RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 TNRC18O15417 2968 aaPredicted RBP8.27□□□□□ -1.09
SSX4B-202ENST00000619890 MEGF6O75095 1541 aa8.26□□□□□ -1.09
SSX4B-202ENST00000619890 A0A0G2JLW4 131 aa8.26□□□□□ -1.09
SSX4B-202ENST00000619890 TGFB2P61812 414 aa8.26□□□□□ -1.09
SSX4B-202ENST00000619890 RRS1Q15050 365 aaKnown RBP8.26□□□□□ -1.09
SSX4B-202ENST00000619890 VSIG10Q8N0Z9 540 aa8.26□□□□□ -1.09
SSX4B-202ENST00000619890 TMEM106CQ9BVX2 250 aa8.26□□□□□ -1.09
SSX4B-202ENST00000619890 PANK3Q9H999 370 aa8.26□□□□□ -1.09
SSX4B-202ENST00000619890 KNSTRNQ9Y448 316 aa8.26□□□□□ -1.09
SSX4B-202ENST00000619890 KAT6BQ8WYB5 2073 aa8.26□□□□□ -1.09
SSX4B-202ENST00000619890 NPC1L1Q9UHC9 1359 aa8.25□□□□□ -1.09
SSX4B-202ENST00000619890 CCDC85CA6NKD9 419 aa8.25□□□□□ -1.09
SSX4B-202ENST00000619890 LBX1P52954 281 aa8.25□□□□□ -1.09
SSX4B-202ENST00000619890 TPRNQ4KMQ1 711 aa8.25□□□□□ -1.09
SSX4B-202ENST00000619890 AMIGO3Q86WK7 504 aa8.25□□□□□ -1.09
SSX4B-202ENST00000619890 MKRN1Q9UHC7 482 aaKnown RBP8.25□□□□□ -1.09
SSX4B-202ENST00000619890 WASHC2AQ641Q2 1341 aa8.25□□□□□ -1.09
SSX4B-202ENST00000619890 PXDNLA1KZ92 1463 aa8.25□□□□□ -1.09
SSX4B-202ENST00000619890 FCHSD2O94868 740 aa8.24□□□□□ -1.09
SSX4B-202ENST00000619890 VEGFAP15692 232 aaPredicted RBP8.24□□□□□ -1.09
SSX4B-202ENST00000619890 DCAF8Q5TAQ9 597 aa8.24□□□□□ -1.09
SSX4B-202ENST00000619890 PLSCR2Q9NRY7 297 aa8.24□□□□□ -1.09
SSX4B-202ENST00000619890 EMILIN1Q9Y6C2 1016 aa8.24□□□□□ -1.09
SSX4B-202ENST00000619890 AIDAQ96BJ3 306 aa8.23□□□□□ -1.09
SSX4B-202ENST00000619890 LTV1Q96GA3 475 aaPredicted RBP8.23□□□□□ -1.09
SSX4B-202ENST00000619890 WBP1LQ9NX94 342 aa8.23□□□□□ -1.09
SSX4B-202ENST00000619890 RNF181Q9P0P0 153 aa8.23□□□□□ -1.09
SSX4B-202ENST00000619890 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.22□□□□□ -1.09
SSX4B-202ENST00000619890 DPEP1P16444 411 aa8.22□□□□□ -1.09
SSX4B-202ENST00000619890 KCNA3P22001 575 aa8.22□□□□□ -1.09
SSX4B-202ENST00000619890 HMGB2P26583 209 aaKnown RBP8.22□□□□□ -1.09
SSX4B-202ENST00000619890 HSP90AB2PQ58FF8 381 aa8.22□□□□□ -1.09
SSX4B-202ENST00000619890 PAXIP1Q6ZW49 1069 aaPredicted RBP8.22□□□□□ -1.09
SSX4B-202ENST00000619890 MORC1Q86VD1 984 aa8.22□□□□□ -1.09
SSX4B-202ENST00000619890 RAPGEF4Q8WZA2 1011 aa8.22□□□□□ -1.09
SSX4B-202ENST00000619890 CFAP44Q96MT7 982 aa8.22□□□□□ -1.09
SSX4B-202ENST00000619890 POLKQ9UBT6 870 aa8.22□□□□□ -1.09
SSX4B-202ENST00000619890 PCDH11XQ9BZA7 1347 aa8.22□□□□□ -1.09
SSX4B-202ENST00000619890 PCDH11YQ9BZA8 1340 aa8.22□□□□□ -1.09
SSX4B-202ENST00000619890 LY75O60449 1722 aa8.21□□□□□ -1.09
SSX4B-202ENST00000619890 TOGARAM1Q9Y4F4 1720 aa8.21□□□□□ -1.09
SSX4B-202ENST00000619890 PPM1GO15355 546 aaPredicted RBP8.21□□□□□ -1.1
SSX4B-202ENST00000619890 PHF14O94880 888 aa8.21□□□□□ -1.1
SSX4B-202ENST00000619890 PYGBP11216 843 aa8.21□□□□□ -1.1
SSX4B-202ENST00000619890 PLCG2P16885 1265 aa8.21□□□□□ -1.1
SSX4B-202ENST00000619890 TATP17735 454 aaPredicted RBP8.21□□□□□ -1.1
SSX4B-202ENST00000619890 FBLN1P23142 703 aa8.21□□□□□ -1.1
SSX4B-202ENST00000619890 GSE1Q14687 1217 aa8.21□□□□□ -1.1
SSX4B-202ENST00000619890 LCE2DQ5TA82 110 aaPredicted RBP8.21□□□□□ -1.1
SSX4B-202ENST00000619890 NBPF6Q5VWK0 638 aa8.21□□□□□ -1.1
SSX4B-202ENST00000619890 NBPF4Q96M43 638 aa8.21□□□□□ -1.1
SSX4B-202ENST00000619890 PDE4DIPQ5VU43 2346 aa8.2□□□□□ -1.1
SSX4B-202ENST00000619890 GLTPD2A6NH11 291 aa8.2□□□□□ -1.1
SSX4B-202ENST00000619890 MMP10P09238 476 aa8.2□□□□□ -1.1
SSX4B-202ENST00000619890 HSPA8P11142 646 aaKnown RBP8.2□□□□□ -1.1
SSX4B-202ENST00000619890 VEGFBP49765 207 aa8.2□□□□□ -1.1
SSX4B-202ENST00000619890 IRX5P78411 483 aaPredicted RBP8.2□□□□□ -1.1
SSX4B-202ENST00000619890 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.2□□□□□ -1.1
SSX4B-202ENST00000619890 POTECB2RU33 542 aa8.19□□□□□ -1.1
SSX4B-202ENST00000619890 PER1O15534 1290 aaPredicted RBP8.19□□□□□ -1.1
SSX4B-202ENST00000619890 TNNT2P45379 298 aaPredicted RBP8.19□□□□□ -1.1
SSX4B-202ENST00000619890 ZCRB1Q8TBF4 217 aaKnown RBP8.19□□□□□ -1.1
SSX4B-202ENST00000619890 DCAF5Q96JK2 942 aa8.19□□□□□ -1.1
SSX4B-202ENST00000619890 AK7Q96M32 723 aa8.19□□□□□ -1.1
SSX4B-202ENST00000619890 KDRP35968 1356 aa8.19□□□□□ -1.1
SSX4B-202ENST00000619890 CNTNAP1P78357 1384 aa8.19□□□□□ -1.1
SSX4B-202ENST00000619890 ITGB4P16144 1822 aa8.18□□□□□ -1.1
SSX4B-202ENST00000619890 SSFA2P28290 1259 aa8.18□□□□□ -1.1
SSX4B-202ENST00000619890 EIF4A2Q14240 407 aaKnown RBP8.18□□□□□ -1.1
SSX4B-202ENST00000619890 USHBP1Q8N6Y0 703 aa8.18□□□□□ -1.1
SSX4B-202ENST00000619890 FAM163AQ96GL9 167 aaPredicted RBP8.18□□□□□ -1.1
SSX4B-202ENST00000619890 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.18□□□□□ -1.1
SSX4B-202ENST00000619890 PIM2Q9P1W9 311 aa8.18□□□□□ -1.1
SSX4B-202ENST00000619890 COL3A1P02461 1466 aaPredicted RBP8.18□□□□□ -1.1
SSX4B-202ENST00000619890 ECM2O94769 699 aaPredicted RBP8.17□□□□□ -1.1
SSX4B-202ENST00000619890 ZEB1P37275 1124 aaPredicted RBP8.17□□□□□ -1.1
SSX4B-202ENST00000619890 ZNF467Q7Z7K2 595 aaPredicted RBP8.17□□□□□ -1.1
SSX4B-202ENST00000619890 EYA1Q99502 592 aa8.17□□□□□ -1.1
SSX4B-202ENST00000619890 SPG7Q9UQ90 795 aa8.17□□□□□ -1.1
SSX4B-202ENST00000619890 ZC3H4Q9UPT8 1303 aaKnown RBP8.17□□□□□ -1.1
SSX4B-202ENST00000619890 C5P01031 1676 aa8.17□□□□□ -1.1
SSX4B-202ENST00000619890 TNRC6CQ9HCJ0 1690 aaKnown RBP8.17□□□□□ -1.1
SSX4B-202ENST00000619890 CHRM1P11229 460 aaPredicted RBP8.16□□□□□ -1.1
SSX4B-202ENST00000619890 DALRD3Q5D0E6 543 aaKnown RBP8.16□□□□□ -1.1
SSX4B-202ENST00000619890 ZNF831Q5JPB2 1677 aa8.16□□□□□ -1.1
SSX4B-202ENST00000619890 OCEL1Q9H607 264 aa8.16□□□□□ -1.1
SSX4B-202ENST00000619890 KIAA1551Q9HCM1 1747 aa8.16□□□□□ -1.1
SSX4B-202ENST00000619890 N4BP2Q86UW6 1770 aaPredicted RBP8.15□□□□□ -1.1
SSX4B-202ENST00000619890 PALLDQ8WX93 1383 aa8.15□□□□□ -1.1
SSX4B-202ENST00000619890 CC2D1BQ5T0F9 858 aaKnown RBP8.15□□□□□ -1.1
SSX4B-202ENST00000619890 NLGN1Q8N2Q7 840 aa8.15□□□□□ -1.1
SSX4B-202ENST00000619890 CCDC87Q9NVE4 849 aa8.15□□□□□ -1.1
SSX4B-202ENST00000619890 PCDHB8Q9UN66 801 aa8.15□□□□□ -1.1
SSX4B-202ENST00000619890 VIRMAQ69YN4 1812 aaKnown RBP8.15□□□□□ -1.11
SSX4B-202ENST00000619890 SCN11AQ9UI33 1791 aa8.15□□□□□ -1.11
SSX4B-202ENST00000619890 ADAMTS7Q9UKP4 1686 aa8.14□□□□□ -1.11
SSX4B-202ENST00000619890 HSP90AB1P08238 724 aaKnown RBP8.14□□□□□ -1.11
SSX4B-202ENST00000619890 MAP2K1Q02750 393 aaPredicted RBP8.14□□□□□ -1.11
SSX4B-202ENST00000619890 NKX1-1Q15270 411 aaPredicted RBP8.14□□□□□ -1.11
SSX4B-202ENST00000619890 AMOTQ4VCS5 1084 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms