00000620502 NBPF26B4DH59 902 aa9.01□□□□□ -0.97
BRCC3-209ENST00000620502 FBLN1P23142 703 aa9.01□□□□□ -0.97
BRCC3-209ENST00000620502 EVA1CP58658 441 aa9.01□□□□□ -0.97
BRCC3-209ENST00000620502 LARP1Q6PKG0 1096 aaKnown RBP9.01□□□□□ -0.97
BRCC3-209ENST00000620502 NSD3Q9BZ95 1437 aa9.01□□□□□ -0.97
BRCC3-209ENST00000620502 GGNBP2Q9H3C7 697 aa9.01□□□□□ -0.97
BRCC3-209ENST00000620502 CCDC9Q9Y3X0 531 aaKnown RBP9.01□□□□□ -0.97
BRCC3-209ENST00000620502 SMAPO00193 183 aa9□□□□□ -0.97
BRCC3-209ENST00000620502 FAM98CQ17RN3 349 aaKnown RBP9□□□□□ -0.97
BRCC3-209ENST00000620502 NUDT18Q6ZVK8 323 aa9□□□□□ -0.97
BRCC3-209ENST00000620502 SEPT12Q8IYM1 358 aa9□□□□□ -0.97
BRCC3-209ENST00000620502 COG3Q96JB2 828 aa9□□□□□ -0.97
BRCC3-209ENST00000620502 PANK3Q9H999 370 aa9□□□□□ -0.97
BRCC3-209ENST00000620502 PNMA3Q9UL41 463 aa9□□□□□ -0.97
BRCC3-209ENST00000620502 THSD7AQ9UPZ6 1657 aa9□□□□□ -0.97
BRCC3-209ENST00000620502 ABCC6O95255 1503 aa9□□□□□ -0.97
BRCC3-209ENST00000620502 EYA1Q99502 592 aa8.99□□□□□ -0.97
BRCC3-209ENST00000620502 ADGRG1Q9Y653 693 aa8.99□□□□□ -0.97
BRCC3-209ENST00000620502 WASHC2AQ641Q2 1341 aa8.99□□□□□ -0.97
BRCC3-209ENST00000620502 CRB1P82279 1406 aa8.98□□□□□ -0.97
BRCC3-209ENST00000620502 ANKRD26Q9UPS8 1709 aa8.98□□□□□ -0.97
BRCC3-209ENST00000620502 BARGINQ6ZT62 677 aa8.98□□□□□ -0.97
BRCC3-209ENST00000620502 ZFRQ96KR1 1074 aaKnown RBP8.98□□□□□ -0.97
BRCC3-209ENST00000620502 USP35Q9P2H5 1018 aa8.98□□□□□ -0.97
BRCC3-209ENST00000620502 MAP3K19Q56UN5 1328 aa8.98□□□□□ -0.97
BRCC3-209ENST00000620502 WDR17Q8IZU2 1322 aa8.98□□□□□ -0.97
BRCC3-209ENST00000620502 CCDC7Q96M83 1385 aa8.98□□□□□ -0.97
BRCC3-209ENST00000620502 TCP11L2Q8N4U5 519 aa8.97□□□□□ -0.97
BRCC3-209ENST00000620502 IP6K1Q92551 441 aa8.97□□□□□ -0.97
BRCC3-209ENST00000620502 WNT2BQ93097 391 aa8.97□□□□□ -0.97
BRCC3-209ENST00000620502 KCTD12Q96CX2 325 aaKnown RBP8.97□□□□□ -0.97
BRCC3-209ENST00000620502 THRAP3Q9Y2W1 955 aaKnown RBP8.97□□□□□ -0.97
BRCC3-209ENST00000620502 CGNL1Q0VF96 1302 aa8.97□□□□□ -0.97
BRCC3-209ENST00000620502 PEAK1Q9H792 1746 aa8.97□□□□□ -0.97
BRCC3-209ENST00000620502 WNK3Q9BYP7 1800 aa8.96□□□□□ -0.97
BRCC3-209ENST00000620502 GOLGA8CPA6NN73 597 aa8.96□□□□□ -0.98
BRCC3-209ENST00000620502 PER1O15534 1290 aaPredicted RBP8.96□□□□□ -0.98
BRCC3-209ENST00000620502 RRS1Q15050 365 aaKnown RBP8.96□□□□□ -0.98
BRCC3-209ENST00000620502 FAM161AQ3B820 660 aa8.96□□□□□ -0.98
BRCC3-209ENST00000620502 TOM1L2Q6ZVM7 507 aa8.96□□□□□ -0.98
BRCC3-209ENST00000620502 ZC3H15Q8WU90 426 aaKnown RBP8.96□□□□□ -0.98
BRCC3-209ENST00000620502 MAP2P11137 1827 aaKnown RBP8.96□□□□□ -0.98
BRCC3-209ENST00000620502 BLMP54132 1417 aaPredicted RBP8.96□□□□□ -0.98
BRCC3-209ENST00000620502 PARP4Q9UKK3 1724 aaKnown RBP8.95□□□□□ -0.98
BRCC3-209ENST00000620502 HOXC9P31274 260 aa8.95□□□□□ -0.98
BRCC3-209ENST00000620502 KRT27Q7Z3Y8 459 aa8.95□□□□□ -0.98
BRCC3-209ENST00000620502 ANKRD24Q8TF21 1146 aa8.95□□□□□ -0.98
BRCC3-209ENST00000620502 CARD10Q9BWT7 1032 aa8.95□□□□□ -0.98
BRCC3-209ENST00000620502 RGPD2P0DJD1 1756 aa8.94□□□□□ -0.98
BRCC3-209ENST00000620502 A0A0G2JS52 829 aa8.94□□□□□ -0.98
BRCC3-209ENST00000620502 CSB-PGBD3P0DP91 1061 aa8.94□□□□□ -0.98
BRCC3-209ENST00000620502 AMPHP49418 695 aa8.94□□□□□ -0.98
BRCC3-209ENST00000620502 MYT1Q01538 1121 aa8.94□□□□□ -0.98
BRCC3-209ENST00000620502 THSD4Q6ZMP0 1018 aa8.94□□□□□ -0.98
BRCC3-209ENST00000620502 ANKK1Q8NFD2 765 aa8.94□□□□□ -0.98
BRCC3-209ENST00000620502 RBM46Q8TBY0 533 aaKnown RBP8.94□□□□□ -0.98
BRCC3-209ENST00000620502 RTL1A6NKG5 1358 aa8.94□□□□□ -0.98
BRCC3-209ENST00000620502 ZMYND10O75800 440 aa8.93□□□□□ -0.98
BRCC3-209ENST00000620502 MAP2K5Q13163 448 aa8.93□□□□□ -0.98
BRCC3-209ENST00000620502 HSP90AB2PQ58FF8 381 aa8.93□□□□□ -0.98
BRCC3-209ENST00000620502 FAM182BQ5T319 152 aa8.93□□□□□ -0.98
BRCC3-209ENST00000620502 PXYLP1Q8TE99 480 aa8.93□□□□□ -0.98
BRCC3-209ENST00000620502 POLKQ9UBT6 870 aa8.93□□□□□ -0.98
BRCC3-209ENST00000620502 KNSTRNQ9Y448 316 aa8.93□□□□□ -0.98
BRCC3-209ENST00000620502 EMILIN1Q9Y6C2 1016 aa8.93□□□□□ -0.98
BRCC3-209ENST00000620502 NSD2O96028 1365 aa8.93□□□□□ -0.98
BRCC3-209ENST00000620502 KIF24Q5T7B8 1368 aa8.93□□□□□ -0.98
BRCC3-209ENST00000620502 DISP2A7MBM2 1401 aa8.93□□□□□ -0.98
BRCC3-209ENST00000620502 LRRC37A3O60309 1634 aa8.93□□□□□ -0.98
BRCC3-209ENST00000620502 FAM208AQ9UK61 1670 aaKnown RBP8.93□□□□□ -0.98
BRCC3-209ENST00000620502 INSRP06213 1382 aa8.92□□□□□ -0.98
BRCC3-209ENST00000620502 SOWAHBA6NEL2 793 aa8.92□□□□□ -0.98
BRCC3-209ENST00000620502 OATP04181 439 aa8.92□□□□□ -0.98
BRCC3-209ENST00000620502 METTL3Q86U44 580 aaKnown RBP8.92□□□□□ -0.98
BRCC3-209ENST00000620502 LTV1Q96GA3 475 aaPredicted RBP8.92□□□□□ -0.98
BRCC3-209ENST00000620502 NLRP2Q9NX02 1062 aa8.92□□□□□ -0.98
BRCC3-209ENST00000620502 FLT4P35916 1363 aa8.91□□□□□ -0.98
BRCC3-209ENST00000620502 TNNT2P45379 298 aaPredicted RBP8.91□□□□□ -0.98
BRCC3-209ENST00000620502 BCAMP50895 628 aa8.91□□□□□ -0.98
BRCC3-209ENST00000620502 SAMD7Q7Z3H4 446 aa8.91□□□□□ -0.98
BRCC3-209ENST00000620502 CCDC125Q86Z20 511 aa8.91□□□□□ -0.98
BRCC3-209ENST00000620502 CDCA7Q9BWT1 371 aaPredicted RBP8.91□□□□□ -0.98
BRCC3-209ENST00000620502 IRF6O14896 467 aa8.9□□□□□ -0.98
BRCC3-209ENST00000620502 ZEB1P37275 1124 aaPredicted RBP8.9□□□□□ -0.98
BRCC3-209ENST00000620502 PDE3BQ13370 1112 aa8.9□□□□□ -0.98
BRCC3-209ENST00000620502 DDB1Q16531 1140 aa8.9□□□□□ -0.98
BRCC3-209ENST00000620502 NBPF6Q5VWK0 638 aa8.9□□□□□ -0.98
BRCC3-209ENST00000620502 MORC1Q86VD1 984 aa8.9□□□□□ -0.98
BRCC3-209ENST00000620502 LRCH3Q96II8 777 aa8.9□□□□□ -0.98
BRCC3-209ENST00000620502 NBPF4Q96M43 638 aa8.9□□□□□ -0.98
BRCC3-209ENST00000620502 HCSTQ9UBK5 93 aa8.9□□□□□ -0.98
BRCC3-209ENST00000620502 SMG6Q86US8 1419 aaKnown RBP8.89□□□□□ -0.99
BRCC3-209ENST00000620502 NPC1L1Q9UHC9 1359 aa8.89□□□□□ -0.99
BRCC3-209ENST00000620502 RCCD1A6NED2 376 aa8.89□□□□□ -0.99
BRCC3-209ENST00000620502 EXOC5O00471 708 aa8.89□□□□□ -0.99
BRCC3-209ENST00000620502 PPM1GO15355 546 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms